Asterias amurensis (Northern Pacific seastar): 139945779
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Entry
139945779 CDS
T10870
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
139945779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamu03021
]
139945779
Enzymes [BR:
aamu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
139945779
Transcription machinery [BR:
aamu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
139945779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
AcMNPV_Ac75
Motif
Other DBs
NCBI-GeneID:
139945779
NCBI-ProteinID:
XP_071799298
LinkDB
All DBs
Position
13:complement(17783089..17815571)
Genome browser
AA seq
1740 aa
AA seq
DB search
MSTFRNKIATKRMQSVSFSSYCSSELRKLSVKEVRNPKSFDDLGHASTSGLYDPVFGPVG
RDDLCGTCFLGTLHCPGHMGHVSLPLPVFNPLFFNLVYRLLRGACLKCHIFQPPRWIIRL
IKLQIKALDRGLLALADEMAEIARTIVSESEEDNYVLADNVETALKERLAAAMKEEGDSD
SSKCQSRHVQDHRRQLIQDFLKQHLLSRSRKCFKCREHIRDFRCEHNSKLLTKTGDKNKM
HLVFVSPQEARTHLRKIMKNEGFILKCVFGMLDVAAAMTGNDEGDPIDYSGVDVDRDESE
EGHSEGGEEDEEEDEVIEDKECPTDLMFLDLLPVIPSKFRPVTGVMDKKFDNPQSANLAK
VIKDCQTLRLLLRHMGEPVKEVNQEKETETIQEEEETEADIDKTFLKMIPGKTNAEKLQN
AWVTLQTHVNNVIDSNLDKLSRDKQPGIKQLLEKKEGLFRKHMMGKRVNYAARSVISPDP
YINADEIGIPDIIAKKLSYPQPVTDWNVRELREAVINGPNVHPGALLIENEDGSQMRLSA
FDPSKREAAAKQLLVPKNIHHGPNSQKKVHRHIRTGDIVLLNRQPTLHKPSIMAHKVRVL
QGEKTLRLHYSACKTYNADFDGDEMNVHFPQNELGRAEAFTIANTSQQYLVPKDGTPLGG
LIQDHMVAGVKMTVRGRFFTRVDYQQLVYNALTDHPGEIRLLPPAIMKPFRLWSGKQVVS
TLLLNVIPEESKPINFKGKAKIGSKSWTWCNRESRTSSFGGTPLSGLSMTESEVIVRGGE
LVCGVLDKANYGNTCYGLVHCCFELYGGQVAVKLLSCLGRLFTTFLQQFTGFTLGVHDIL
ITKKGNYRRRKIMQKAGGIGPDVVASALGYDDSTDITALKERYEEAHRKSADTELREIDL
KMKGQTDRFTNEISNACLSKGLEKEFPYNNLQLMVLSGAKGSQVNCMQISCLLGQIELEG
RRPPLMASGRSLPSFLPYDTSPRAGGYVDGRFLTGIRPQEYFFHCMAGREGLVDTAVKTS
RSGYLQRCIIKHIEGLVVNYDLTVRDSDGCIVQFLYGGDGLDIPRTPFIKEEQLPFLLDN
SANLLGRKCKGEDCDATKAQKIQKKISNWYKKNGSRRRQDRRSPFLSYSSKKMYDLLEER
DSRTKVDGEPISVRDEMIKMWREDDNKEKFLKNASPCPEPVHCQLRPDTNFGSISEKINS
IIENYINNTGVQHLEKYVKSEAEDGIPPEKKFQDLLYLKYRRSLCEPGEAVGLLAAQSIG
EPSTQMTLNTFHFAGRGEMNVTLGIPRLVEILTVASTNIKTPRMDAPLLTTPHAKKRASR
LKKKLTRVVLAEVIEDISVNESYLIIDAVEQYRIFKIRVNFLPHTEYKDEMHIDPSSILE
YVEKRFLKRLTESIKRKTRGLMKVRLVETKKAKEATTEDGEQVTDRPIDEPITMDIEVDA
ASDDEEGEQDGAAGAKSRQQRAEEQEYEEDEEEDLDAEPNSDEEEGESTGSHDEDDMVEE
SIQDEPKVKRKKGQKNTASDKKRRVDDVLEVGQYFISYDFDVEKQEWCEFAIKLHLICSH
LDMMSLIHSEAQQAVVHEAPGIMRCIIADGETDGLKLLQTSGVNLQELCQYDKIIDIQRL
YTNNIHAMANMYGIEAACRVIIKEIQDVFKVYGIYVDPRHLSLIADYMTLEGIYKPFNRI
GLESNSSPLQKMSFESTMHFLKQATTQGVCDPLQSPSARLVVGRVVTGGTGCFDLVQPLV
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgttccgtaacaagatcgccaccaagcgaatgcagagtgtgtcgttctcttcc
tactgtagctcagaactgcgtaagctcagtgtcaaagaggttaggaatccaaagtcgttt
gatgacctgggtcacgcaagcaccagtggactttacgatcctgtatttggtcctgttggt
cgtgatgatctgtgtggaacatgcttcctcggtacattacactgtccaggtcacatgggt
catgtcagcctcccgctaccagtcttcaatccattgttcttcaatttagtctaccggttg
ctgagaggggcgtgtctaaaatgccacatctttcagccacctcgttggatcatccggctc
attaagctccagattaaggctctcgatcgaggattattagctttagccgatgaaatggcg
gagatcgcaagaaccattgtatcagagagtgaggaggataattatgtacttgccgacaac
gtggagacagcattaaaggagcgtcttgcagctgccatgaaagaagaaggtgacagtgat
tcatccaaatgtcagagtcgtcacgtccaagatcaccgtcgtcagctcattcaggatttt
ctgaagcagcatcttctctcccgaagccgtaaatgcttcaagtgtagagagcacatacgt
gatttccgctgtgagcacaacagtaagctcttaacgaagacaggggacaagaacaagatg
catttggtatttgtatcgccccaagaagcacgcacgcacttgcggaaaatcatgaaaaat
gaagggtttattttgaaatgtgtctttgggatgttggacgtcgcagcagcgatgactgga
aacgatgaaggtgacccgatcgattactccggggtagatgtagatagagatgagagtgaa
gaaggacattcagaaggcggagaggaagatgaagaagaggatgaagtcatcgaggacaag
gaatgcccaacagatctcatgtttcttgatctattgcctgtcataccctccaagttcaga
ccggtgaccggagtgatggataagaaatttgacaatccacagtcggccaatctggctaaa
gtaatcaaggactgccagactctacgcctgctcttgagacatatgggtgaaccagtcaag
gaagtgaatcaggagaaagagacagagacgattcaagaagaggaggagacagaagcagac
attgataagacctttttgaaaatgattcccggaaagacgaatgcagagaagcttcagaat
gcttgggtcactctacaaactcacgtcaataatgtcattgatagcaacttggataaatta
tcacgagataaacagcccggaatcaaacagctcctagagaagaaggaaggactgttccgc
aaacacatgatgggaaagcgcgtcaactatgccgctagatctgtcatatctcctgatccg
tacatcaacgcagacgagattggtattccagatatcatcgctaagaagttgtcatatccg
cagccagtcactgactggaatgtacgagagctacgggaggccgtgattaatggacccaac
gtgcatccaggtgctttattgattgagaatgaggatggcagtcagatgagattgagtgcc
tttgatccttcaaaacgtgaggcagccgctaaacaacttctggtacctaagaatattcac
cacggacccaactctcagaaaaaggtgcatagacatatacggacaggagatattgtgtta
ctgaatcggcagccaacactacacaagcccagtatcatggcacacaaggtccgcgtctta
caaggtgagaagactcttcgacttcactactccgcttgcaagacatacaatgctgatttc
gacggagatgaaatgaatgttcacttccctcagaatgagctcggaagagctgaggcattt
acgatagcaaacaccagtcagcagtacctcgtccctaaagacggtactcccctgggtggc
ttgatccaagatcacatggtagcaggggtcaagatgacggtcagaggtcgcttcttcaca
agggttgactatcaacaattggtgtacaacgctctgactgaccatcctggtgagatacgc
cttctccctccagccatcatgaagccattcaggctatggtctggcaaacaggttgtatcc
acactcttactcaatgtgattcctgaagagtcaaaacccatcaacttcaaaggcaaggct
aagattggcagcaagtcttggacatggtgcaacagagagtctcgcacctcatcgtttggt
ggaacacccctctcaggattgtcgatgacggagtccgaagtcatcgtgaggggtggggag
ctggtatgcggggttctggacaaggctaattatggaaacacctgctatggactggtccat
tgctgctttgagttatacggaggacaggtcgcagtcaagctcctgagttgtcttggacgg
cttttcacgaccttcctgcagcagttcactggcttcaccctcggtgtgcatgacatccta
ataaccaaaaagggtaactacagacgcaggaagatcatgcagaaggcaggtgggattgga
ccggacgtcgttgctagcgctttgggatacgatgactccaccgatattacggcattgaaa
gaaagatatgaagaagcacacaggaaatctgctgataccgagctacgagagattgatcta
aagatgaagggtcaaacggatcgattcacaaatgagattagtaacgcctgcttgtctaaa
ggactggagaaagaattcccttataacaatcttcagcttatggtgctgtctggggctaag
ggttcccaggtgaactgtatgcagatttcatgtctgttaggtcagattgaattggaaggg
cgtcggccgcccctcatggcaagtgggcggtccctcccatcctttctgccctatgataca
tccccgagggcgggcggatacgtggatggacgcttcttgaccggtatacgcccgcaggaa
tacttcttccattgtatggctggtcgagagggtcttgtggatactgctgtgaagacaagt
aggagtggatacctgcagagatgtattattaagcacatagagggcctcgttgtgaactat
gacctcactgtgagagacagtgacggttgcattgttcagttcttatacggaggtgatgga
ttggacatcccgaggacgcccttcattaaagaggagcagctacctttccttctagacaac
agcgccaatttgctgggaagaaaatgcaaaggggaagactgtgacgctaccaaagctcaa
aaaatacaaaagaagatctctaattggtacaagaagaacggttcccgtcggaggcaagat
agacgttccccatttctcagctactcctccaagaagatgtacgacttgcttgaggagcga
gacagcagaaccaaagtagacggagaaccaatctcagtccgagatgaaatgatcaagatg
tggagggaagatgataacaaggagaagtttttgaaaaatgcatccccgtgtccagagcct
gtgcattgccagctccgacctgacaccaacttcggttcaatctcagagaaaattaattcc
atcatagagaactacatcaacaacacgggggtgcaacacctagaaaagtacgtgaagagc
gaggcagaagatgggatcccccctgagaagaagtttcaagatttgctgtatttgaagtat
cgtcgctctctgtgtgagccaggagaggccgttggactgcttgctgctcagtccattggt
gaaccctctactcagatgaccttgaatacgtttcattttgctggtcgtggagaaatgaac
gtcactcttggaatccccagattagtagagatcttaaccgttgccagtaccaacatcaag
actccaaggatggatgctccgcttctgactacgcctcatgccaagaagagagcttcaaga
ctcaagaagaaactaaccagggtggtcctggctgaagtaatcgaagacatctctgtgaat
gagtcgtatcttatcattgacgcagttgagcagtataggattttcaagatcagggtgaac
tttctgccacacacggaatataaggatgaaatgcacatcgacccaagcagcatcttagaa
tatgtcgagaaacgtttcttgaaacgtctcacagaaagcatcaaaagaaagactaggggc
ctgatgaaagtccgcttggtggaaacaaagaaagcgaaagaagccacaaccgaagatggg
gagcaggttactgataggccgatagatgaaccaatcaccatggatattgaggtggacgca
gcatcagacgatgaagaaggagagcaggatggagcagccggagccaaatctcgtcaacag
agggccgaggaacaagagtatgaggaagatgaggaagaggatttggacgctgagcctaac
tctgatgaagaagaaggagagagcactggtagtcatgatgaagatgatatggtggaagaa
agcatccaagatgagccaaaagtaaagagaaagaagggccagaaaaatacagcgagtgat
aagaaacgtagagtcgatgatgttcttgaggtcggtcaatacttcatctcctacgatttt
gatgtcgagaagcaagaatggtgtgagtttgccatcaagctgcatttaatttgcagtcac
ttggacatgatgtccttaatccactctgaagctcagcaagcagtggttcatgaggcgcct
ggtatcatgcgttgtatcatcgctgatggtgaaactgatggcctgaaactactacagaca
agtggagtcaacttacaggagttgtgtcaatatgataagataattgatattcaacggtta
tacaccaacaatattcacgcaatggccaacatgtatgggatagaagccgcttgtagggtt
atcatcaaggaaatccaagacgtcttcaaagtgtacggaatttacgtcgatcccagacat
ctatctctcatagcggactacatgacactagagggcatttacaaaccattcaatcgtatc
ggtctcgagtccaactcgtcaccattacagaagatgagttttgagagcaccatgcatttc
ttgaagcaggcaacaacacaaggtgtatgtgatcctcttcagtcaccatctgctcgactg
gtagtcggccgagttgttaccggtggaacaggatgttttgatcttgtacaaccacttgtg
tag
DBGET
integrated database retrieval system
