Asterias amurensis (Northern Pacific seastar): 139943632
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Entry
139943632 CDS
T10870
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
139943632
3'-5' decay
Other 3'-5' decay factors
139943632
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139943632
NCBI-ProteinID:
XP_071796445
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Position
11:complement(7945072..7980349)
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AA seq
1897 aa
AA seq
DB search
MDSRHKQIHDKANDRYLRQQYHEAAELFSQALGCIRPSASNQHRELQLSYLNKRSMCYLK
LEQYEETLTDCNQLLSLSQNRSGTAKALTRKTQALSKLGRIKEGYEAAKAWTIAEPKNPQ
ASKEMNRLKKAWQHMGGAVEKTVNNVGSTHTTTTRPLPGKSRTVHTSASNMGTGAAPSQN
RERNASGEGKQKLRTSKSADSKFYCSYCDVQCATDVDLHLHCMGQSHQAIIMSDDGRDWK
YRPPPRGITGVDYILCLDRNKCRFGDQCTAAHSDDELGEWRERYKYREMKLKRAKEKQLH
GISYADQLLEKWMTSTVPLDVVTEALDDVKVTVNSGLNVSVTSKSSVHSWVFTLHSKPSK
MLHRIALLYDIHRPHFSISSVSLGDAKRQVPQQLSDNCQEWTNLNNNNQFAGKSKERLYR
IKLQFTSQIFGTFRQSIVFDFGSEPALMQRISVDAVSMACQKELEDVRATLTCVSERWDA
SNKSIEEFSPKVPYGMEEDKGLLSFYVAPHSAEELFHNSVLNKTLTKNNYRAKMHDLLNI
EEVARFKDLSKFNIRTTLQLSSSFHLVPSRNVGARYSVDGQLFALLRLNDELSEDTRGGK
LILNSCSSVLLAPTQEGKSPRGKGAEKAVPEVVYECAIAEKGKGEIYLTIPKKCVDELKL
TTDMEMKVELQFQLNRLPLCEMHYAVDKQPDMTLLFPNVRNAPNIPWTPSKQWDQSMDPR
LNAKQREAIIAMTSPLNNHLPPIFLVGPYGTGKTFTLAHATKLILQQKNTRILICTHSNS
AADLYIKDYLHSYVESGFNAARPLRIYFKNRWVPTVHPLVRLYCIMSEAGDKFLMPSKEE
VMKSRVVVATLSTSRFLSHLDLGQDFFTHILIDEAAQAMECETIMPMALANQNTRIVLAG
DYMQISPEVHSSFARERNLHISLLERLYDLYPAQHPCKILLCENYRSHEAIVQYTSKLFY
DNKLLCSGKQLPHKTWHPLTFFTARGEDVQEKNSTSFYNNAEVFEISERVSELQKSWPVD
DWGNLDEMSIGVVSHYSDQVFRIRSELRKRRLHNVSVERVMNVQGKQFRVLFISTVRTRN
TCKATTKTKSPKSKKRGEMSTSEDEEDADYGFLSNDKLLNTAITRAQSLVAVVGDPVSLC
SIGKCRILWENFIKAAHESDSLFGITYEEIRAQLSGVEMKKTYNLNPLAKEFIPQALRNQ
MTGAPMIQGAGLHGAGLPGHGLPRGMLSPNQSAIPTSLTAGMNASFRAITGMPYGPGMVR
PGSPIPTFDPVTGRMFMMPMSYMMPMHPLRMLPGHQLYHQGAYIDPSTGLPMVMPPYGFP
HMMRHSPTHLASGSSPQLSPKQQSDKSSHPGSPKESPNANSNWQAGASHARERKSSGSEA
SSTKSTLSEQQETVAKLQELRINEEYNYYLRTMGPDYASKFLSKHSPKQQQQQQQQQQQQ
QQQQQHQQQQNVHHQTGAEQPGQPPPLAVAAEALHRMTHSGRPNHPAHHPLSPQSLHQHH
LQQMRLHQQQQQHQQQQHQQQQQQQQQQQQQQRSGGLHPVPTGATNAQQHAPRPAVQRQL
FENSHPRNTEPWSEFNGTFKGNAAGQEILNMLQQGNRNKIPEEYEREVLQMSNVKPQKEQ
MGGYGLGQHQQQQQPFPQSNNDMQYGINKQPEQSVSGQPIALRASGVHMPRSIYAQQNSH
PPMSNPRQSQQPPVSPNLNHMVNNTDRSRNPSGQNAGFFSTESSFPRLGVQRDLYHETSQ
EDQPNFAFRNEIPANHQAEDLGLDREEPEWVRSNSVVNSRMYMNQGGDYDYTPAESQQLV
SALPPPQHDDHMGLNPNPGSRFSPIGTGAHLDSNSKDDMQPLAASMSYASALRATPKPKL
SKTGFPLEDRGKTASPLMLIKDLGNRQNKDGYYSYFN
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaggcacaagcagatccatgacaaggcaaatgaccgctacctaaggcagcag
taccatgaggcagccgagctgttctcccaggcgctggggtgcatccggccgtcagcctcc
aaccagcaccgggagctccaactctcatacctcaacaaacgctcaatgtgctacctcaaa
ttggagcagtatgaggaaacccttacagactgcaaccagctcctgtccctatcacagaac
cgcagcggtaccgcgaaggccctcacccgcaagactcaggccctgtccaaactgggacgg
atcaaggaggggtatgaggcggccaaagcctggaccatcgctgagccaaagaacccacaa
gcatccaaagaaatgaacagacttaaaaaagcatggcaacacatggggggggctgtagaa
aaaactgtaaataatgtaggaagcacacacaccacaaccaccagacccctaccagggaag
agtaggacagtccacactagtgctagcaatatggggacaggggcagcaccatcgcaaaat
agggagaggaatgccagcggggaggggaaacagaaattaaggacctcaaaatcagcagat
tcaaagttttattgttcatactgtgatgtccaatgtgccactgacgtcgaccttcatctt
cactgcatggggcaatcacaccaggccattatcatgtctgatgatgggagggactggaaa
tatcggcccccacccaggggcatcacgggggtagactacattctatgcttagaccgcaac
aaatgccgcttcggggatcagtgcacagcggcgcactccgacgacgaactcggggagtgg
agagaaagatacaagtacagggagatgaaactgaagagagctaaagagaaacagcttcat
ggcatcagctacgccgatcaactcttagagaagtggatgacctcaactgtacctctagac
gtggttacggaggctttagatgatgtgaaagtgactgtcaactcaggcctgaacgtctct
gttacttcaaaatcttctgtacactcatgggttttcacccttcactctaagccgtccaag
atgcttcataggatagctctcttgtatgacattcaccggcctcattttagcatctccagc
gtgtccctcggtgatgccaagcgtcaggttcctcaacagttgtcggataactgccaggaa
tggaccaatctgaataataacaaccaatttgcgggtaaatctaaggagagactgtatcgc
atcaagctgcagttcacgtctcagatcttcggcacattccgtcagtctatcgtatttgac
tttggcagcgagccggcgctgatgcaacgcatctccgtggacgccgtctccatggcttgc
cagaaggagctggaagacgtacgggcgacgctgacgtgcgtgagcgaacgctgggacgcg
agcaacaaaagcatcgaggagttctcaccgaaggtcccgtacgggatggaggaagacaag
ggcttgctcagcttctacgtagcacctcattctgccgaggaactgtttcacaactctgtg
ctgaataagacgctgacgaagaacaactacagggctaagatgcatgacttattgaacatt
gaagaagtggcacgctttaaggacctcagcaaattcaacatccgaacaaccctccagctc
agctccagttttcacctcgtcccctcccgcaatgtcggcgcccgctactcagtcgatggg
caactcttcgccctcctacgcctgaacgacgagctctccgaagacaccagagggggcaag
ctcatcctgaatagctgcagctcagttctcttagcgcccacgcaggaaggaaaaagcccc
agggggaagggggctgagaaggcagtccctgaggtggtgtatgagtgtgcgatagcggag
aaggggaagggcgagatctacctgacgattccgaagaagtgcgtagatgagttgaagctg
acgacggatatggagatgaaggtggaactacagttccagctcaataggttacccctatgt
gagatgcactatgcagtggacaagcagccggacatgactcttctgtttcccaatgtgagg
aacgctcccaacattccgtggacaccaagcaagcagtgggaccaaagcatggaccctcgt
cttaatgccaaacaacgagaggccatcatcgccatgacgtccccgctcaacaaccatttg
ccacctatattcctggtcgggccgtacgggacggggaaaacgttcacgctagcccacgcc
accaagctgatcctgcagcagaaaaataccagaattctcatctgcacacattcaaacagt
gctgctgatctgtacatcaaagactacctccattcttacgttgaatctgggttcaatgct
gcgcgccctctccgcatctacttcaagaaccgctgggtaccaacggtccatcccctggtc
agactctactgcatcatgtccgaggccggggataagtttctaatgccgtccaaggaggag
gtgatgaagtccagggttgtcgtggcaacgctcagcacctcgcggtttctgagtcatctg
gaccttggccaagatttcttcacacacatcctgatcgatgaggcagcgcaggccatggaa
tgcgagaccatcatgccgatggctctagccaatcaaaacactcgtatcgtgctcgctgga
gactacatgcagatcagtcccgaggtccactcatcctttgccagggagcgcaacctccac
atctccctcttggagcgtctctacgatctctaccccgcccagcatccttgcaagatcctc
ctgtgtgagaactaccgctcccacgaggccatcgtgcagtacacctccaagctgttctat
gacaacaagctgctgtgcagcggcaaacagctgccccacaagacgtggcatccgctcaca
ttcttcacggcgaggggagaggacgtacaggagaagaacagcacttcattttataacaat
gctgaggtatttgagatctctgagagggtttcagagcttcagaagtcctggccggtcgac
gactggggtaacttagacgagatgagcatcggagtagtgagtcactactcagatcaggtg
tttcgtatcaggtccgagttacgcaaacgtcgtctgcacaatgtgtccgtggagagagtg
atgaacgtacagggcaagcagtttcgagtcctgttcatcagtacagtacgcacccgcaac
acgtgcaaagccaccaccaagacaaagtcacccaagtccaagaagaggggagagatgagc
acatcggaagatgaagaggatgctgattacgggttcttgtccaatgacaagcttctgaac
actgccattactagggcacagtccctggttgcggtagtgggagacccggtgtcactctgc
tccattgggaagtgcagaatcctttgggagaatttcatcaaagctgcccatgagagtgat
agtctcttcggcatcacctatgaggagatccgagcccagctctctggtgttgagatgaag
aagacctacaatctgaaccctctcgctaaggagttcattccacaagcattacggaaccag
atgactggtgcccccatgatccaaggagctggactccatggagcgggactaccaggccat
ggactcccaagaggaatgctctcaccaaaccagtctgcaatcccaacgtcactcacagct
ggaatgaatgcatccttccgagcaattactggaatgccctacgggcctggaatggtccgt
ccaggtagtcccatcccgaccttcgatccagtgaccggtaggatgttcatgatgcctatg
tcgtacatgatgcccatgcatccactacgtatgctcccaggccaccagctataccatcag
ggtgcttacatcgaccccagcacggggttacccatggtcatgccaccgtacggattccca
cacatgatgcgccactcaccaacgcacctggccagtggttcctcacctcaactctccccg
aagcagcagtctgacaagtcatcccacccgggctctccgaaggaatcgcccaatgcaaac
tctaactggcaagctggggcatcccacgcgcgggagaggaaatccagcggctcggaggca
agcagcactaaatcgacgctgagcgagcagcaggaaactgtggccaagttgcaggagttg
agaatcaatgaggagtataactactacctgaggacgatgggacctgattatgcaagtaag
ttcctgtcaaagcattctcccaagcagcagcagcaacagcagcagcagcagcagcagcag
cagcaacagcagcaacaccagcagcagcaaaatgtgcatcatcaaactggagcagaacaa
cctggacagcctccaccacttgcagtagcagctgaggcgctgcacaggatgacacattct
ggtcggccgaatcatcctgcccatcatccactaagtccacaatccttgcatcaacaccat
cttcagcaaatgcgtcttcatcagcagcagcaacaacatcagcagcagcaacaccaacaa
cagcaacagcagcaacagcagcaacagcagcagcagcgctctggtggcttgcatcctgtg
ccgacaggtgcaactaacgcacaacaacatgcaccgcgacctgctgtgcaacgacagctc
ttcgagaacagccatccacgcaatactgagccatggagtgaattcaacggcactttcaaa
ggaaatgctgccggtcaggaaatcttgaacatgctgcagcagggaaatagaaacaagatc
ccagaggagtatgagagggaagtgttacaaatgagcaatgtcaaacctcagaaggaacaa
atggggggctacgggttgggtcaacaccaacagcagcagcagccgttcccccagagcaac
aacgatatgcagtatggcatcaacaagcaaccagaacagagtgtgtcgggtcagcccata
gcattaagggccagtggagttcacatgcctagatcgatctatgcccagcaaaatagccac
ccacctatgagcaatccacggcagagccaacaacccccggttagtcccaatctgaaccac
atggtcaacaacacagaccggtccagaaacccttcaggtcagaacgctggattcttctca
accgaatccagcttcccacggcttggggtgcagcgggacctctaccacgagacctcccag
gaggaccagccaaacttcgccttcaggaatgagatcccggcgaatcaccaggcggaggac
ctaggcctagacagagaagaaccagaatgggtaagatctaattcagttgttaatagcagg
atgtatatgaaccagggcggggattacgattacacaccagcagagtctcagcagctggtg
tcggcactgccgccaccgcagcatgacgaccacatggggctcaacccgaatccaggtagc
cgcttcagcccgatcggcactggtgctcacctggacagcaactcaaaggatgacatgcag
cctttagcagcatcaatgtcgtacgccagcgctctgcgtgccacgccgaagcccaagctc
agcaagacgggattccctctcgaggacagaggcaagacggcctcccccttgatgctaatc
aaagacctcggtaatcggcaaaacaaagatgggtattattcctactttaactga
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