Asterias amurensis (Northern Pacific seastar): 139944232
Help
Entry
139944232 CDS
T10870
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03430
Mismatch repair
aamu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139944232
03460 Fanconi anemia pathway
139944232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamu03400
]
139944232
DNA repair and recombination proteins [BR:
aamu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
139944232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
139944232
NCBI-ProteinID:
XP_071797307
LinkDB
All DBs
Position
11:complement(16334834..16350062)
Genome browser
AA seq
913 aa
AA seq
DB search
MMAGSVKAIDRQSVHRICSGQVVLNLATAIKELVENSLDAGATNIDIRLKDYGSEVLEVI
DNGSGVEDNNFQGLTLKHHTSKLRDFSDLSSVDTFGFRGEALSSLCALSNMIVVTCHESA
AVGTRLEYDHDGRLVKQTPCPRQHGTTVTLQNLFSTLPVRHKEFLRNLKKEFTKMAQLLQ
AYGIISSGVKLTCTNQIGQGKRSPVMSTSGNTLLKENIANVFGSKQLQNLMDFAQVTPGS
EQCEEYGLTEHQVQEQLFKITGYVSKSDHGRGRSSADRQYYYINKRPCDFPKVSKLVNEV
YHMYNRHQYPFVVLDISLAKDSVDVNVTPDKRKIFVLEEKSLLAMLKTSLQQIYEPRSSV
YDVNSQMRSSSGAGTGKTETGGLTSLIAARHPPCTGSATEGSRPDYKGLKLTLAGLKRSF
SHAGGSSEINTREIQERVSKQPKLDAFLLKRAKSEPVHQNSTQNNSQSPSQTCSSPSKRS
LLSEEIELSKVAPDDEATDVSQEDHKRSNLFLGTSNFERDLPSSSITDSSDDEKRTLGLQ
NCTSTHSEGDKSNLHVTLPQESGQSEVDICNHLNVLHQSEEAKAAPHCRVLVTDSSTNER
KELEIPVADCSSVAHEAVEKAPKDDEERVSMEVADKEITSCSTTNSKAGALLMDDSKFQR
FSTSSRRKEVKVPFSLDRLTGQLKEQTDASCSSRSFSRTFKAAITPSDNSTAEDELTKNV
SKDMFPCMEILGQFNLGFIIAKHKRDLFIIDQHATDEKYNFEMLQRHTVLQGQRLIQAMP
LELTAVNESILIDNLDIFKKNGFDFAIDEEATPTQRVKLTSLPMSKNWTFGKEDIDEVIF
MLSDAPGVMCRPSRVRQMFASRSCRKSIMIGTALNQREMKKLVCHMTEIDQPWNCPHGRP
TMRHLFNLDMLPD
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgatggctggcagtgttaaagccattgacagacagtctgttcataggatatgctcaggt
caggtggtccttaatctagccacagccatcaaggaactggtggagaactccctggatgct
ggagccacaaatatagatatccgtctgaaagattatggctcagaagtattggaggttata
gacaatggctcaggagttgaggacaacaacttccagggacttacattgaaacatcacacc
tctaagctgagagacttttctgacctaagcagtgttgatacctttgggtttagaggggaa
gccctcagctctctttgtgctctcagtaacatgatagtggttacctgccatgagtcagct
gctgtgggtaccaggttggagtatgatcatgacggcagactggtcaagcagacaccctgc
ccaagacagcatggcactacagtcacacttcaaaatctcttctcaacactaccagtccgg
cacaaggagttcctaaggaatctcaagaaggagttcactaagatggcacagttacttcaa
gcttatgggatcatcagttcaggggtgaagctaacatgcactaatcagataggccagggg
aaacgttcccctgtcatgtcaaccagtggaaatactctactcaaggagaacattgccaat
gtttttgggtcaaagcagcttcagaatctgatggattttgcgcaagtcaccccaggctct
gaacaatgcgaggagtatggactgactgaacatcaagtacaagaacaacttttcaaaatc
acaggttatgtatccaagagtgaccatggtagaggccgaagcagcgctgacagacagtat
tactacattaacaagagaccatgtgattttcctaaggtgtctaagcttgtgaatgaggtg
taccatatgtacaacaggcaccaatacccatttgtggttctggacatctcccttgctaaa
gattctgtggatgtaaatgtcacaccggacaagaggaagatttttgttctggaagaaaag
agcttgttggccatgttgaagacgtcattgcaacagatatacgaaccgcgatcctccgtc
tatgatgtgaactcgcagatgaggtcatcgtctggggctggtacggggaaaacggagact
ggaggactgacaagtctgattgctgccagacatccaccatgcactggatcagccactgag
ggcagtagaccagactacaagggacttaaacttactttggctgggttaaagagatccttc
tcgcatgcaggagggagcagtgaaatcaatacccgagaaatacaggagagagtatccaaa
cagcccaaacttgatgccttccttttaaaacgtgcaaaatcagaaccagtccatcaaaac
tccacacagaataactcacaatctccaagtcaaacatgttcaagtcccagcaaacgttct
ttactcagtgaggagattgagctctcaaaagttgctcctgatgatgaagccacagatgtc
agtcaagaggatcacaaaaggagtaatcttttcctgggaacgagtaactttgaaagagat
ttgccgtcaagttccatcactgactcgtctgatgatgagaaacggactttgggtttgcag
aactgcacctcgacacactcagaaggagataagagcaacctacatgtaactttgcctcaa
gagagtggccaatcggaagtggacatttgcaatcatttgaatgtcctccaccaatcagaa
gaggctaaagcggcaccccattgcagagttttagtgaccgactcgtccaccaatgaaaga
aaagagttggaaattccggttgcagactgcagttctgtggcacacgaagcagttgaaaag
gcacccaaagatgatgaagaacgggtttctatggaagttgcagataaagaaataacatca
tgcagcacgacaaattcgaaagcaggagcgcttttaatggacgactctaaatttcaaagg
ttttcaacatcgtcaagacggaaagaagtaaaggtgccattttcattggacaggctaaca
ggacaactaaaagaacaaacagatgcctcatgtagctcaagatccttcagtcgtacattc
aaggctgccattactccatcggataacagcacggcagaggatgaactcactaaaaatgtc
agtaaagacatgtttccgtgcatggagattttaggccagtttaatctagggttcatcatc
gccaagcacaagagagatttgttcattatcgatcagcatgccactgatgagaagtacaac
tttgagatgctgcaaaggcacacagttctacagggtcagaggttgatacaagccatgcca
ttggagctgacagcagtcaatgagtccatactgatagataacctggacatcttcaagaag
aatggatttgattttgccatcgacgaagaagcaacaccaactcagagggtcaaactgaca
tccttaccaatgagcaagaactggacatttggaaaggaggatattgacgaagtcatcttc
atgttgagcgatgcaccgggagtcatgtgcaggcccagcagagtacgtcagatgtttgca
tcacggtcatgtaggaaatccatcatgattggtacagcgctcaatcagagagagatgaag
aagttggtgtgtcatatgactgaaattgaccagccctggaactgtccacatggtcgaccc
acaatgaggcatttgttcaacttagatatgctaccagactga
DBGET
integrated database retrieval system
