Asterias amurensis (Northern Pacific seastar): 139943666
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Entry
139943666 CDS
T10870
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139943666
Membrane trafficking [BR:
aamu04131
]
Protein recycling
Others
Retriever complex
139943666
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Gene cluster
GFIT
Motif
Pfam:
Vps35
RIG-I_C
Motif
Other DBs
NCBI-GeneID:
139943666
NCBI-ProteinID:
XP_071796501
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Position
11:14141583..14173504
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AA seq
978 aa
AA seq
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MATYEWYSRPRNYNGERKACALQSEPTLDHPLKPVTISQVKKIGRGSTNAKKQSPKPSPA
LDPLATTMEGLDPLSQFAAAAAVKVVDPLSLGTSPSPDTTDAGGALAQHKLDDSFEPWSS
KKATILSKYTTSEKLSITTSFLSAGGREKVTVKSQPAAQSTVTDKVKNRLEQLDDFEEGS
VKEMLNLSQQDYVNRINELNQALITSWDQDQKVKALKIAIQCSKLLADTSVIQFYPSKYV
LITDILDTFGKLVYDRIRRKSTYIPSGSSTPQMLPENFAPHQVPDSAKETCRNWFFKIAS
IRELIPRLYVEAAIMSCYSFLTTGEYEQALLRLTSQMRGIGDPLVAIYARAYLCRVGVAV
APNVRTHLINNFYDFLSSYSQLQSDSVQNILAIQRLEMSSYLSLYSPALDWILQCIAHHA
TEDILTEILGKCKKQCNNALLLNSIMSAFKPEFIASRALGFTDIIKECEEAGFPKHHLYR
SLGTNLAMADPPQQQRLSVLNEVWKAIMKLRTPEDYISCAEVWIEYPCRHFGKKEVNTIL
GDIIKHMNPDRAFESFYPQLQSVMSKVLSHIKDFSILLSMDKFMPMVDMFQRDVVKVELC
RYIMDAFCRNQEEATNDPVIINALMFVCKTMHDSINALSLEDDVRDIGRLLSGFIRKISF
GRDFEQQLSFYVECRANFSNIDSVLVTLVQCVNQLAAETRTVMKGNHSRKTAAFVRACAA
YCFITIPSIADIFHRLNLYLLSGQVAMLNLALTQADAFFKGAISLMPDVPRSMVIDKKTR
STEPFILSYLNSFLCTLLVVPDNPDYGVLYLVRGLLNVIQDYVWDVDTDAKATVFLNVLC
LLSACSQEQFIYHIKNVDSNDVLYGSDKKFLTEVSTVCGTLITSILEHCKALGQSQAGQK
RQSQLALDFFNRILIHGDLSQAEISSLALNLWNLAQKHGHTDTKQMVRTLEYVKGKGSQA
GGKVYKELATSMPLQSRT
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttacgagtggtactcccgtcccagaaactacaatggggagcggaaagcttgc
gcacttcaatctgaaccaaccttggaccatcctttaaaacctgtcacgatctctcaggtg
aagaagattggaagaggtagtactaatgctaagaaacagtctcccaagccttcgcctgcc
ctagaccctctagccaccaccatggagggactggatccactctctcagtttgctgctgct
gctgccgtcaaggttgttgatccattatctcttgggacatcaccaagtccagacacgact
gacgcaggaggagcattagcgcagcataaacttgatgattcatttgagccttggtccagc
aagaaagccaccattctaagcaagtacaccacctcagagaaactttccatcactacgagc
tttctttctgctggaggaagagaaaaagttaccgtcaagtctcagccagcagcccagagc
acagtcacagacaaagtgaagaacagactagagcaacttgatgattttgaagagggctct
gtgaaagagatgctgaacttgagccaacaggactacgttaatcgaattaatgagttgaat
caagctttgattacatcgtgggatcaggatcagaaagtgaaggcactcaagattgccata
cagtgttccaagttacttgcagacacatcagtaattcaattctaccccagcaagtacgtc
ctgatcactgacatactagacaccttcggtaagcttgtgtatgatcgcatccggcgtaag
tcaacctacatcccatcggggagttccactcctcagatgcttccagagaactttgctcct
catcaagtaccagactctgctaaagagacttgtcgtaattggttcttcaagattgcctct
atcagggagctcattccaagactttacgtagaggctgccattatgagttgctacagcttc
ttaacaactggtgagtatgagcaggccttactgagactcacaagccaaatgagaggaatt
ggagatccattggtcgctatctacgctagagcttacctatgtcgtgtgggtgtggcagtt
gctcctaatgttcgcacacacttgatcaataacttttatgacttcctgtcctcctactcc
cagcttcagagtgacagtgttcagaatattctagctattcaacgtctggagatgtctagt
tacctgtctctgtactcaccagccttagattggatcctccagtgtatagctcatcatgct
acagaggatatcttgactgagatacttggcaagtgcaagaagcaatgtaacaatgcccta
ttgctgaattccatcatgtcagctttcaaacctgagttcattgcgagtagagccttgggc
ttcactgacataatcaaggaatgtgaggaggctggattccctaagcatcacctttatcgg
tcactcggtactaacctagcgatggcagatccaccccaacaacaacgactttctgttctg
aatgaagtctggaaggcaatcatgaaactacgcacgccagaggattacatcagctgtgct
gaggtttggattgagtatccatgcagacacttcggtaaaaaagaagtgaatacaatcttg
ggtgacatcatcaagcacatgaatccagatcgcgcttttgaatccttctaccctcagtta
caatctgtgatgtccaaagttctgtcacacatcaaggacttctcaatcttgctctccatg
gataagtttatgccgatggtagacatgttccagcgagatgtagtgaaagttgaattgtgt
cgttacattatggatgcattctgtcgtaaccaagaagaagcaaccaacgatccagtcatc
atcaacgctctcatgtttgtctgtaagacgatgcatgactccatcaatgctctgtctctt
gaagatgatgtcagagacatcggaagacttctctccggattcatcagaaagatctccttt
ggacgtgactttgagcagcagctgagtttctatgtggagtgtcgagccaacttcagtaac
attgacagcgttcttgtcacactcgttcagtgtgtgaatcagctagctgcagagacccgt
accgtcatgaagggaaaccactctaggaagactgctgcctttgtcagggcatgtgctgca
tattgcttcatcaccatcccttcaatcgcagatatcttccatcggctcaacttataccta
ctctctggtcaggtggccatgctgaacctagcacttacccaagccgatgccttctttaag
ggtgccatcagcttgatgccagatgttcctaggtctatggtgattgataagaagacaaga
tccactgagccgttcatcttgagttacctcaacagcttcctgtgtaccctcctcgttgta
ccagataacccagactatggagtgctatatttggttcgaggtctactgaatgttatacag
gattatgtatgggatgtagacacggatgctaaagccacagtgttcctgaatgtgctatgt
ttgctgtcagcttgtagccaggaacagtttatctatcacatcaagaacgttgactcaaat
gatgttctttatggcagtgacaagaagttcctgacagaagtttcaactgtttgtgggact
ctgatcacctccatacttgaacactgcaaagcactgggacagtcacaggctggtcagaag
aggcagtctcaactcgctttagacttcttcaaccgtatcttgatccacggtgatttatct
caagctgagatatcctcattggcactcaacctctggaatctagcccagaaacatggacac
accgacaccaaacaaatggtgcgaactctagagtatgtcaaaggcaaaggaagtcaggct
ggaggtaaagtctacaaagaacttgcaacatcaatgcccctgcagtcaaggacataa
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