Asterias amurensis (Northern Pacific seastar): 139944549
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Entry
139944549 CDS
T10870
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139944549
Enzymes [BR:
aamu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139944549
Spliceosome [BR:
aamu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139944549
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DNA_circ_N
Motif
Other DBs
NCBI-GeneID:
139944549
NCBI-ProteinID:
XP_071797697
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All DBs
Position
11:21880439..21910546
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AA seq
800 aa
AA seq
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MSRYERERNFDASGRSDRRGGGGFRGGNSFGGGGGPPRFGGRGGGRGGSFGNMGGLREKF
GQPGERLRKIRWDPARLTPFEKNFYKEHPDVTNRPQSEIDRFMQEKDITTKGDSCSRPVF
RFTEACFPDYVLNELAKCGFNEPTAIQAQGWPLAMSGRDMVGIAQTGSGKTLSYILPAIV
HINHQPFLEPNEGPICLVLAPTRELAQQVQSVAYQFGKTSRLKSTCVYGGAPKAPQLRDL
ERGSEIVIATPGRLIDFLEGKKTNLARCTYVVLDEADRMLDMGFEPQIRKIMEQIRPDRQ
VLMWSATWPKDVCALAEEFLRDYHTVNIGSLSLSANHNILQIIDVCDDFQKDEKLIKLLE
QIMGEKENKTLIFAETKRRTDELTRKMRKDGWPAMCIHGDKSQPERDWVLNEFRSGKAPI
LVATDVASRGLDVNDIKFVINYDYPNSSEDYVHRIGRTARSSNTGTAYTFFTANNAKQAN
ELIQVLQEANQKVHPKLIQLAQSARAFGRGRQRYRQSGNSYGNGNRGSSNGYAGNNRGRS
TNFNGSGSEKYGNTDFSQTQSRQGDSRFGQQRDGEFGGGFRGRNFGQPGNEERNRPFGKV
DQHNSGPKKEFASSHLLPESQGLNSGNQGASSRGPLPQRQGPPQQIMSSQQQLNMVPGHE
LGRKPQQLGHFQQPNSSGSHQGTGNPHVNPKRGQLLGSQQATVNPNSEGHFAQQQQGEKQ
PKQKPKVDTSTLQQQAAAFAAQQQAQQGSTDPQQLQAAPTASALDPSAYASAQQQYMQYY
QAMAYWQQYQQGAPPTPNAQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtctagatatgaaagagagagaaacttcgatgcttccggacggtccgacaggagagga
ggtggagggtttcgtggtggaaatagttttggtggaggaggtggccctcctcgatttggt
gggcgtggagggggaagaggtggcagtttcggaaatatgggaggactaagagagaagttt
ggtcagcctggagaaagactacggaagatacgttgggatcctgcaaggctcactccattt
gagaagaacttttataaagaacatcctgatgttacaaacaggccacagtctgaaatagac
cgtttcatgcaagaaaaggacataacaacaaaaggtgacagctgctcaagacctgtgttc
cgattcactgaagcatgctttccagactatgtattgaatgaactggcaaaatgtggcttc
aatgaacctactgcaattcaggctcaaggatggcctttagcaatgagtggtagagacatg
gttggcattgctcagactggttctggtaaaactcttagctatatactaccagctattgtg
cacatcaaccaccagccattcctggagcccaatgaggggcccatttgtctggtgcttgcg
ccaaccagagaacttgctcagcaggtgcagagtgttgcttatcaatttggtaaaacatca
agactgaagagtacttgtgtttatggaggagcacccaaggcaccccagctaagagatcta
gaaagaggaagcgaaatagttattgccacacctggacgtctgattgatttcttggaagga
aagaagacaaatttggcaagatgtacctatgttgtattagatgaggctgatcgtatgctg
gatatgggatttgagccacaaatcaggaagattatggaacaaataaggcctgataggcaa
gtgttgatgtggagtgctacatggccgaaggatgtttgtgcgcttgctgaggaattcttg
cgtgattatcatacagttaatattggatctctttcattgtctgctaaccacaacatcttg
cagataatagatgtctgtgatgactttcaaaaagacgaaaagttgatcaaactgctcgaa
caaataatgggagaaaaagaaaacaaaactcttatctttgctgaaacaaaacgacggaca
gatgagcttacaaggaaaatgcgcaaagatggatggccagcaatgtgcatccatggtgat
aagtctcaaccagagcgtgattgggtgctcaatgagttccgatcaggcaaggcacctata
ctggttgctactgatgttgcgtcaagaggattagatgttaatgacatcaagtttgtcatt
aattatgactacccaaattcttctgaggactatgtacatcgtattggacgaacagcacga
agttcaaatacgggtactgcttacacttttttcactgccaacaatgccaagcaggccaat
gagttgattcaggtgcttcaagaagctaaccagaaggttcatccgaaattgatccaactt
gctcagagtgctcgggcgtttggtagaggccgccaacgttatcgtcagtcaggcaacagc
tatggaaatggcaaccgaggctcttcaaatggatatgctggcaacaacagaggacgaagc
accaatttcaatggatctggaagtgaaaagtatggcaacactgacttctctcagactcag
tctaggcaaggggatagtagatttggacaacaacgggatggggaatttggtgggggtttc
agaggtcgtaattttggtcagccggggaatgaagaaagaaatagaccctttggcaaagtt
gatcagcataattctggacctaaaaaggaatttgccagttcccacttgctgccagaaagc
caaggcttaaacagtggcaatcaaggtgcctcaagccggggaccattacctcaaaggcaa
ggtccacctcaacaaataatgagttctcagcagcaactaaatatggttccaggccatgaa
ttgggaaggaaaccccagcaattggggcattttcagcagcctaattcaagtggttcccac
caaggtacaggtaaccctcatgttaaccccaaacggggtcaactccttggttcacagcaa
gcgactgtaaacccaaatagtgaaggtcactttgcacagcaacagcaaggggagaaacag
cctaaacaaaaacccaaagttgatacaagtactctgcagcaacaagcagcagcttttgca
gctcagcagcaagcgcagcaaggttctactgaccctcaacaattgcaagcagctccaaca
gcttctgctttagacccatctgcttatgcttctgcacagcagcagtatatgcaatattac
caggctatggcttattggcagcagtatcaacaaggtgctcctcccaccccaaacgctcag
tga
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