Asterias amurensis (Northern Pacific seastar): 139944959
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Entry
139944959 CDS
T10870
Name
(RefSeq) uncharacterized protein
KO
K06237
collagen type IV alpha
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04382
Cornified envelope formation
aamu04512
ECM-receptor interaction
aamu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139944959
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139944959
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139944959
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamu04147
]
139944959
00536 Glycosaminoglycan binding proteins [BR:
aamu00536
]
139944959
Exosome [BR:
aamu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
139944959
Glycosaminoglycan binding proteins [BR:
aamu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139944959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
139944959
NCBI-ProteinID:
XP_071798256
LinkDB
All DBs
Position
12:complement(3201621..3269275)
Genome browser
AA seq
1768 aa
AA seq
DB search
MKFETFSSFGCRFSPHRTTPGGFSLAMWRWGVITVLLSLAVGTSLAQKSGRECVETCKTC
GCKGRAGRRGVPGPIGLEGQRGPSGIQGSGGVPGPRGDKGDDGALGPRGQKGDQGMTGVP
GYPGLDGYTGQPGPRGQYGDPGVAGCNGTKGEPGRPGIGGYGGRGKPGFNGPKGSKGEPA
PYSPASKGPPGDGGYPGEDGRPGQQGPDGRPGETGDRGPKGYQGPNGLQGYPGANGADSP
GSKGLKGKRGPPGRKGQSDKIPGTGEKLSNLTKGDKGDKGYKGSTGEAGMRGERGYAGTK
GGKGPLGMKGETGVRGIAGPRGPTGFDGLSGAPGFPGDRGFQGSNGYDGLPGYQGINGDI
GMDGPIGRKGEPGIPGEIGDGPVGEPGPDGNPGLPGYPGIRGTVGDTGPEGPEGRLGDVG
AQGEPGRPGQSRDGQQGDRGVSGLPGAPGERGDEGNVGPKGRPGDKGAPGISIAGPFGMD
GSPGRPGPIGGKGAVGAQGKPGLPGTTASGEEIVGPIGRPGPEGRRGVKGGQGVQGVSGT
KGFPGLPSAPCPLCPQGQKGATGVPGFPGFPGSYGENGPRGAEGGSGEKGDKGYPGRFGQ
PGFPGIQGPSGFPGDKGDRGELGTIIEVPGFRGSRGDKGDKGSTGEPGTQGRRQVLDQSQ
LSNKTQKGQRGDTGFPGRRGTPGAPGPAGEDGPDGRRIDGPRGPKGVMGEPGRFGIPGFT
GQKGEPAEAVDTEDPVPGPQGEPGPKGFKGRPGSKGSPGQTGSPGLYGDTGFKGMKGGVG
NPGIPSFPGPKGFPGPRGDKGTVGLSGAIGRPGGEGAPGAPGLPGRPGMFGALGEDGQSG
STGPAGFPGDEGPQGPKGDFGNRGLPGQDGYRGFPGLKGDRGDAGGDGLPGEKGLKGALG
FGFPGRPGPQGRKGARGLPGFEGLQGIPGERGQFGSEGSTGDKGVDGLSGIPGPQGQPGE
PGFPGRAGRPGTFGLRGAFGDIGFDGFNGPKGQKGNPGFPSFPGPRGSQGPRGQPGEDGP
LGQPGEPGEVGSVGFPGRFGEPGDVGNFGDPGEDGEDGLLGPLGLDGRPGEPGFPGQVGD
QGFNGNPGMIGEPGMPGMNGLPGALGGPGRPGMKGTRGPSGFRGTSGLPGDQGLIGRPGP
QGPIGPKGIDGIQGQRGRNGFDGNRGFPGEQGPAGEQGLKGDPPNANNLTVPRPPGPKGE
KGPKGEPGRIGNPGLPGLTGDRGPVGEQGLGGYDGYRGFTGAPGARGDQGLPGLFGIEGP
KGMPGMDGIPGGEGRQGLPGPDGPSGAPGFPGFSGFPGREGTPGRPGPRGLPGIKGFPGI
PGENGIPAFVAPQGEPGMDGESGPDGLPGPNGNRGRPGFPGLNGLKGDRGDVGPVGLRRP
PVVGPKGVDGEPGRAGRPGPKGRVGDIGLVGEIGESGSVGLKGYNGFGGRDGRPGLMGMR
GSKGLPGDESNAQKGVKGDIGDVGSYGVPGRPGRPGLPGQDGFNGLPGLKGDIGDQGVPG
QVGLNGRPGPGGPRGDFGDSGSQGESGDKGVGGGVGLPGAPPRPQGFIVVKHSQSRNVPQ
CSAGMTTLWSGYSLLYTEGNERAQHQDLGLAGSCLPRFSTMPYIFCNFNEVCNYAQRNDK
SFWLATSEAIPMMPVSGNGIRPFISRCTVCETPSQIIAVHSQDTTLPDCPQNWRSLWIGF
SFAMYTSAGADGGGSPLASPGSCLESFRATPFIECNGRGNCSFYRNTYSFWMTTVDAQEM
FQRQRPQTLKAGSLRTRVSRCQVCQKQM
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaaacattttcctcgtttggctgccgttttagccctcacagaactacccct
ggaggtttttctctcgctatgtggaggtggggtgtgataactgttctactatcgcttgct
gtaggaacaagtttagcccaaaagagcggaagagaatgtgtagaaacatgtaaaacttgc
ggatgcaaaggaagagcagggagaaggggagtaccaggtcccattggccttgagggacaa
aggggaccttcaggaatacaaggcagtggaggtgtaccgggacccagaggtgacaagggt
gatgatggtgcattggggcccagaggtcagaaaggtgatcagggaatgaccggtgttcct
ggttacccaggtctggacggctacaccggacaaccagggccaagaggacagtacggagac
ccaggggttgctggatgtaatggcacaaagggtgagcctggtcgaccaggaattggtggc
tacggaggtcgaggtaaaccgggttttaacgggcctaagggcagcaagggagagcctgct
ccttactctccagcttccaaaggaccaccaggtgacggaggctatccaggtgaagacgga
aggcctggacaacaaggacctgatggtcgtcctggagaaactggtgatagaggcccaaaa
ggatatcagggtccgaatggcctgcagggatatcccggtgctaatggtgcagactcccct
ggctctaaaggcctaaaaggaaagaggggtccacccggaagaaagggtcagtctgataaa
attccgggtacaggcgagaaactcagtaacttaacaaaaggagacaaaggtgacaagggg
tataagggttccactggtgaagccggtatgaggggtgagaggggatatgcgggcacaaag
ggtggcaagggccctcttgggatgaaaggagagactggtgtacgaggtatcgcgggacca
aggggaccaaccgggtttgacggcttatccggtgctccaggatttccaggagaccgtggg
ttccaaggaagcaacggttacgatggtctgccaggttatcagggaataaatggtgacatt
ggtatggatggtcccattggacgaaaaggagaaccaggaatcccaggggaaattggcgat
ggacccgttggtgaacctggacctgatggtaacccaggtctgccgggataccctggtatt
agaggtaccgttggagacactggacccgaaggccctgagggaagactcggtgatgtgggc
gctcaaggagagcctggaagacctgggcagagtagagacggtcaacaaggagatagagga
gtgtcaggtttgcccggtgcacccggagaacgaggggatgagggcaacgttggacccaag
gggcgacctggcgacaagggagcacccggaatctcaatagctggaccctttggtatggat
ggatcccctggaaggcctggacctattggtggaaagggtgctgttggtgcccaaggaaaa
ccaggtcttccaggtaccactgcatccggtgaggagattgttggacccatcggcagacca
ggacctgaaggacgtcgcggtgtcaagggaggccaaggagtgcaaggagtgtctggaacc
aaaggtttcccaggtcttccttctgccccatgcccgttgtgcccccagggccagaaggga
gcaactggtgtgcctggcttcccaggctttccagggtcatacggtgagaatggacctcgt
ggtgccgagggcgggtcaggcgagaagggagacaaaggctaccctggacgatttgggcaa
cctggattcccgggaatacaaggacctagtggttttcctggagacaaaggtgacagagga
gaacttggaaccatcatcgaagttccaggtttccgtggtagccgcggagacaaaggagac
aagggatccaccggagagccaggtacccagggacgaagacaagttctggatcaaagtcaa
ctctccaacaaaacacaaaagggtcaacgtggagacacagggtttcctggtcgaaggggt
acccctggtgccccaggtcctgctggtgaagatggtcccgatggtcggcgtattgatgga
ccacggggtcctaagggtgtgatgggagagcccggacgatttggcatcccaggttttact
ggacagaaaggagaaccagctgaggcggtggacactgaggatcccgtccctggcccacag
ggtgagcccggacccaaagggttcaagggtcgaccaggatctaagggatcaccgggacag
actggcagtcctggcttgtatggtgatactggcttcaagggcatgaaaggaggtgtcggt
aaccctggaattccgtcctttcctggacctaaaggtttccccggaccccgcggtgacaag
ggaacagtgggtctgtctggtgcaataggtcgccccggtggggaaggcgcaccaggtgct
ccagggcttcctgggcgacccggtatgtttggcgccctcggtgaggacggtcagtctggc
tcaactggaccggctggcttccctggagatgaaggaccgcaaggaccaaagggagatttc
ggcaacagaggattgccaggccaggacggttaccgtggtttcccaggactgaagggagac
aggggagatgcaggaggagatggactgcctggagaaaagggcctgaagggagctttaggg
ttcgggttccctggtagacctggtccacagggaaggaagggggcacgtggactcccaggt
tttgaaggtttgcaaggtatcccaggggagaggggacaattcggcagcgagggaagcacc
ggtgacaagggcgtagatggcttaagtggcataccaggccctcagggccaacccggcgaa
ccagggttccctggccgtgctggaagacccggtacatttggcctccgcggtgcatttggt
gatatcggctttgatggattcaacggtccaaaaggacagaaaggtaacccaggcttccca
agtttccctgggccgcgcggaagccaaggccccaggggccaacctggagaagatggacca
ctaggccagccaggtgagcctggtgaggtcggaagtgtaggattcccaggtcggtttggt
gagccaggagacgtcggtaactttggcgatccaggggaggatggtgaagatgggctcctt
ggtcctctcggcctcgatggtagaccaggggagccaggattccccggccaggttggagat
cagggattcaacggtaacccgggtatgattggtgagcctggcatgcctggaatgaatgga
ctaccgggcgccctcggtggacctggccgtcctggaatgaaaggaacccgtggaccgagt
ggattcagaggaacatccggacttccgggtgatcaaggattaattggaagaccaggccca
caaggtcctattggcccgaagggtatcgacggtatccagggtcaacgaggacgtaatggc
tttgatggaaatcgtggctttccgggagagcagggtccagccggtgagcaaggactgaaa
ggagatccccccaacgctaataatttgaccgtacctcgacctccaggaccgaagggtgaa
aagggacccaaaggagaacccggacgcattggaaatcctggacttcctggactgactgga
gaccgtggacctgtcggagagcaaggtcttggaggatacgacggctaccgtggattcact
ggtgctccaggtgcaagaggagaccagggtcttcctgggttgtttggcatcgaaggaccc
aagggaatgcctggtatggatggtatccctggaggtgaaggaagacagggactaccagga
cccgatggtccatcgggagcaccaggtttcccgggtttctctggcttcccgggcagagag
ggtactcctggtcgcccaggacccagaggtctcccaggcatcaaaggtttcccaggtatt
ccgggtgaaaacggaatccctgccttcgtcgctcctcaaggagagcctgggatggatggg
gaatctggcccagatggattgccaggtccgaatggcaaccggggccgccctggattccct
ggcctgaacggactgaagggagatagaggagatgttggacctgttggtctaaggcgacct
cctgttgttggacccaagggagtcgatggtgaaccgggtcgggcgggacgcccaggacct
aaggggcgagtaggtgatattggtttagttggggagattggtgaatctggatccgttggg
ctcaaaggatacaatggcttcggtggaagagatggtcgaccaggtctgatgggcatgaga
ggttctaagggtctacctggggatgaatccaacgcccagaagggtgtaaagggcgacatc
ggggacgtcggtagctatggtgtccctggacgtccaggccgccccggcctacctggacag
gatggattcaatggtctccctggattgaagggtgatattggagatcaaggtgtgcctgga
caagtaggtctaaacggccgcccaggacccgggggaccgcgaggagactttggagattct
ggatcacaaggggagagtggagacaagggcgtgggtggcggtgttggcttaccaggagct
cctcccagaccccagggcttcatcgtcgttaaacacagtcagtctagaaatgttcctcaa
tgttcagccggcatgacgacactatggagtggatacagtctactgtacactgaaggcaat
gagagagcccaacaccaagatctaggtcttgctgggtcttgcctgccccgattcagcacc
atgccctacatcttctgcaacttcaacgaggtatgcaactacgcccagcgtaacgacaag
tcattctggctggccacgtccgaggctatcccgatgatgccggtctcgggtaacgggatc
agacccttcatcagtcgctgcacggtgtgcgagacgccgtcacagatcatcgctgtgcat
agtcaggataccacgctaccagactgcccgcagaactggagatcactgtggattggattc
agctttgcaatgtacacatctgcaggggccgatggtggtggctcaccacttgccagtccc
ggttcctgcctagagagcttccgcgccacgcccttcatcgagtgcaacggacggggcaat
tgctccttctaccgcaacacctacagcttctggatgaccacggtcgacgcccaggagatg
ttccaacggcagcggccccaaacccttaaggccggctcgctgcgtacccgcgtcagtcgc
tgccaagtatgtcaaaagcaaatgtaa
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