Asterias amurensis (Northern Pacific seastar): 139944454
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Entry
139944454 CDS
T10870
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139944454
Enzymes [BR:
aamu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139944454
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139944454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
ResIII
AAA_7
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
139944454
NCBI-ProteinID:
XP_071797573
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All DBs
Position
11:complement(17373742..17468069)
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AA seq
1315 aa
AA seq
DB search
MANIEHKEKQRSLDEKVDKKQRTTKHSHSRKDGSSTDSRIKTDKHPYDYERSSTSQSRGR
DRDESDKRSSSSRDRKEKHRTSSLSSSSHKTSPTRDHKHDKRSSKSWTYYGYTANDVPKQ
EQSRSLDILPDIGIHRSSMNQDDSMTSKTQKVRENDIKLSSREKPPDRHPVEEAVVLDGV
FNWERHRRELDAIFFRDDGIIKRKSQDYKDFWKFFERYQTFQFKQSSKRLDKGNAENEAD
KKKSSGKSPVLGLPLRYDKKHRINMKLVIKGIDEAERRSSWLNTSKDDEDDLPKERIREF
CKVLLYYMDFCQKQQFTKLAKLLHDKANLPIARYQDMIVDAVRANQTVIVAGDTGCGKST
QVPQYLMKAGFKGIACTQPRRIACISLAKRVGFETLHEYGMEVGYQIRFEASKSSSTKIL
FLTEGLLLRQLSSDPTLQQYNVIVLDEVHERHLHGDFLLGVLRCLLEQREDLKLVLMSAT
INIGLFSGYFDKAPVIQVPGRLYPITMEYVPIKMEEQSSKSEKLDPRPYLRIMQRIDKKY
PSSERGDLLIFLSGMSEISSVTEAAKLYAETTKRWIVLSLHSTLSITEQDKVFDIAPEGV
RKCIVSTNIAETSVTIDGIRFITDSGKVKEMSYNAEAKMQQLQEFWISRASAEQRKGRAG
RTGPGVCFRLYDESDYDEFQEYSTPEIHRVPLDSLILQMMALGLNDPRKFPFIEPPPASS
VESSIIFLKEQGALTQQEKLTSIGRLLADLPVDVVIGKMLIMATVFKMIEPVLCIAASLS
VQSPFTSRAHRDSEAMTARRPLESDHGDPFTLLNAFDEWIQVKGKGQPSRKWCKKRGLEE
QRFYEMSKLKRQFEALLRDHNLVERLSDPSERRYSSAERYKRNLEKRQLRDLKKKEHSGP
KKRKVLRLGQEDFDASDDEDDDGKDLKSLEFKLTHDLNRLQTTASLNRSFTLRQLNLLKV
ILCSGLYPQLAIAEDCNTYRRECDQVFHTKAKQFVLLHPTGVFANNPSVLEPPEEKDQVG
HSSSRGALSSKHQLLAYVSLLETNKPYLVNTMRVPALQTVMLYANCLDTNPSCTRFVVDE
WIEFTIPDVDTAEHILSAVMQLRASWLQLLEIRLKDSQVSVESAGGRGNLRVVHQERVLS
IKLAEFLDCHVEYTMRKLGSTELHNLYTGPHVQGKGKQETFFTSQSTKGHPHPTKGGTQV
NDYLTYGCLFNVASDSLGEFSSVLRRHWSCPHCNNTLIVTTLEKIQHETECLQASTASQD
EAGLTEKAEGTQSDMSGMGTLRRQYECTVCNQEFSFTSTEILKHKRMHAKKESAD
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacattgagcataaagaaaaacaacgatcattggatgaaaaagttgacaagaag
caaagaactaccaaacactctcacagtcgtaaagacggaagcagtacagactctagaatc
aaaacagataagcatccttatgattatgaaagaagttcaacatcgcaatcaagaggacgg
gatcgggatgagagtgataagaggtcatcttcctcacgcgacagaaaagaaaaacataga
acttcatctttgtcatcttcaagccataaaacatcacccacaagggaccataaacatgat
aaaagaagttcaaagtcttggacttattatggttacactgccaatgatgttcccaaacaa
gaacaatcaagatcattggacattttgccagatattgggattcatcgaagctccatgaat
caggatgattcaatgacgtcaaagacacagaaggttagagaaaacgatatcaaactttca
tctcgggagaagccccctgatcggcacccagtagaggaagctgtcgtacttgatggagtg
ttcaattgggagagacaccggcgagaattagatgcaatatttttcagagatgacggaatc
atcaaaagaaaatctcaggattataaagatttctggaagttctttgagcgttaccaaact
ttccaattcaagcagagttcaaagcgacttgataaaggtaatgctgaaaatgaagctgat
aaaaagaagagctcagggaaatctccagtactaggactgcccctgagatatgataagaaa
catcgcatcaatatgaaattggtcatcaaaggaattgatgaggctgagagaaggtcatca
tggcttaacacttctaaagatgatgaagacgacttaccaaaggagaggataagagaattc
tgcaaggttctgttgtactacatggacttctgccaaaagcaacagtttacaaagttggct
aagttactccatgataaagccaacctccctattgctcgataccaggatatgatcgtagat
gcagtcagagccaaccagacagttattgtggctggagacacagggtgtggaaagtcaacg
caggtgccacagtatctgatgaaagcgggcttcaagggaatagcctgtacccagcctcga
cgcatagcctgtatctccctggctaagcgagttgggtttgaaacactacatgagtatggc
atggaggtggggtaccagattcgatttgaggccagtaagagttcatcaaccaaaatcctc
tttctcactgaagggctactgttgagacaactgagctctgatcctaccctacagcagtat
aacgtcatcgttctggatgaggtgcatgagcgtcatctccatggcgatttcctcttggga
gtcttacgttgcctcctggagcaaagagaagacttgaagctcgtcctcatgtcagctaca
atcaatatcggtctcttctctggctactttgataaggcaccagtcattcaggttccaggc
cggttgtatccaattacaatggagtatgttcctatcaaaatggaggagcagagctccaag
tctgagaagcttgaccctcgaccttatctacgcatcatgcagcggattgataagaagtat
ccgtcctcggagagaggagatctactcatcttcctgagcggcatgtcagaaatatccagc
gtgacggaagctgctaagctctatgctgaaacgacaaagcgatggattgttttatctcta
cacagtacactgtccatcactgaacaagataaagtgtttgacatcgcccctgaaggcgtc
aggaagtgcattgtgtcaactaatatcgctgagacgtccgttactatcgatggcatacgc
ttcattactgactcaggaaaagtgaaggagatgagttacaatgcagaagccaagatgcaa
caactgcaggagttttggattagcagagcaagcgctgagcaacgtaaaggaagagcaggg
cgtaccgggccaggtgtatgtttccgtctttacgatgagtcagattacgatgagttccag
gagtactcaacgcctgagattcaccgagttccactggactcactcatcctacagatgatg
gcactgggactcaatgatcctagaaaattcccgttcattgagccgcctcctgcctctagt
gtagagagctccatcatcttcttgaaggagcaaggagctctgactcaacaggagaagctg
acatccattgggagactccttgctgacctacctgtagatgtagtcattggaaagatgctc
atcatggctacagtcttcaagatgatagagccagtgttatgcattgcagcatctctcagt
gtccaatcaccattcacaagtagagcacacagggactcggaagctatgactgcacggcgc
cctctggagtctgaccatggagatcctttcacattattgaatgcatttgatgaatggatt
caagtaaagggcaaaggtcaaccttctcgaaaatggtgcaagaaacgaggattggaagag
caacgattctatgagatgtcaaaactcaagagacagtttgaagcacttctcagggatcat
aaccttgtggagagattgagcgatccatctgagaggcgctatagcagcgcagagaggtat
aaacggaatctagaaaaaagacagctcagagatctgaagaaaaaagaacacagtgggccc
aagaaacgcaaagttctccgattaggacaggaggactttgatgcgagcgatgatgaagat
gatgatggcaaggacctcaagagtctagagttcaaattaacccatgacctcaaccgcctt
cagaccacagctagcctgaaccgtagcttcactctacgtcagctgaaccttctgaaggtg
attctgtgtagcggactctacccacagctagccatcgctgaggattgcaacacctaccgc
cgagaatgtgaccaagtattccacaccaaggccaagcaatttgttcttcttcatccaact
ggagtatttgccaacaacccatccgtccttgaaccaccagaggagaaggaccaagtaggc
cattctagttccagaggggccttgagcagtaaacatcaactccttgcatatgtatctcta
ctggaaactaacaaaccatatttagtaaacacaatgagggtaccagctttacagactgtc
atgttgtatgcaaactgcttggataccaacccgtcatgtacaaggtttgttgtcgatgag
tggattgagtttaccattcctgatgtagatacagccgagcacatcctatctgctgtcatg
cagctacgagcttcatggcttcaactccttgaaataagactaaaagacagtcaggtgtcc
gttgagtctgcgggtgggcgtggcaatctgcgtgttgtacaccaggagagagttctatct
attaaactagctgagtttctagattgccacgttgagtacacaatgaggaaacttggctca
actgaactgcacaacctctacactggccctcatgtccaagggaaaggaaagcaagaaaca
ttcttcacatcacagagtacaaaaggtcaccctcaccctactaagggagggacgcaggtt
aatgattacctaacctatggatgtttgttcaacgttgccagtgattctttaggtgaattc
agctcggttctacgtcggcattggtcgtgtcctcattgcaacaacacactgattgtgact
acactagagaagattcaacatgagacagagtgtctacaggcatcaacagcgtctcaagat
gaagcaggacttacggagaaggctgagggtacccagagcgacatgagtggaatgggaaca
ctgaggaggcaatatgaatgcaccgtctgcaaccaagagttctccttcacatccacagag
attcttaaacacaagagaatgcatgccaagaaagagtcagcagactga
DBGET
integrated database retrieval system
