Asterias amurensis (Northern Pacific seastar): 139944335
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Entry
139944335 CDS
T10870
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7-like isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamu04121
]
139944335
Enzymes [BR:
aamu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139944335
Ubiquitin system [BR:
aamu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
139944335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_C
WDR55
Beta-prop_SCAP
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
zf-RING_UBOX
Beta-prop_IP5PC_F
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
WD40_like
Beta-prop_IFT122_1st
zf-TRAF
zf-RING_5
Prok-RING_4
WD40_2
Sina_ZnF
Beta-prop_Nup120_160
zf-RING_2
PKcGMP_CC
TPR_MLP1_2
Beta-prop_HPS5
TRAF3_RING
DUF641
DUF5385
Beta-prop_Vps41
DUF1664
Fib_alpha
CEP63
zf-RING_6
Laminin_II
Motif
Other DBs
NCBI-GeneID:
139944335
NCBI-ProteinID:
XP_071797432
LinkDB
All DBs
Position
11:complement(5456828..5587455)
Genome browser
AA seq
650 aa
AA seq
DB search
MASVTEVSSDLEEESSVITSHMSPSGHSTTLSSASTVALNVSLSGLNVPTSDVAGGTSLA
PVSPSFKSNRGSSTPSYDGDLDMTPEVLVFTEPPNRKLFCILCKNVFKDPVITQCGHTYC
RSCVTSRQHDKCPVDDMKLAVVVNNIAVSEQIGELYIHCRNGCKPSGTGIQDEYQVDPDG
CPCTFRVNERRDHEMECSYAPIQCPNNPDCPKILKMNLEAHLQNCNLCKCDHHKFGCPFF
GTQEEVSDHREVCSYEGIKDYLQTSSERMRELQATIVQKDQEIGFLRSMLGKLSERVDRL
EKSMELKINYLDENMSRMEKSLVELDEQNRSMSDELMDNRRNYSMLNSELSMINARLNSG
AAGVYDPQQVFKCKGTFVGHQGPVWCLCVYGDYLFSGSSDKTIKVWDTCTSYTCQKTLEG
HNGIVLALCTHGNRLFSGSADCTVIVWNIDTLEQEKIIQAHENPVCTLVAANNMLFSGSL
KVIKVWDVHSHELKRELTGLNHWVRALVANGNFLYSGSYQTIKVWDMRTLEIVHSLQTSG
GSVYSIAVTSHHIIAGTYENCIHVWDKASYEQVETLTGHVGTVYALAVISAPGTTRVFSA
SYDRSLRVWNMENMICTQTLLRHQGSVACLAVSRGRLFSGAVDSTVKVWQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtcaccgaagtgagtagcgatttggaggaagaatcatcggtcataacctca
cacatgagtccgagtggccacagtaccaccctgtcctcagcgtctaccgtcgctcttaac
gtctcattaagcggtttaaatgttcctacatctgatgtagcagggggtacgtctctggca
cctgtgtccccgtccttcaaaagcaaccggggctcgtcgaccccgtcctatgatggagat
cttgatatgacgccggaggtgttggtgtttaccgagccccctaatcggaagctcttctgc
atcctatgcaagaatgtcttcaaggacccagtcatcacgcagtgtggacatacctactgt
cgctcatgcgtaacgtccaggcagcatgataaatgccctgtggatgacatgaaacttgca
gtagtggtcaacaacatagcagtgagtgaacagatcggggagctgtacatacactgtcgt
aatggctgcaagccttcggggaccggcatacaggatgagtaccaggtagatccagatggc
tgcccgtgtactttcagagtcaatgaacgcagggaccatgagatggaatgcagctatgca
ccaatccagtgccccaacaacccggactgtcccaagattctgaagatgaatctggaagcg
cacctccagaactgcaacctgtgtaagtgtgaccaccacaagtttggctgcccgtttttc
ggtacccaggaggaggtatctgaccaccgcgaagtctgcagctacgagggtattaaggat
tacctacagacatcatcggagagaatgagggagctacaagccaccatcgtacagaaggac
caagagattggattcttacgctccatgctcggcaagctcagcgagagggtcgacaggctg
gagaaatccatggaactgaaaattaactacttggacgagaatatgagccgaatggagaag
tcacttgtggagcttgacgagcagaatcgtagcatgtcagatgagctgatggataatagg
agaaactactcgatgctcaactctgagttatccatgatcaacgctcgactcaattcagga
gctgccggagtttatgatccacaacaagttttcaagtgcaaaggaacctttgtcggacat
cagggtccagtgtggtgcttgtgtgtatacggcgactacctcttcagcggttcctcagat
aagaccattaaggtatgggacacgtgtaccagctacacctgccagaagacactggagggt
cacaacggcatcgtgctagcactatgcacacacgggaaccgattattcagtggctcagcg
gactgtactgtaattgtttggaacatagatacactggagcaagagaagattatacaggct
catgagaaccctgtctgcacgttagttgctgcaaataacatgctgttcagtggctcactc
aaggtcattaaggtttgggacgtccattcccacgagctgaaacgtgaactgactggatta
aaccattgggtcagggcgctggttgcaaacggcaactttctctacagtggatcctaccag
acgatcaaggtgtgggacatgagaacattggagatcgtgcacagccttcagacctctgga
ggtagtgtgtattccatcgctgtcacaagccaccacatcattgcaggaacgtatgagaat
tgcatacatgtctgggacaaggcgtcttatgaacaggttgagacgttgactggtcacgtg
ggaacagtctacgccttagcagtcattagtgcccctggtacgactagagtcttcagcgcc
tcctatgataggtcattaagggtgtggaacatggagaatatgatctgtacacagactctc
cttcgacatcagggtagcgtggcttgtctagctgtctccagagggcgcttgttctccggc
gctgttgatagcactgtgaaggtgtggcagtaa
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