Asterias amurensis (Northern Pacific seastar): 139944403
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Entry
139944403 CDS
T10870
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03420
Nucleotide excision repair
Brite
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139944403
DNA repair and recombination proteins [BR:
aamu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
139944403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139944403
NCBI-ProteinID:
XP_071797516
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Position
11:13271638..13288953
Genome browser
AA seq
1489 aa
AA seq
DB search
MATPMSAAKNENGDQTQQSTAAASGLALPENEQETTDVLPPTTTSDIPQTDTSSSGVDPS
TPSASACLKNLAGNIDQNGASTSNKDEASTSTGGVFSINRDLIPSVPNQMQATELQGLEG
VSVFDQEEFEKGVLEQVDQAISARQQVVDRERAEKDLNAVLVDIRSCKKDLGHITKVMSN
MNSKTIPLTFAQKEVQRNLISMRTKRDNKAKQLKTLRARQRSLLAKLSGSDVNLQVSDDE
EEGQDQNVQTYQQLLCRSPTSEGIPTQPAKETEQERLIRLGEMTPFGSMVQSKASTSKKP
LHPQPMTDFEKFMTQKTQDDMTRRKKVTPRKPTPMKSKSEPIKIQSSQPTHKIAPVQQDV
KQKQKELSKKLKQKSTKKPTKETKKKTTDSSDDETYFVYKPVRSETSASFPKSRKRPKKT
RDLKPHWGSDAELSDWDNDGNNSEQSDEDYTPGFNDLSDEDEECFTPKKKSKKRGRKESI
STEDFEDGTIACLDDLKKSYGVKVQRSKSGHRKFKCKDDATQDLYFRRLKENRRSELVKK
QRMIERGEVDSDSEPEDMQFEGGLIIPGKIWCNLYKYQKVGVKWLWELHQQQAGGIIGDE
MGLGKTIQMIAFLAGLRGSKLRNPGSRYIGLGPVLIVCPATVMHQWVKEFHKWYPEMRVA
ILHDSGSHTGSKRALIHDIALCHGTLVTSYSAVRIQEKLLLKHTWHYIVLDEGHKIRNPD
AAVTQACKQFRTCHRLILSGSPMQNNLRELWSLIDFVFPGKLGTLPVFMEKFSVPITIGG
YSNATQVQVQTAYKCASVLRDTINPYLLRRLKADVKQNLNLPSKSEQVLFCRLSEEQIQI
YKDYLNSKECQLILNREYQVFAGLITLRKICNHPDLVSGGPRIIKGDTSLEAVQAANDPA
MQYGYWQRSGKMIVINSLLKLWSKQNHRVLLFSQSKQMLDIIEDFVKKTYTYMRMDGTTP
ISSRQPLIQQYNNDPSIFVFLLTTRVGGLGVNLTGANRVVIFDPDWNPSTDTQARERAWR
IGQTRQVTIYRLITAGAIEEKIYHRQIFKQFLTNRVLKDPRQRRFFKSNDLFELFTLTSD
SNKHGTETSAIFAGVGSDVKVPTTAHRPARKKSIERRDKTELQGRKERNGVRRMEVHDSE
METGEVKSEIQNGISQEDVPGCSRSVENGVDSEVRITSRSNGRKSLDVEMGDQAGTSKGE
KSNAERKRRKKKKDARLDGHRIAHLAKHTAYQPKSEHGEPKDEQTDAQKDDYVLSKLFKK
SGVHSALQHDNIMEAASPDYLLVEGEAERVARDAVKALKDSRRHCHRATSGVPTWTGSGA
SGGTTTPPKKPRFGQKSNNKVAGLLGGSKLLQGKIKKQKPISVPKPTHFSGKELIETAAS
QNSTKTTALPSSGSLLAQIRKRNNVSATDTDNQTSVVLPQHDLLVDIRDFVSFQAETNGQ
ATTNEILHKFRGKLPSNDSALFKSMLTEICVFQRVNGGEGLWKLKEDFR
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggctacaccgatgtcagcagccaagaatgagaatggagatcagacacagcagagtaca
gctgctgcttctggacttgcccttcccgaaaatgaacaagaaactacagatgtgctacca
ccaactacaacctccgatattccacaaactgacacctcctcatcaggcgtagatccatca
acgccgtctgcaagcgcctgtctgaaaaacctagcaggtaacatcgatcaaaatggagca
tcgaccagtaacaaagacgaggcgtcgaccagtacagggggcgtgttctccatcaacagg
gacctcatcccctctgtgccgaaccagatgcaggccactgagctccagggtctagaaggg
gtcagtgtcttcgatcaggaggagtttgagaagggggtcttagagcaggttgatcaggcc
atctcggccaggcagcaagttgtggaccgtgagagggctgagaaggacctgaatgctgtc
ctggttgacataaggtcatgcaagaaggatctaggacatattactaaagtgatgtccaac
atgaacagtaagacgattccattaacatttgctcagaaggaagttcagaggaatctcatc
tccatgcgcacaaagagagacaacaaggcaaaacaactcaagactctccgtgctcgacag
cgatctctacttgccaagttgagcggctctgatgtaaatctacaggtttcagatgatgag
gaagaaggtcaagatcaaaacgttcagacgtaccaacagcttttatgtcgcagcccaacc
tcagagggaatcccaacacaacccgcaaaagagacagaacaagaacgtcttatacgcctc
ggagaaatgacaccctttggctcaatggtacagtccaaagcatcaacgagtaaaaaaccc
ctccacccacaacccatgacagactttgagaagttcatgacacaaaaaacacaagatgac
atgacacgtcgaaagaaagtcacccctcgtaaaccgactcccatgaaatcaaaatccgaa
cccatcaaaatccaaagttcacaacctactcataaaatagcaccagtccaacaggacgtc
aaacagaagcaaaaagaactctcaaaaaaactgaagcagaaatcaacgaaaaagcctacc
aaggaaaccaaaaagaaaacaactgactcatcggatgatgagacatactttgtttacaaa
cctgtgaggagtgagacatcagcgagttttccaaagtctcgcaagaggccgaagaagaca
cgagatctgaaaccccattgggggagtgatgctgagttgagtgactgggacaacgatggg
aataacagtgagcagagtgatgaggattatacaccggggttcaacgacctctcagatgaa
gatgaggagtgtttcacaccaaagaaaaaatccaagaagagaggtcgtaaggaaagcatc
tcaaccgaagactttgaagatggtaccatagcatgtcttgatgaccttaagaagtcatat
ggggtcaaagttcaacgttcaaaaagcggtcacaggaagttcaaatgcaaggatgatgct
acacaggatctgtattttcgtagattgaaagagaaccgtaggtccgagttggtgaagaag
cagcggatgattgagagaggggaggtggatagtgactcagagcctgaggatatgcagttt
gagggcgggctcatcataccaggcaaaatatggtgcaatctatacaagtatcagaaggtt
ggagtgaagtggttgtgggagcttcatcagcagcaggctgggggcatcattggagatgaa
atgggtcttgggaagaccattcagatgattgcattcttagctggactcagagggagcaag
ctacgcaatcctggttccagatacattggtcttgggccggtgctcattgtatgtccagct
acagtcatgcatcaatgggtcaaggagttccataaatggtacccagagatgagggtagct
atcttgcatgactctggatcacacactggatcaaagagggcgcttatccatgacatagcg
ctctgccatggaactttagttacgtcttattcagcggtgcgtattcaagagaagctacta
ctgaagcatacatggcattatatagtcctggatgaaggacataagatccgcaatcctgat
gctgccgtcactcaagcttgtaaacagtttcgtacatgtcatcggctgatcctgtctggt
tccccgatgcagaataatctacgtgagctttggtctctgattgactttgtcttcccaggc
aaactggggacactccctgtcttcatggagaagttctctgttcccattacgataggaggc
tactcaaatgctactcaagtacaggttcagacagcctacaagtgtgcctcggtgctccgt
gacaccatcaacccatacctcttgagacgactcaaggcagacgtcaagcaaaacctgaat
ctccctagtaagagtgagcaggtcctattctgtcgtctctctgaggagcagattcagatc
tacaaggattacctcaactccaaggaatgtcagctgattctgaacagggaatatcaggtt
tttgcaggtctgataacgctgcgtaagatctgcaaccatcctgacctggtgagtgggggt
ccgcgcatcatcaaaggagacaccagcctagaggctgtgcaggcagccaacgatcctgca
atgcagtatgggtactggcaacgctccgggaagatgattgttattaactcgttgctgaag
ctatggagtaagcagaaccacagggtgttgctgttctcacagagtaaacagatgctggac
atcattgaggactttgtgaagaaaacttacacctacatgaggatggatggtactactcca
atctcatccagacagcctttgatacagcagtacaacaatgacccatcaatctttgtcttc
ttgctgaccacccgagtaggcggccttggtgtgaatctgaccggagctaaccgggtggtc
atctttgaccctgattggaacccgagtacggacacccaggcaagggagcgggcgtggcgt
attggacagacacgccaagtcactatctatcggctcattacagctggggcaatagaggag
aagatttaccacaggcaaatcttcaagcagttccttaccaatcgtgtcctaaaggaccct
cgtcagcgtcgcttcttcaaatccaacgacctctttgaactttttaccttgacttcagac
agcaacaaacacggcacggagaccagcgccatctttgctggcgtcggttcagacgtcaag
gtcccgacaactgcccacagaccagcgaggaaaaagtccatcgagaggagagacaagacg
gaacttcagggaaggaaggaaaggaatggagtaaggaggatggaagtccatgattccgaa
atggaaactggagaggtgaaaagcgaaattcaaaatggcatttcgcaggaagatgttcct
ggatgcagcaggtctgtggagaatggtgttgattctgaggtgcgaattacttcaaggagt
aatggaaggaaatccttggatgtagagatgggagatcaggctggaacgagtaaaggggag
aagagcaatgctgagagaaagaggaggaaaaagaaaaaggatgcaagacttgatggacat
cgtattgctcacttagccaagcacactgcatatcaacccaagtcggaacacggagagcca
aaggatgaacagactgatgctcagaaagatgactacgtcctcagcaaactcttcaagaaa
tcaggagtacacagcgccttgcagcatgacaacatcatggaggcagctagccctgattat
ctactcgtagagggagaagcagaacgggttgctagggatgccgtcaaggccctcaaagat
tccagacgtcactgccatcgagccacctcaggggtacctacatggactggatctggagcc
tcaggaggcaccacaaccccgcctaagaaaccaaggtttgggcagaagtcaaacaacaaa
gtagctggtttgctcggtggcagtaagctgttacaaggaaagataaaaaaacagaagccg
atatctgtcccaaagccaacacacttctccggtaaggagttgatagaaactgcagcatca
cagaacagtaccaagaccacggcccttccatcttcaggatccctgctagctcagatacgg
aagcgcaacaatgtctccgccacagatacagacaatcagacctctgtcgtcctcccgcag
catgatcttctcgtggacattcgggactttgtgtccttccaggcagagaccaatggccag
gcgacaacgaatgagatccttcacaagttcaggggaaagcttccatcgaatgattcggcg
ttgtttaagtccatgctgactgagatatgtgtgttccagagagtgaacggtggagaggga
ttgtggaaactcaaggaggactttcgttga
DBGET
integrated database retrieval system
