Asterias amurensis (Northern Pacific seastar): 139944674
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Entry
139944674 CDS
T10870
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03440
Homologous recombination
aamu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139944674
03460 Fanconi anemia pathway
139944674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamu03032
]
139944674
03400 DNA repair and recombination proteins [BR:
aamu03400
]
139944674
Enzymes [BR:
aamu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139944674
DNA replication proteins [BR:
aamu03032
]
Eukaryotic type
DNA Topoisomerases
139944674
DNA repair and recombination proteins [BR:
aamu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139944674
FA (Fanconi anemia) pathway
139944674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
Lar_restr_allev
zf-C2H2_10
Toprim_4
Motif
Other DBs
NCBI-GeneID:
139944674
NCBI-ProteinID:
XP_071797847
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All DBs
Position
11:complement(21406280..21438619)
Genome browser
AA seq
1132 aa
AA seq
DB search
MFVSSLRSLFWNVGPEKLTLAKIGCSLSSAGSCFGGGILKLGTWNHKMARGLRVLNVAEK
NDAAKSLADLMSRGQFRRSEGFSKFNKIYEYEYNLFDQNCKMTMTSVSGHLLNYEFVSAF
KKWHSCNPVALFSAEVFKGCPENYKDIKRTLEREARKHDVLVIWTDGDREGENIGFEIIQ
VCTAVKPQLDVYRARFSEITPQSIANTCRNLVRPDERITNAVDVRQQLDLRIGAAFTRFQ
TLRLCKVFPNILDGQLISFGSCQFPTLGFVVERYKQVEAFIPEAFYKIKVLHELDDTKVE
FNWKRHRLFHRLACEVLLQVCLDDPMATVTNVSSRSKSKWRPLPMDTVELEKLSSRKLRI
SAKETMKIAEKLYTKGFISYPRTETNTFPKELNLRDLVQEQTQDPRWGPFAAGILQEGPT
PRQGNKTDNAHPPIHPLKYTDTLQGNDQKVFELIVRHFLACCSKDAQGFETTVEIKIANE
EFSAQGLMIVARNYLDVYPYDKWNAKVIPVFQEGQTFQPNSIQMVDGETSPPPLLTEADL
IALMDKHGIGTDATHADHIDTIKSRLYVGVRPDGRFVPGELGMGLVEGYDNMGYALSKPH
LRAELESDLKRICEGLKDPDVVLREQIEKYKQVFIEAAANANMLDVALSGYLGQQPEAYV
PDVTEIESMTPVRSCPRCNQSMILKAKKDGGWMVSCTGYPACKAAVWFPAAVQEASVSDD
VCQTCLPGPVKKIKLKLKRGSIPPMMPTQYVGCIGGCDVTLMESLDLNLSYLRAPPQTQV
PTTNARNDRGRGQTRGRGGRGGRGNGGGGNGGGWGGGGGGGGGGGGGGNGRGGGGGGWGG
DNGGGVGGSRSGGRGDNDWGGRGGGGGSSGRGGSHQSGNRAFSSQTAQSRQPLDQVPIGG
TSFFAGTNSSSDNAIVCNCGGDALRLTVKKPGPNNGRQFYKCNSGECNFFLWADENSNST
SNSTNNSNDSGWSSSKSSGSTSGSSWTGATSSYGSNTTGSYRSSSGFESGNDSTDVKTNV
WGEVMCQCGQAAVLRTVQKEGPNKGREFNVCNKPQGKQCNFFEWKDGAGNSRKGNSSSNQ
PSWGDKQSGFSKKGRGGSSGFSKGSDDNRKRKKPTCSICNQEGHTKRSCPMK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtctcaagtctgagaagtttgttttggaatgttggtcctgaaaagttaacacta
gcaaagatcggttgcagtctctcgtcagctggcagctgttttggtggtggtattttaaag
ttgggaacttggaatcacaaaatggcgagaggtttgagagtgctcaatgttgctgagaaa
aatgacgcagccaagtcacttgctgatctgatgtctagggggcaatttagaaggagtgaa
ggattctccaagttcaacaagatttatgagtatgagtacaatctctttgaccaaaactgc
aaaatgacgatgacatcagtgtccggccacttgctcaactatgaattcgtctcggccttc
aaaaaatggcacagttgtaatccagtagctttatttagtgctgaggtcttcaaagggtgc
cctgaaaactataaagacatcaagaggacattagagcgagaggccaggaaacatgatgtt
cttgttatttggacggatggagacagggaaggtgaaaatattggctttgaaatcattcaa
gtctgtacagcagtgaaacctcagttggatgtctacagagcgagattttcagagataact
ccacaatctattgccaatacatgtcgtaatctagttcggcctgatgagagaataactaat
gcagtagatgtcagacaacagcttgatctgagaataggtgctgccttcactcgtttccaa
accctacgattgtgcaaggtgtttcctaacatcctggacgggcagttaatcagctttggt
agttgtcagttccctacactagggtttgtggttgaacgatataaacaagtagaagcgttc
ataccagaagcattctataaaatcaaagttttgcatgaactggatgacactaaagtggag
tttaactggaagagacatagattatttcatcgcttagcatgtgaggtattactccaagtg
tgtcttgatgaccccatggcaacagtaactaatgtcagcagtagaagtaagagtaaatgg
agaccactacccatggatacagtggaattggaaaagttatcatctcgcaagcttcggatc
agtgctaaggagacaatgaagattgctgagaaactctacaccaaaggattcatcagttat
ccacgcactgaaaccaacacatttccaaaggagttgaatttacgtgatctggttcaagaa
cagacacaggatccaagatggggaccgtttgcggcaggcatcttacaagaaggtccgaca
cctcgccaaggcaacaagacagataatgctcatccccctatccatcctctcaagtatacc
gatacactgcaaggaaatgaccagaaggtctttgagctcattgtcagacacttccttgct
tgctgttcaaaggatgctcaaggttttgagaccactgtggagatcaagattgcaaatgaa
gaattctcagcacaaggtttgatgatcgttgcaaggaactatttagatgtctacccgtat
gataaatggaatgctaaggtcattccggttttccaggaaggtcaaacattccaacctaat
tcaatccagatggttgatggcgagacaagtccaccccccttactaactgaagctgatctg
attgcactcatggataaacatggaatcggtactgatgccactcatgctgatcacattgat
accattaaatctcgtctgtatgttggagttagacccgatggtaggtttgttcctggtgag
ctaggtatgggactagtagaaggatatgacaacatgggatatgcactctccaaaccacac
ctaagagcggaactggaatcagatcttaaaagaatatgtgaaggactgaaggacccagac
gttgtgttaagggaacaaattgagaaatacaaacaagtcttcattgaagctgctgcaaat
gccaacatgttggatgtagcgctatctggatatcttggtcaacaaccagaagcatatgta
ccagatgtgactgagatagaatccatgactccagtccgctcctgcccacgttgcaaccaa
tcaatgatccttaaagccaagaaagatggcggctggatggtctcatgcactggctaccca
gcatgcaaagctgcagtctggttccctgcggctgtacaagaagcatctgtatctgatgat
gtttgccagacttgcctacctggaccagtgaagaagatcaagttgaaattgaagagagga
tccatacctccaatgatgccaacacaatatgttggttgtatcggaggttgtgatgtgaca
ctgatggaatccttagatctgaatcttagttatcttagggctcctcctcaaacacaagta
ccaacaacaaatgcaagaaatgatcgaggaagaggccagacaagaggacggggtggcaga
ggtggtagaggcaatggagggggaggcaacggaggaggatggggaggaggaggaggtgga
ggtggtggaggaggaggaggaggcaatggaaggggaggaggaggaggaggatggggtggg
gacaatggtggaggagttggtggaagtagaagcgggggtagaggagacaacgactggggt
ggtaggggaggaggtggcggtagtagtggacgtggaggaagtcatcaaagtggaaacaga
gctttttcctctcagacggcacagtctagacaacctcttgatcaagtacctattggagga
acatcattctttgctggtactaatagcagtagtgacaatgccattgtgtgtaactgtgga
ggtgatgcattacggcttacagtgaagaaaccgggaccaaacaatgggcgccagttctac
aagtgtaactcgggggaatgtaacttcttcctatgggctgatgagaactcaaactcaact
tccaattctacaaacaattccaatgattctggttggagttctagtaagagttctggttct
accagtggaagctcttggactggtgctacaagcagctatggcagtaatactacaggcagc
tataggagtagtagtgggtttgagtctgggaatgattctacagatgtcaagactaatgta
tggggagaggtcatgtgtcaatgcggacaggcggcagtcttacggacagtacaaaaagaa
ggaccaaataaaggcagagagttcaacgtgtgcaacaaaccacagggaaagcaatgtaac
ttctttgaatggaaagatggtgcggggaacagtagaaaaggaaacagctccagtaaccaa
ccatcatggggtgataagcaaagtgggtttagcaagaaaggaagaggtggtagttcaggc
tttagcaaaggcagtgatgataaccggaagagaaagaaaccaacatgtagtatctgcaat
caagagggtcacacaaagcgtagttgcccaatgaaatga
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integrated database retrieval system
