Asterias amurensis (Northern Pacific seastar): 139944912
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Entry
139944912 CDS
T10870
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamu04121
]
139944912
Enzymes [BR:
aamu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139944912
Ubiquitin system [BR:
aamu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139944912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
Prok-RING_4
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
139944912
NCBI-ProteinID:
XP_071798186
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All DBs
Position
12:5033733..5055123
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AA seq
418 aa
AA seq
DB search
MGTGAHLKTVLCWLASLAVMAVSMPSYAFADVVAITLKNETFIFPSVPSTFGGRLPLNGL
EGVLVVASPIDACQPIQHPPKPKNASDYVNYVYFALIRRGICNFNEKVLNAQNMMYQGVI
VFNVGSDELLDMGGDKDAKEVRIPSVFVGASSGAALKRMNYTSGSKIILNSEFTFPYNVY
IIPFISIVGVCFIIMMFFLAAKYVRERQQIKRARLSRTNLKKIPTKKFVKGDAYDVCAIC
LDDYEEGDKLRILPCNHAFHCKCVDPWLTNNRRTCPVCKRKVVPAGEADSDESDSDESSG
GPTEHTPLLSPSSNHAGPGTADTSAASSPGMDGAWGGVEHRNVNQKDASTAMTENDSDSD
IIINDDNKNLLSRSPINEQTIPTLHNVAGLVEDDVPAVVVIDDEQLVQVDMESKENLA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggtactggggcgcatctaaagaccgtcctctgttggctggcaagtctcgcagtgatg
gcagtctcgatgccaagttacgcctttgcagacgtggttgcgatcactttgaagaatgag
accttcatattcccatccgtaccatctaccttcggaggaagacttccattaaacggctta
gagggagtgctcgttgtagcttctccaattgacgcttgccaaccgattcagcatcctccg
aaacccaagaacgcgtccgactacgtcaactacgtgtactttgccctgattaggaggggc
atctgcaacttcaatgagaaggtattgaacgcccagaacatgatgtaccagggtgtcatt
gtgtttaatgtcggctctgatgagctgctggatatgggtggtgacaaagatgccaaagag
gttaggataccctcagtatttgtgggcgcctcgtcaggggcggccctaaaacgaatgaat
tacacctccgggagcaaaattattttgaattctgaattcaccttcccctataatgtatac
atcatcccattcataagtattgtaggcgtttgcttcatcattatgatgttcttcttggct
gccaagtatgtccgtgaacgacaacaaatcaaacgggccagactatcccgtacaaatcta
aaaaagatacccaccaagaaatttgtgaaaggtgatgcgtatgatgtctgtgcaatctgc
ctggatgattatgaagagggcgacaaactgcgcatcctcccctgcaatcacgcatttcac
tgcaagtgcgttgacccttggctgaccaataatcgccgcacctgtccagtctgcaaacgc
aaagtggtaccggccggagaagcagactctgacgagagcgattccgacgaaagctctggg
ggtcccacagagcacacccctctgctctccccctctagcaatcacgccgggccgggcacc
gcagacacctcggccgcctcgtccccaggtatggacggagcatggggcggagtcgaacac
aggaatgtcaatcaaaaggacgcatccaccgccatgaccgagaacgactcagattcagat
atcatcatcaacgacgacaacaagaacttgctgtcgcggtcgccgatcaacgagcagacc
attcccaccttacacaacgtcgcgggattagttgaagatgacgtccctgctgttgtagtc
atcgacgatgagcaacttgtccaggttgacatggagtccaaggaaaatctagcttga
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