Asterias amurensis (Northern Pacific seastar): 139944373
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Entry
139944373 CDS
T10870
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139944373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139944373
Spliceosome [BR:
aamu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139944373
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Peptidase_S66
Cas_Cas7
Motif
Other DBs
NCBI-GeneID:
139944373
NCBI-ProteinID:
XP_071797478
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Position
11:complement(13661611..13675402)
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AA seq
493 aa
AA seq
DB search
MSLADELLADLEEIAEEGEELEAINEEDEDIEDVQDIAMDIDTRVDSIKSIAKLRHSKEL
ANVMTQIEHFQENPRKEEVVGPVEADPEYMLIVEANNLSVEIDNEINIIHKFVRDNYQKR
FPELESLVPTPQEYLRTVRELGNTLDNTKTNEQLQAILTNAVIMVVSVSASTTQGTELSD
EELATVFEACDMAFDLNEAKSRIQAYVESRMSFIAPNLSAIIGSSTAAKIMGAAGGLTNL
SKMPSCNILVLGAQRKTLSGFSSVATNPHTGYIYYSDIVQATNPDLRKKAARLVSGKCTL
AARVDSFHESPNATIGFNLKEDIDNRLAKLQEPPPPKQAKALPAPIDVSRKKRGGRRVRK
MKEKLGMTSMRKAANRMSFGEIEDDAYQEDLGFSLGQVGKGGTGRIRGPTVDNKTQVKIS
KSLQRKLQRQQTHGGKSTVRGRETSGTASSVAFTPLQGLEIVNPHAAEKKNSEENVGYFS
TTTGFKKVMSAAK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgcggatgagcttctggcggacttggaggagattgcagaggagggggaggag
ctagaggccattaatgaggaggatgaagacattgaagatgtacaagatatcgccatggac
attgatactagggtggactcgatcaagtctattgctaagctcagacacagcaaagagttg
gcaaacgtgatgacccagattgaacactttcaagaaaatcctcgcaaagaagaagtggtt
ggtcctgtagaagctgatccagagtatatgctgatcgttgaagctaataacctcagtgtg
gagattgataatgaaatcaatattattcacaaatttgtaagagacaactatcaaaaacgg
ttccctgagctggaatcactggtcccaacaccccaagaatacctcagaacagttcgggaa
cttggcaacacccttgataacaccaagacaaatgaacagctccaagccatcttgaccaat
gctgtgataatggttgtgagtgtatcagcctctactactcaggggactgagctatcggac
gaggaactagccactgtctttgaagcttgtgatatggcatttgatttgaatgaagccaag
tcaagaatccaagcctatgtagaatctcgtatgtccttcattgcaccaaacctgtctgct
ataatcggatcatcaacagcggccaagatcatgggtgctgctggagggttaaccaatcta
tctaagatgccatcctgtaatatcttggtccttggagcacagcgtaagacactatcaggc
ttctctagtgtagccacaaacccacacacaggttacatctactacagtgacattgtacaa
gcaacaaatcctgatttgagaaagaaagcagcccgccttgtttcagggaaatgcacccta
gctgcacgagttgacagcttccatgaaagtcctaatgccaccattggtttcaaccttaaa
gaggatattgacaacaggttagctaagctgcaggagcctcctccacccaaacaggctaag
gcgttacctgcacctatcgacgtcagcaggaaaaaacgtggtggaagaagagtccgcaag
atgaaagagaagctaggaatgacaagtatgcgcaaggcggccaatcgcatgtcatttggt
gagatagaggatgatgcttatcaagaggatctgggcttctctttagggcaagttggcaag
ggtggaaccggaaggatacgaggtccgactgtcgataataaaacacaggtcaagatatcc
aagagtcttcagcgcaagttacagagacaacagacacatggagggaagtcaacggtaaga
ggccgtgagacatctggtacagcatccagtgtggcgttcacacccctacagggtctggaa
attgtgaatccgcatgcagcagagaagaagaactcggaggaaaatgtcggatatttctca
acaacgacaggatttaagaaagtaatgtctgccgcaaagtga
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