Asterias amurensis (Northern Pacific seastar): 139943747
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Entry
139943747 CDS
T10870
Name
(RefSeq) spectrin beta chain-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04820
Cytoskeleton in muscle cells
Brite
Cytoskeleton proteins [BR:
aamu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139943747
Intermediate filaments
Intermediate filament-binding proteins
139943747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
139943747
NCBI-ProteinID:
XP_071796628
LinkDB
All DBs
Position
1:complement(5887999..5947864)
Genome browser
AA seq
2350 aa
AA seq
DB search
MVDNDVQMDIEADIDDAGGAKLFERSRIKALADEREMVQKKTFTKWVNSHLQRVSCRIVN
LYTDLRDGRMLIKLLEVLSGERLPKPTKGKMRIHCLENCDKALQFLKEKKVHLENMGSHD
ITDGSHRLTLGLIWTIILRFQIQDISFEDEDNQETRSAKDALLLWCQMKTAGYANVNIRN
FTTSWRDGLAFNALIHKHRPDLIEYQKLTKSNPIHNLNNAFNVAEQKLDLSKLLDPEDIN
VDHPDEKSIITYVVTYYHCFSKMKVETVSSKRIGKVITTAIDNDKLITEYDKITSDLLQW
IEQTIMILNDRTFSNNLQGLQQQLLAFSTYRTVEKPPKFVEKGNLEVLLFTIQSKMRANN
QRPFTPKEGKLVHDINKSWERLERAEHERELALRQELIRQEKLEQLAARFDRKAAMRETW
LSENQRLVAQDNFGYDLPAVEAAAKKHEAIETDIYAYQERVLAVVAVAQELDEEKYHDNE
RIIARKDNVLRLWDYLIELLKGRRSRLDLSVEVQRIFQEMLLLLDSMEETKVLLLSEDLG
KHLMGVEDLLQKHALLEADVAGYGDRVNTVNHQASKYMNPKGPDGSGYQPVDPQIVADRM
THLEESYQELLELARGRKDRLGESRKLWQFFWDLADDENMIKEQAQIMKSTDIGHDLTSI
NLLIKKQKAQEDELVGRHAQLMANIKVGEDLIAKEHFGAPQIQSRIAKVKDDWTNLEALC
KQRRDRLNEAQDMYQFFADADDVDTWMLDTLRLVSSEDVGRDEPSVESLLKKHKEVYIAN
PKPGEITTELQNYTAVIDGLHTQAQELGEQDRDSPEVQARLGTINRRYKELLELAKLRNQ
RLLDALSLYKLFNEADTVEAWIDEKEQTLNSVIPLEDLESNDVILTRFDRFEKEMEINAP
KVAVVNQLARQLLHVEHPNSQEITSKQNHLNQRWAALRVLLEERRDAVIAVREVQTYHIE
CIETTTWIKDKARLIEATKDLGNDLTGIMALQRRLKGMESDLAAIEAKLESLDKESEKLA
QEHPEDAEEIRHRYNLIIEIWEELKELLKTREAALNEAGDLQQFLRDLDEFQAWLSKTMT
AVASEDIPESLKEAEKLLNKHAAIKDEIDGYEENYGKMKEQGDRITEGQTDTQYMFLKQR
LQALDDGWIELHQMWDNRQLLLSQALNHQMFLRDARQVDHILNQQENFLAKVEQPNSLEA
CDDAIKRYETFLSQMDTNDEKINTVLSFGQRLCDEDHYAADKINKKAENIDERRKANRDA
AEGTLNRLKDNRLLQSFLQEADELGIFLVEKTVIAQEETYDEARSLHGKWQKHQAFEAEL
SANKERLEKLKEHGDELTKEKPEVEEVVAKRLADLDHSWNDLEVMTDDKGKKLFEANSQH
LFTESCNDFDNWLTDLETQLGHEDPAQDLKSVMMAIKQQQLVENLVTVKKNEVNQLQAQV
CTDNIEEMEKITVKKVQVEERFISMAEPLTHRSNALHAQRRALELLRDIDDEKMWITMKM
PQATSTDIGNSLQAVQTLQKKNNSLKVEIDGHEVRITELCNRAKEIVAEGHPQGDKINQG
VNELQDMWQQLLDAMKDRKEKLIDSEKAQQYYFNAAEAEAWMSEQELYMMGEERAKDDAN
AQGMLKKHTILESAVEDYAETINELSHEAKQLVDETHPQSDQIAIRQSQIDKLYAGLKDL
AEERRGRLEETTKLFQLNREVDDLEQWIAEREVVAGSHELGQDFEHVTMLQERFEEFSRE
TRNIGTQRVANVNRIADNLIEAGHTDSSIIAEWKDQLNESWADLLELMETRTMMLAASYE
LHKFYYDAKEVLGRLQEKHQEMSGDLGKDAQSVTVLQRKHITFQSDLNSLQVQVEGVQEE
AQRLRASYAGDKEREINNREQEVLDAWNNLKTDITGRSLKLDHTSDLYRFLNMVRSLMLW
MDDIILQITSQERARDVSGVELLMNQHQNVKAEIDTRDDSFTECFNLGKEMLGKNHYASK
EIHGKLVGVGTRRQDMINEWEHRWEFLQLILEVYQFARDAHVAEAWLISQEAYLRNTDYG
NSLDEVEKLIKKHEAFEKALQAQEDRFIALEKLTTFELRELRRRQDEERRAAGQESPPMR
ESPSLKHKVVDDFMKEQLEVERQEEEERIRMEQKEIRQAAEEMVQQAQDIAQEESAPPPP
TPVVTFEPADEGEDKEDAGAVNGEGEPGPSAAAVTASGDDSSFEAEGFLLRKRLWEALDR
KASNRSWTQVYAVQHGISLAFYKDKKSKLQEITFQKEPPIDLTSAEVEVAKDYTKKKHVF
RLKLPGGIEYLFQAKDDDEVNYWIGCIQTAAGGTETGEKRASTMPLDPGSSGKKDKPKAK
GGFFTLGKKK
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atggtggataacgatgttcaaatggacatagaagcagacattgacgatgctgggggagct
aagctctttgagcgctcccgtatcaaggcactcgcagatgagcgtgagatggttcagaag
aagaccttcaccaagtgggtcaactcccatctccagcgcgtatcttgccgcatcgtcaac
ctgtacacagatctgagagatggtaggatgctcatcaaacttctagaagttttatccgga
gagagactgcccaaaccaacaaaaggcaagatgcgaattcactgtctagaaaactgcgac
aaagcgctgcagttcctgaaggaaaagaaggtgcatctggagaacatggggtcacatgac
atcaccgatggtagccatcgcttgacccttggtcttatttggaccatcattctccgattc
cagattcaagacatcagttttgaagatgaagacaaccaagaaacccgctctgccaaggac
gccctgcttctctggtgccagatgaagactgccggctatgccaacgtcaacattcgcaac
ttcaccacgagttggcgggatggtctggccttcaatgccctgatccacaagcacaggccg
gacctgatcgagtaccagaaactgaccaagtccaaccccatccacaacctgaacaatgcc
ttcaatgtagctgagcagaagttggacctgtccaagctgctagacccagaggatatcaat
gttgaccatcctgatgagaagtctatcatcacctacgttgtcacctactaccattgcttc
tccaagatgaaggtagagacggtgtccagtaaacgtattggcaaggtcatcacaacagcc
atcgacaatgacaaactcatcactgagtacgataagatcacctctgacctcctgcaatgg
attgagcagactatcatgatccttaatgataggacgttctccaataacctacagggtcta
caacaacagcttctagccttcagcacgtatcggacagtcgagaaacccccaaagtttgtt
gagaagggcaacttggaggtgctcctgtttaccatacagagtaagatgagagctaacaac
cagaggccattcacacccaaagaaggcaaactggtccatgatatcaacaagtcctgggag
agactagagcgagccgaacatgaacgcgaacttgcactccgccaagagctgatccgacag
gagaaactcgaacagctggccgcacgctttgaccgtaaagctgcgatgcgtgagacctgg
ctgagcgagaatcaacgtctggtcgctcaggataactttggttacgatctaccggctgtg
gaagcagccgccaagaagcacgaggccattgagactgacatctatgcctaccaggagaga
gtgctggctgtggtggccgtagcacaggaactggacgaagagaaataccatgacaatgag
agaattattgcaaggaaagacaatgtgctgagattgtgggattacctgattgagttgttg
aagggacgtcgttctcgtcttgacctgtctgttgaagtacagagaatcttccaggagatg
ctgctacttctggactccatggaggaaaccaaggtgcttctgttgtcagaagacctcggt
aagcatctgatgggagtggaagacttgctgcagaaacatgctctcctagaggctgatgtt
gctgggtatggagatagagttaacactgtcaaccatcaagcatctaaatacatgaatcct
aaaggacctgatggctcaggttaccaaccagtggatccacagatagtggctgatcgtatg
acccacttggaggaaagctaccaggagctgttggagctcgcccgtggccgcaaggaccgt
ctcggagagtcacgcaagctatggcagttcttctgggatctggccgacgacgagaacatg
atcaaggaacaagcccagatcatgaaatccacggacatcgggcacgacctcaccagcatc
aacctactcatcaagaagcagaaggctcaagaagacgagctggtaggtcgtcatgcccag
ctgatggccaacatcaaggtgggtgaagacctgatcgcaaaggagcactttggagctcct
cagatccagtcccgcatcgccaaggtcaaggatgactggacgaacttggaggcactgtgt
aagcagcgccgggatcgtctcaacgaggcacaagacatgtaccagttctttgccgatgcc
gatgatgttgatacctggatgttggatacactccgtctggtctccagtgaagacgtggga
cgtgatgagccaagtgttgagtcactacttaagaaacacaaggaggtctatatagccaac
cctaaacctggagaaatcactaccgagttacagaattacacagcggtgatcgatggtctc
cacactcaagcacaggagcttggcgaacaggaccgcgattcccctgaggttcaagctcgt
cttggtaccatcaaccgtcgctacaaggagctgttggagcttgccaagctgcgtaaccaa
cgtcttctcgatgccttgtctctctacaagctcttcaatgaagcagacacagtggaggcc
tggatcgatgagaaggagcaaacattgaattcagtcataccactagaagacctagaatcc
aatgatgtcatcttgacgcgctttgaccgctttgagaaggagatggagatcaacgctccc
aaggtggccgttgttaaccagcttgcgcgtcagcttctgcacgttgagcatcccaactca
caggagatcaccagcaagcagaatcaccttaaccaacgctgggcagcgttgcgtgttctc
ctggaggagcgtcgtgatgcagttattgcagtgcgtgaggtccagacctatcacattgaa
tgcattgagaccactacatggattaaggataaggcacgtcttattgaagctactaaggat
cttggtaatgacttgactggtatcatggcactacagcgccgtctcaaggggatggagagt
gatctcgctgctatcgaggctaagttggaatctttggacaaggagtctgagaagttggcc
caggaacatcccgaggatgctgaggagatcaggcacagatacaacctcatcattgagatc
tgggaggaactcaaggagctgctgaagaccagggaagctgccctgaacgaagccggtgac
ctccagcagttcctgcgtgacctggatgaattccaggcctggttgtctaagaccatgact
gccgtggcctcggaggacatccctgagagcctgaaggaggctgagaagctcctgaacaaa
cacgctgccatcaaggatgagattgacggctacgaggagaactatggcaagatgaaagaa
cagggagaccgcatcactgagggacagacggatacacagtacatgttccttaagcagcgt
ctccaagcccttgatgatggctggattgagctgcaccagatgtgggacaacagacaactc
cttctttcacaggccctcaatcaccagatgttcctccgcgatgccaggcaggttgatcac
atcctcaaccaacaggagaacttccttgccaaggttgaacagcctaactctcttgaggca
tgtgatgatgccatcaagcgttatgagacgttccttagccagatggataccaatgatgag
aagatcaacacagtactcagctttggacaacgcctctgcgatgaggatcactacgctgct
gataagatcaacaagaaggcagagaatatcgatgagaggcgtaaagccaaccgtgatgct
gccgagggtacactaaaccgtcttaaggacaaccgtctattgcagtccttcctccaggag
gctgatgagctgggtatcttcctagtagagaagaccgtcattgcccaggaagagacctat
gatgaggcacgtagcctccatggcaagtggcagaagcaccaggccttcgaggctgaattg
tctgccaacaaggaacgcctggagaaactcaaagagcatggcgatgagttgacaaaagag
aaacccgaagtggaggaagttgttgccaagcgccttgcagacctagaccattcctggaat
gaccttgaggtcatgacagacgataagggcaagaagctctttgaagccaacagccagcat
ctattcaccgagagttgcaatgactttgacaactggttgactgacttagagacacagctt
ggccatgaggaccctgcccaggatctcaagtctgtcatgatggccatcaagcaacagcag
ctggtagagaatcttgtgacagtgaagaagaatgaggtgaaccagctgcaggcccaggtg
tgcacggataacattgaagagatggagaagatcacagtcaagaaggtgcaagtggaggag
cgtttcatctcaatggctgagccattgactcataggagtaatgccttgcatgcacagagg
agagccctagaacttcttagagatattgatgatgagaagatgtggatcacaatgaagatg
ccccaggccacctccacggacatcggcaacagcctacaggccgttcagaccctacagaag
aagaacaactccctaaaggtggagatcgacggccacgaggtgcgcatcacagagctgtgc
aacagggctaaggagatcgtagcagagggccacccacagggtgataagatcaaccagggt
gtgaatgaacttcaggatatgtggcaacagctcctggatgccatgaaggatcgcaaggag
aaactcatcgactcagagaaagctcaacagtactacttcaatgcagccgaggctgaagcc
tggatgagtgaacaggagctgtacatgatgggagaggagagggctaaggatgatgccaat
gctcaagggatgctcaagaaacacaccatcctggagagtgctgtagaggactatgcagag
actatcaatgaactctcgcatgaagctaaacaactggttgatgaaacccatccacagagc
gatcaaatagctatccgccagtcccagattgacaagctgtatgccggcctgaaggacctt
gccgaggagaggcgagggcgtctggaggagaccactaaactcttccagctcaacagggag
gttgatgacctggaacaatggatcgctgagagagaggtcgttgcaggatcacatgagctt
ggacaagactttgagcatgtcactatgcttcaagagagatttgaagagttctcaagagaa
actcgcaacattggtacacaacgtgttgctaacgtcaaccgaatcgcagataacctgatc
gaggctggccatacagactcctctatcattgccgagtggaaggaccaactcaacgaatca
tgggccgacctgctggaactgatggaaacaagaacaatgatgttggcagcgtcgtatgaa
cttcacaaattctactatgatgctaaggaagtactcggcagactacaggagaaacaccag
gagatgtcaggagatcttggtaaggatgcacagtctgtgactgttctacaacgcaaacac
atcaccttccagagtgatctcaactcactacaagtacaggttgagggtgttcaggaagag
gcgcagaggttgagagcatcctacgccggcgacaaagaacgagagatcaacaaccgggaa
caggaagtattggacgcctggaacaacctgaagacggacatcacaggacgtagtctcaag
ctggatcacactagcgacttgtaccgattcttgaacatggttagatcccttatgctgtgg
atggatgatattatcctccagatcacatcacaggagagagcaagggatgtatcgggtgtt
gagctactgatgaaccaacatcagaatgtcaaggctgagattgacacgagagatgacagc
ttcactgaatgcttcaacttaggcaaagagatgctgggcaagaaccactacgcaagcaaa
gagatccatggaaagttggttggtgttggaaccagacgccaggacatgatcaatgaatgg
gaacaccgttgggaattccttcaactcattcttgaggtataccagtttgctcgagatgcc
catgttgccgaagcatggctgatcagtcaggaagcatacctgaggaatacagactatgga
aattcccttgacgaggtagagaagttgatcaagaagcacgaggcctttgagaaagctcta
caagcccaagaagacagattcattgccttggagaaactcaccacgtttgagttgcgtgag
ctgcgtcgtcgacaagatgaggagaggagagcagccggtcaggaatcacctccaatgaga
gagtcgccttccttgaagcacaaggttgtagatgacttcatgaaagagcaactagaggta
gagaggcaggaggaggaggaacgtattcgcatggagcagaaagagattagacaagcagct
gaggagatggtacaacaagcccaggacatcgcccaggaggaatctgcaccgcccccaccc
actccagttgtcacctttgagcccgctgacgagggtgaagacaaggaagacgctggagca
gttaatggtgagggagagccaggtccatcagcagcggctgtaacggcttcaggagatgac
agctctttcgaggcagagggtttcctgctgaggaaacgcctttgggaagctctggacagg
aaagcatccaacagatcatggacccaagtctatgcagtccaacatggtatctcgctagcc
ttctacaaagacaagaagtcaaaactacaagagattacgttccagaaggagcctccaata
gacttgaccagcgccgaagttgaagtagccaaggactacaccaagaagaagcacgtcttt
agactcaaattgcctggtggtattgagtacttattccaagccaaggatgacgatgaggtg
aactactggatcggctgcatccaaacagcggcaggaggcactgagacaggagagaagaga
gcctcaacgatgcccctagaccccggctcaagcggcaagaaggacaaaccaaaagctaaa
ggtggattcttcactctcggcaagaagaaatga
DBGET
integrated database retrieval system
