Asterias amurensis (Northern Pacific seastar): 139945590
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Entry
139945590 CDS
T10870
Name
(RefSeq) RNA-binding protein FXR1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139945590
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139945590
Factors involved in mRNA localization
Other mRNA localization factors
139945590
mRNA cycle factors
Stress granule specific factors
139945590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
Tudor_FRX1
KH_1
Agenet
FXMRP1_C_core
KH-I_KHDC4-BBP
DUF7636
Motif
Other DBs
NCBI-GeneID:
139945590
NCBI-ProteinID:
XP_071799098
LinkDB
All DBs
Position
12:5083727..5111427
Genome browser
AA seq
730 aa
AA seq
DB search
MEELSVEVLDANGAYYKAFIKNIHDKEVTVGFENNWNPEKRVPFSDVRLPPPPSVEEPKD
LKAGDEVEVFSRSYEGEPCGWWHAKIQQIKGEFFVIEYHGYDATYNEIVQGDRLRQPNTQ
PCLSAETFHKVSITVPADIREYARDTKHHQDFLKSTGAFAILYNEDTSSLLVFGNSASLV
RRAELLSDMHFRSIREKMLMMSRAEEAAQQLEVTKSQMEGSVEEFSVSEDLMGLAIGAHG
ANIQNARRVIGVKRIDLDEDTCTFRVFGELDAIRQARTMLEFGEEVCDVPRNLIGKVIGK
NGRVIQEIVDKSGVVRVKIKGDNERDQSSDINIMVPFMFVGTKENIVNARILLEYHLAHL
KDMEELRVQRLQIDQQLRNFNGGYNSGPYFPPPRERGERGYGSDFSEDGGSGRGRRGRGR
GRGGSRGGGRGGLRGGMNSGYSSGRGRSTPEELASGEDGARSSDWAEQVREEREGNKPFD
HKYGPSSSRGMASRPPRGMSRGGSSRGGTSNRGRGRTTQGRGRGRGGHADAPSTGTPPSE
TDEESYRDNRRRRHDEEDTLLEDTTVDEDTNNTEREDDSNRPNRRRPRRRKNRGRGGTMN
GEGLHSGADNHDDTDTSKTNSPMPRRRFGGGTGDKGYSQGNNGAKGSSRPGESSDSPAIN
GNGNGSKFVNNSSAPRGPSNGPKEQRGPRNRRPASQNGPMKSGSDDSTESKPAIKAEVSP
DTPQLVNGTA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctatctgtcgaagtgcttgacgcgaacggtgcatattacaaggcgtttatc
aagaacatccacgataaagaggtcactgtaggttttgaaaacaattggaacccggagaaa
cgtgttccgttttctgatgtccgtcttccccctcctccatcagtggaagagcccaaggat
ctaaaagctggagatgaagtcgaggtattctcacgatcttatgagggagagccatgtggc
tggtggcatgccaagattcagcagatcaaaggagagttctttgtaatagaataccatggg
tatgatgcaacatataatgagatagtacagggagatagattgaggcagcccaacacacaa
ccgtgtcttagtgcggaaacgtttcacaaggtgtccataacagtgccagcagacattcga
gaatatgctagggacaccaaacatcatcaagactttctcaagtcaacgggcgcatttgcc
atcctctacaacgaagacacaagttctctcctagtctttggtaactctgcatccttggtg
cgtcgtgctgaactcctcagtgacatgcacttccgcagcatccgagagaagatgctgatg
atgagccgtgcagaagaggcagcccagcagcttgaggtcaccaagtcccagatggaagga
agcgtggaggagtttagcgtcagtgaagatctgatggggttggccatcggggcacacgga
gccaatatccagaacgcacgacgggtcatcggggtcaaacgcattgatttggatgaggat
acgtgcacgtttagagtctttggagagctggatgccattcgtcaagccaggactatgctg
gagtttggagaagaggtgtgtgatgtaccacggaatcttataggaaaagtaattggcaaa
aacgggcgtgtcatccaggagattgtggacaagtcgggcgtggtcagagtgaagatcaag
ggcgacaacgagcgggatcagtcgtctgatattaacatcatggtaccgttcatgtttgtg
ggcaccaaggagaatatcgtcaatgcaaggattctactggagtaccatctagcgcatctt
aaggatatggaagaactgcgagtccagcgtcttcagattgaccaacagctgcgcaacttc
aatggcggttacaattctggaccctacttccccccacccagagaacggggggagaggggt
tatgggtcggatttctcggaggatggcgggagcggtagagggcgcaggggaagaggcagg
ggcagaggaggctcgaggggaggggggcgaggcggattgagagggggtatgaacagcggt
tacagctctgggcgtggtcgtagcacaccagaggaactcgcctccggtgaggacggggca
cgctccagcgactgggcagagcaagtgagagaagagagggaaggcaacaagccctttgac
cataagtatggtccttcatcgtcaaggggcatggcctccaggcctcctaggggaatgtcc
agaggagggtcctccagaggggggacttccaacagaggtcgcgggaggacgacacaaggt
cgcggcagaggcagagggggtcatgcagatgcacccagtactggtaccccaccgtcagaa
accgatgaggaaagttaccgtgacaaccgtcgccgtagacacgatgaggaagacaccctc
cttgaagacactacagttgacgaggatacaaataatacagagagagaagatgattcaaat
agaccgaatagacgtcggccccgtagacgcaagaacagaggacgagggggtacgatgaat
ggcgagggtctccatagtggagcggataaccacgacgacaccgacacgagtaagacaaac
tcgcccatgcccagacgacgcttcggtggcggcacaggagacaagggttattcacagggt
aacaacggagctaaaggcagctccaggcccggggagtcatcagacagcccagcgataaac
ggtaacggtaacggtagcaagtttgtaaacaatagctcggcaccgaggggtccgtccaac
ggacccaaggaacaacgcggaccacggaatcgccgaccagcgagtcagaatgggccgatg
aaatcgggcagcgatgactccactgagagcaagcctgctataaaggctgaggtgagcccg
gataccccccagttggttaatggtacggcctga
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