Asterias amurensis (Northern Pacific seastar): 139943646
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Entry
139943646 CDS
T10870
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139943646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamu02000
]
139943646
Transporters [BR:
aamu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
139943646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
ABC2_membrane
AAA_30
RsgA_GTPase
AAA_29
SMC_N
AAA_15
DUF4162
AAA
Sigma_reg_C
Motif
Other DBs
NCBI-GeneID:
139943646
NCBI-ProteinID:
XP_071796474
LinkDB
All DBs
Position
11:9825718..9856143
Genome browser
AA seq
1711 aa
AA seq
DB search
MASFWQQTRALLYRNFMFKRNDKKMLFQEIFLPCLFMASMYGISLSARPQVFNPLEYKDF
QDHSLLNMSFLPNTSSQWAFAPNTPSTQAVMQSVRAYFGSGMPEFLAFDSEAELVGNFTA
QEVPPFSIGVVFNNDFPQDLAVTIRMTYSSTPLTAQGERFTTEQSCRLKNFPVGLNSYNC
PANQYLYSGFAALQVVLQNAVASLHTNETISLPDVSVRMFPKGAFVLTSPTIRVVSSLYY
IMMYLVFIGVLLSVLVYEKEKKIKETMLMMGMNNGPYWLSWFITYTSIILFVSILIAVLS
KYAIQIVLKGNFLILYLIMAGYGLSIVSMAFMFTPFFNKATVAGAVGSLVTLVLSLLYIP
MSLIVGTPSVVKWLLSFLSPVAMALAMDQAIGLDQLGVGIQFDNMGIDGFPPYVVMLYVD
AVLYFLLAIYFDNVVPGAYGRHKPLFFCFMPSYWSRKERNAYGSSSQIDNEVVNNDEGDV
ELVSQEMKGRASIRIRNMKKTFKGPKNKPDIQAVRGMGLDIYEGQITCLLGHNGAGKTTL
INILTGLLAPDSGQATIYGYDIRDPIQLQKVRSMVGVCSQENTLIEALSAREHLRVFAGL
KGIPSENIEEEVNKILKLTLLDDVASTVSKSLSGGQKRKLCVGIALIGNPKVIFLDEPSS
GMDPYSRRELWTLLKSQRHGKVTVLTTHFMDEADILADRKAMMSKGNLRCYGSSLFLKSR
FGIGYHLGMVVDQDIDTERITEIVTSHIPEGKVSRSHGMELAYTLPLKDTNRFPDLFQAL
EEPCKESSSQKTVAQDLGIQTYGVSMTSLEEVFLKLNEEEEAEEAQADDVLGTSDRTPIN
ATGINYNSRDPVLLSVSEIITKPLEPSKYQIKAFCKLLFSQMLRDPGTYFTRVFFPVAYI
VVSVVLQATITFTPPINKNPESLALVPSLYLETSEATPMFDSLTSLLYQDNLAESENISL
LVDQFEQMGIQSDTIANMSTMFSQAPHNMATVVNALGTSSATPGFVALYNDTAMHSLPVI
LGLLNNALVPLQTAGQTFLNMTVFNHPFPQSSSTQSYTFNSGFFLVLFLFMAFSSLPGGF
LVNIVKERQEGVRTQMRVSGVSAGSYWGCHLIIDCTQMYAIALVGVIAIVVIGLALGNSS
LFTVGGLFFFIVFMLLFLPMYAMFAYCISFIFTEYQSAQSGSQLFFTWLPFVFGIPVMMV
DLIADSTIATILHFIFCFLYPPYTLFGGLYYISKVYESAKLGAGVENITFGDYFAFDTLI
IPTILCVLVDLVMVVFLLRFLEIQNTGGNVRDTCFCSQGNVDSVLPNGDQIPDEDDDVEA
ERSRVKEMFEQSGQNEKCAVAAMGIRKEFTEGGGCCAGEESKVKVAVRNLTLSVNEGEVM
GLLGPNGAGKTTSMNVITADTKANRGQIKIAGHDITSSLSDVYQVMGYCPQHDPLFENIT
MREHIETIGMIKGIHPDDAKNVAQHFMDGLEISEHADKKSQELSGGTKRKLCFAMSMLGT
PKIVFLDEPSTGMDPTSKRYVWNTIIASFRKDRGAVLTTHSMEEADAVCSRVGIMVSGKL
VCLGTTQHLKSKYGGGYILEVKLNPGEAYYSMDHSSGQAAQLLNQHLSALDQTIRQVFPA
VEVTETFGERVTYRIPKDGVTSLSEVFKAMEDGKENLHVEEYSFSQATLEQVFIEFAKQQ
REEDETREGTASSSRPGSANNRINASTGEIV
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttctggcagcagacacgtgccttgctgtatcgtaacttcatgttcaagaga
aatgacaagaagatgctgtttcaggaaatttttttgccctgtttattcatggcgagtatg
tacggcatcagtctgtcagcgagaccccaagtgtttaacccactagagtacaaggacttc
caagaccacagtcttctgaatatgtccttcctcccgaacacctcctcccaatgggcgttt
gcacccaacactccaagcacccaagcagtaatgcagagtgttagggcgtactttggatca
ggaatgccagagtttctggcatttgacagcgaagcggagcttgtgggcaactttacagcg
caagaggttccgccgttctccatcggtgttgtgtttaacaatgatttcccgcaggacttg
gctgtgacgatacgcatgacgtactcgtcgacaccgcttaccgctcaaggggagaggttt
actacagaacagtcgtgtcgtctgaagaacttccctgtcggcctgaatagctacaactgc
ccggcaaatcaatatctgtattccggttttgctgctcttcaagttgtccttcaaaatgct
gttgcctcactgcatactaatgagacgatctcacttccggatgtatcggtcagaatgttt
ccgaagggtgcatttgtattaacctctcccactatcagggttgtcagctctctgtactac
atcatgatgtacttagttttcatcggtgtcctcctgtctgtccttgtgtacgagaaagag
aagaagatcaaggaaacaatgctgatgatgggaatgaacaatggcccttactggctgtcg
tggtttataacgtacacctccatcattctctttgtgtcaatcttgattgcggttctgagt
aaatacgccattcagatcgtcctgaaaggcaacttcctcattctgtatctgatcatggct
ggctatggcttgtcaattgtcagcatggctttcatgtttacgccgttcttcaacaaggca
actgtcgctggggcagtgggctctctggtgaccctagtgctctctctcctctatatcccg
atgtcgctgattgtaggcaccccctcggtggtcaaatggctgctgtctttcctctcccct
gtggcaatggccttggcaatggatcaggcaattggattggaccaactgggagtaggtatc
cagtttgataacatgggtatagacggctttcctccatacgtagtcatgctgtatgtagat
gcagtgctgtacttcttgctagcgatctattttgacaatgttgtcccaggagcctatggc
cgacacaagcccctgttcttctgcttcatgccctcgtattggagcagaaaagaacgcaat
gcctatggaagcagttcacaaatagataacgaggtcgtgaataacgatgaaggagatgtt
gagctggtatcacaggagatgaaaggcagggcctcgatcagaattcgcaacatgaagaag
accttcaaaggaccaaagaataagcctgacatccaagcagttagaggtatgggcttggac
atatatgaaggccagatcacttgtcttttaggtcacaacggcgcgggtaaaacaaccctc
atcaacatactgaccggattattagcgccagacagtggccaagccactatctacggctac
gacatccgggatccgatacagttacagaaagtccggtccatggttggggtgtgctcccag
gagaacaccctgatagaggctctatcagcgagggagcacctgagggtctttgctggactg
aagggaattccgtcagagaatatcgaagaggaggtgaacaaaatattgaagttgaccctt
ctagatgatgtggcatccactgtctcaaagagtttaagtggaggacagaaacgcaaactg
tgcgttggaatcgctcttattggcaatcccaaggtgatcttcctagatgaaccaagcagt
ggaatggatccatattcccgtcgagagctttggactctactcaagagtcagcgacacggg
aaggttaccgtactcaccacacacttcatggatgaagctgacatactggcagatcggaaa
gccatgatgtccaagggtaacttaagatgctacggatcttcactcttcctcaagtcaaga
tttgggattggataccatcttggcatggtggtagatcaagatatagacactgaaaggatt
accgagattgtaacgagtcacatcccagagggtaaagtatcacgcagtcacggcatggag
ctcgcctacacactacccctgaaagacactaacaggttccctgatcttttccaagctctg
gaagagccttgcaaggagagttcttcccagaagacagtcgctcaagatcttggcatccag
acctacggggtatccatgacatcccttgaagaagtgtttcttaaactgaatgaggaggag
gaggctgaagaggcacaagctgatgatgttcttggcacttcagatcgtacgccaatcaat
gcgaccggcataaactacaacagtcgagatcccgtcttgttgagtgtcagtgaaatcatc
accaagcctctggagcccagcaagtaccagatcaaagcgttctgtaaactcctcttcagc
caaatgctgcgagatccagggacatactttactcgtgtcttcttccctgtggcctatata
gtagtatcagtcgtcttgcaagcaacgatcacattcacccctcccatcaacaagaaccca
gagagtttggccctggttccgagtctgtacctagagactagtgaagccacacccatgttt
gactcgctcacttccctactgtaccaagacaacctggctgaaagtgaaaatatctcattg
ttggtcgatcagtttgagcaaatgggtattcagagtgacaccatagcaaacatgagtacc
atgttttctcaagcgccacacaacatggccactgtagttaacgccttgggaacgtccagc
gcaacaccaggcttcgttgcactgtacaacgacactgccatgcattccctgccagtcata
ctgggtctactgaataacgccttggtgccgttgcagacagcgggccagaccttcctgaac
atgacagtttttaaccacccattcccccagtcctccagcacgcagagttacaccttcaac
tcaggtttcttcctggtgttgttcctcttcatggctttcagttcactaccaggggggttt
ctcgtcaacatcgtcaaggaacgacaggaaggggtgcggacccaaatgcgagtttcggga
gtcagcgctggtagctactggggttgccacctcatcatcgactgtacccagatgtacgct
attgctctggtgggggtgattgccatcgtcgtcatcggcttggcgctgggcaactcttct
ctctttaccgtcggagggctgttcttttttatcgtgttcatgctcttgttcttaccgatg
tacgcaatgtttgcgtattgtattagcttcatctttactgagtatcagagcgcgcagagt
ggatcgcagctgttttttacatggcttccttttgtttttggcattcctgttatgatggtt
gatctaattgcggactcgaccatagcaaccattcttcacttcatcttctgttttctgtat
ccaccgtatactctcttcggtgggctgtattacatcagtaaggtgtatgaatccgccaaa
cttggagccggcgtggagaatatcacctttggagactactttgcgtttgacaccctcatc
atccctacaatactgtgtgttctagtggatttggtcatggtggtgttcttgctgcgcttc
ttggagatccagaacacaggaggcaacgttagagatacgtgtttctgcagtcaggggaat
gtagactcagtcctcccaaatggggatcagatcccagatgaggatgatgatgtggaagca
gagagaagcagagtcaaggagatgtttgagcagagtggtcagaatgagaaatgtgctgtt
gccgccatgggcattcgcaaggagttcaccgagggtggaggctgctgcgctggggaggaa
tccaaagtcaaggtcgctgtgcgtaatctgacactctcggtgaatgaaggtgaagtcatg
ggtctactggggcccaacggcgctggtaaaaccacctccatgaatgtcattactgctgat
actaaagccaacaggggacagattaaaattgccggccatgacatcacctcttccctgagt
gacgtataccaggtgatgggttattgcccccagcatgatcctctgtttgaaaacatcacc
atgcgtgagcacattgagaccatcggaatgatcaaaggaatacatccagatgatgctaaa
aatgtagcccaacatttcatggatggtcttgagatctcggagcatgctgataagaagtct
caggagttgtctggaggaactaagaggaagctttgttttgccatgagcatgcttggaacc
cccaagattgtgttccttgatgaaccctctaccgggatggatccaacatctaagagatac
gtctggaacaccattattgcaagtttccgcaaggaccgaggggcggtcctcacgactcat
tccatggaagaggcggacgcagtgtgctctcgagttggaatcatggtctctgggaagttg
gtatgtctaggaaccacccagcacctgaagagcaagtacggcggaggatacatccttgaa
gtgaagctcaacccaggggaagcctactactctatggaccattccagcggacaggcagcc
cagcttcttaaccaacacctctcagcattggaccagaccattcgacaggtctttcctgcc
gtggaggttacagagactttcggggagcgtgtgacgtaccgcatcccgaaggatggtgtt
acttcattgtcggaagtcttcaaggcgatggaagatggcaaagagaacctccatgttgaa
gaatacagcttcagtcaagctacgctagaacaggtgttcatcgagttcgctaagcagcaa
cgtgaagaagatgagactcgtgaaggcactgcgtcaagttcacgtccagggagtgcaaac
aacagaatcaatgcaagtacaggagagatagtctag
DBGET
integrated database retrieval system
