Asterias amurensis (Northern Pacific seastar): 139945816
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Entry
139945816 CDS
T10870
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamu03036
]
139945816
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
139945816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
HC2
Motif
Other DBs
NCBI-GeneID:
139945816
NCBI-ProteinID:
XP_071799376
LinkDB
All DBs
Position
13:complement(3135272..3184026)
Genome browser
AA seq
2249 aa
AA seq
DB search
MNGEVPSVPITTLSGISSLTDLLTELPLPSPLPCTINNKGLLYSPRVADEAKRLLGLQDE
NLVPQLLHALSQTSTDNIELKDKSSSNEIEGDIPVLLQAILARNPNVFKQKRMEQIGGVS
PRQPMAPSPYYQTSPEGAVQHSPYNRSHMTGMQGSPVPTSVNGYTGHQFSPATATSPSQP
VPTPSPVQGKSRSQLAQPPNGAGPSGDYAQQAAPRGRGRPRKRPPNQDVNQRAAAGKESD
AGVSPADYNSPYHFPGDSHPGQESSSHDTSRDVTESDSSVKDSSRRKKRNKSHKEERERE
KILPQYNIVSSPDTSGSTKIKLKLARPKANLKTAAEPKEKDKLPESGLEPKPEAVNQPEE
TVLTAEPEKILKEPEQVLREEVKKDTSENDVAKEMDNVFVEDVTLDERTGVISAQDTAKP
PKEVTPKRVIPKEVTPKEVTPKKIIPKEVTPKEVTSKEVALKEVTPKGVTPKEVTPKEVT
PKEVTPKEVLTEVTPEKLLKEEGRRTRQLSTPQDKESIGENENGSEDGDSTSKSAISQPR
LLLTKISITEDQAAMMSKPLGRGKKRLRKSTESDEEWEPAPPPASRQEALPSPVSQGPPT
QIFIERGNDDKEEDEEGAPKKKLKRDKTPTKRVAQMDDDELTESATFKRFHAAMEAVFEG
SEEMDLTVEQADDEEETDECNPDLLISKPLLNDLLSESAKLKSMTLMNQIPHERLVRLLN
ILERNIRDGTKVKPNVNHDEGARGERLWRELAMERITHSMDSALTALYIMTSEAMPKEVF
IEDVIDRITNLAKFQLQNSIYPEFDPVYRVSGDKNAVYTNMKMKRARAHGSSEKSILALY
NKLCVLVSNLAELLDIQILTDSTVLMVSSIGTAPFFVENISELQLSAMKLISTVFSKYEK
HRQLILEDIFASLARLPSSKKNLRNFRLNQDTNIQMVTALVLQLIQCVVVLHQPKEDVEN
NQSGSDSEYEYDFDDEDTKKSRDADKDVMIVNTYETAVRTGQNFLSVFLKKCVSRDEEDY
RPLFENFVQDLLSSVNKPEWPAAELLLSLLGRLLMHQFNNRSNDMTMRVSSLDYLGQIAS
RLRKHAVSSNMDQETLDTIVNQTSAACGDESPTDAKDADNRDYIQTLQQSMLDYLSYNSQ
NDPAILFARHFYVAQWFRDTTAEVEQTIKAPRPQRDDSDEDSEGEDPPVDNTTDIIQAAE
RRKLFLKSFIKVSSKSNLSFKRSRHILTYESSSLVARYLASKRPFSQSFDIYLSQILRVL
SETAVAVRTKAMKCLSSVVAADPSVLGRADVQRGVHCRFMDQSTSVREAAVELVGKFVLM
KPELINRYYSMLIERILDTGISVRKRVIKTLRDICIEQPDFPKVPEICNKIIRRVNDEEG
IKKLVNETFQQMWFTPLPTANTDKLLKRALNVIEVVAASKESGYDWLEQLLTNLLKAEED
SRQKPVQKACLQITDCLVEHVLRLELQSTESSAEGKASSQRLVSCLQTLYLFSKVKPALM
LAHAMTFQPYLSTRCSTHGDFLVVHNVARILELVVPLMDHPSEIFLASLEEDMMKLIIRH
GQTVLQSCVSCLGAIVNNVTHNYKLVRDCFQKYFAVLSKLKAEHESNPDSATMAKNKHTL
LRALFTVGLFCKHFDFDAGIKHSKAGDSPRTPRNPHGVQHPSTESPQTVVNNVVPIRERV
FDVLFYFCFHDDEEVKLKAISGAGFLCNRHASFLLGSKIKNMYCDILENREASIKLLCQV
LKNIQLYLTEEDERMRRADAEWNRLGNKEDLKEMGDVQSGMSSSVMQLYLKQVMEAMMHK
QSVVRLSALQVIIATLKQGLVHPVQCVPYLIAMGSDSEGTIRIKADQQLSDIDSRYPGFI
QMKAIAGIKMAFRLQKLLQDDWTSPLRGMREKDSYYSLSNHVYSIIRGHRQHRRALLLCL
LNLFDEQAKTELDLLVFVADNLAYFPYVVQDEPLFVMHHIEITVSVSGANLLQTFKDSFL
KKQPSRPASRSSRSSVDGKKVEFSDDEEEDEDILMNLIPEDPTQLLECCVASQACIMLLV
LKQHLKDMYGFRDSTIHRYSPTEAAKVYDKALNRKSSVMFNPARALELLSVGQPKITLTD
RDKRDIVAEYLDFKQLMELMDPSDDEEDEEKAKAQAAAMASTSSTTTAPNNTSGNAEEDS
RPNAGGAGGSPEAVVAPVRVDDDDSDVAPCSPPSGDVHIHKVKRPKTKSRRPPPKVIKKT
PKPRKKRRKYVDDSDEDDESDESDPDFMV
NT seq
6750 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaagttccaagtgttcccattaccacattgtctggaatttcaagtctcacc
gatctattaaccgagctacccctgccatcaccattaccatgcaccatcaacaacaagggg
ttgttatacagccctcgtgtggcggatgaagctaagcgacttttggggttgcaagatgaa
aaccttgtaccccagcttctgcacgcactcagccagactagcacagacaatatagaactg
aaggacaagtccagcagtaatgaaattgaaggggacatacctgtcttgctgcaagcgata
ctagctcgaaatccgaatgtcttcaaacaaaagcgaatggaacaaattggaggtgtttct
ccgagacaacccatggcaccatcaccatactatcagacatccccagagggcgctgttcaa
catagtccatacaatcgcagtcacatgacaggaatgcaaggctcgcctgttcccacgtcg
gttaacggttacacgggacaccagttttcaccagccacagctaccagcccaagtcaaccg
gttccaactccatcgccagtgcaggggaaatcaagatcacagctggcccaaccgcctaat
ggagctggtccatcaggcgactatgcgcaacaggcagcacccagggggcggggcagacct
cggaaacgcccaccaaatcaagatgtcaatcagagagcggctgctggaaaggagtcagac
gctggtgtttctccagctgactacaattctccttatcacttccctggcgattcgcatccc
ggccaagagagttcctcccatgatacgtcgcgcgacgtcaccgagtcggactcctccgta
aaagactcaagtcgcagaaaaaaacggaataaatctcacaaagaggaacgggagagagag
aagattctaccacagtataatatcgtcagttcgccagataccagcggttcaacaaagatc
aaactaaagctagcgaggcctaaggcgaacttgaagacagccgcagagccaaaggaaaaa
gataaactgcccgagtcggggctagaacctaagcccgaggcagttaaccaacctgaggag
actgtgttgacggccgagccggaaaaaatattgaaagaaccagaacaagttttgagggaa
gaagtgaaaaaggacacctcagagaatgatgttgccaaggaaatggacaatgtgtttgtg
gaagatgttactctggatgagaggactggtgtgattagtgctcaagatacggcaaaaccg
ccaaaggaggtcactccaaagagggtcattcctaaggaagtcactcccaaggaggtcact
cccaagaagatcattcccaaggaggtcactcccaaggaggtcacttccaaggaggttgct
ctcaaagaggttacgcccaagggggtcacgcccaaggaggtcacgcccaaggaggtcacg
cccaaggaggtcacgcccaaggaggtccttacggaggtcactccggagaaactccttaag
gaagagggtcgaaggacgaggcagttgtcgacacctcaggacaaagaaagcataggagaa
aacgaaaatggatcagaagacggagactcaacttcaaaaagtgcaatcagccaacccagg
cttctcctcacaaagatctcaataacggaggaccaggccgccatgatgagtaaacctctc
ggccgcggcaagaagcggttaagaaagagcacggaaagtgatgaggagtgggaaccagct
cctcctcctgcctcgaggcaagaagctcttccgtcgccggtgtctcaaggacctcccacc
cagatcttcattgagagggggaatgacgacaaggaagaagatgaggaaggagcacccaag
aagaagttgaagcgtgacaaaactcctaccaagagagtcgcacaaatggacgatgatgag
ttaacagagtctgcaacgttcaagagattccatgcagcaatggaagctgtgtttgagggg
tcggaggaaatggatctgacagttgagcaagctgatgatgaagaggaaacagacgagtgt
aatccagacttgctcatcagcaaacctctcctgaacgatctcctctccgagtctgccaaa
ctcaaatcgatgacacttatgaaccagattccacatgaaagacttgtgcgattattgaac
atcctggagagaaacattagagatggcacaaaagtgaaacccaatgtgaatcatgacgag
ggtgcccgtggggagcgactatggcgtgagctagccatggagaggatcacccactccatg
gactctgccctgacagccctgtacatcatgacctcagaggccatgcccaaggaggtgttc
atcgaggacgtcatcgaccgcatcacaaatctagccaagttccagctgcagaattcaatc
tatcctgagtttgacccggtgtatcgagtcagcggtgataaaaatgctgtgtacaccaac
atgaagatgaagcgagcgcgtgcccatggctccagtgaaaagtccattcttgccctgtac
aacaaactgtgtgtcttagtctccaacttggccgagttgttagacatccagatcttgaca
gattcaacggtcttgatggtgtcatccattggaacagcgcccttctttgtggagaatatc
agcgagcttcagctcagtgctatgaaactcatatcaacggtgttttccaagtatgagaag
cacaggcaactgatcttggaagacatctttgcgtcgcttgcaaggttgccatcaagtaaa
aagaacctcagaaatttcaggctgaaccaggacaccaatatccagatggtgacagctctg
gtattgcagttgattcaatgcgtcgtggtgttacatcaacctaaagaagacgttgagaac
aatcagagcggatccgattcagagtatgagtacgatttcgacgatgaagataccaaaaag
tcacgagatgccgataaagatgtcatgatcgtgaatacttacgagacagctgtaagaacg
gggcaaaacttcttatcagttttcctgaagaagtgcgtaagtcgagacgaagaggactat
cgacctctttttgaaaactttgtccaggatcttctgtcttctgtcaataaaccggaatgg
cccgcagccgagctgctcttgagtttacttgggagattactgatgcatcagtttaacaat
cgctccaatgacatgacgatgcgtgtgtcgtctttagactaccttggacagattgccagt
aggttaaggaagcacgcagtctctagcaatatggaccaagaaactctggacactattgtc
aatcagacgagtgcagcctgcggtgatgagtctccgacagatgctaaagacgctgacaac
cgagactacatccagacgttacagcagtctatgctagactacctgtcttacaacagtcaa
aatgatcctgctatactgtttgcgagacacttctacgttgctcagtggttccgagacacc
acggccgaggtggagcaaaccatcaaggcaccaaggcctcaacgagacgacagcgatgag
gacagcgaaggggaagaccccccggtggacaacaccaccgatatcatccaagctgccgag
aggaggaaactcttcttgaagtctttcatcaaagtctcctccaagtccaacctttccttt
aagagatcaagacacatcttaacctatgagagttcatcccttgtagctaggtaccttgcc
tccaagagacccttctcacaaagttttgacatctatcttagccagattctgcgggtgctt
agcgagacagcagtagctgtaagaacgaaagcgatgaagtgtttgtcctcggtggtagca
gctgatccttctgtcttgggcagggctgatgttcaacggggagtgcactgtaggttcatg
gatcagtccaccagcgtcagggaggctgcggtagagttagtcggcaagtttgtgctgatg
aagccggagttgatcaatcgctactacagcatgctcattgaaagaatacttgatactggt
atcagtgtacgtaaacgagtcatcaaaacactacgtgacatctgcattgagcagccagac
ttccccaaggtgcctgaaatttgtaacaaaatcattcgtcgagtgaacgacgaagaagga
atcaagaaacttgtgaatgagacattccaacagatgtggtttacgccgttgccgacggcg
aacacggataaacttctcaagagagcccttaatgtcatcgaggttgtcgcagcgagcaaa
gaatcaggctatgattggctggaacaacttctaacaaacttattaaaagcagaggaagac
tcgagacagaaaccagtacagaaagcttgtttgcagatcacagactgtctggttgaacat
gtactcagattagaactacagtcgacagaatcgtctgctgaaggcaaggccagcagtcag
cgtctcgtcagctgtcttcagacgttgtatctcttcagtaaagtcaagcctgccctcatg
cttgcccatgccatgacatttcaaccctacctcagcacaagatgcagtacgcacggtgat
ttccttgtggtgcacaacgtcgcccgtatcctggagctagtggtgcctctgatggatcac
cccagcgagatattcctggccagtttagaagaagacatgatgaagctcatcatcagacat
ggtcaaacagttttacagagctgtgtgagctgccttggtgctattgttaataacgtcaca
cacaactacaaactagtaagggactgcttccagaaatactttgccgtgctgtccaaactg
aaagctgagcatgagtccaaccccgacagtgccaccatggctaaaaacaaacacacactc
ctgagggcgctcttcactgttgggctcttctgtaaacactttgattttgatgctggcatc
aaacactcaaaggcaggagacagccccaggaccccaagaaatcctcatggcgtacaacat
ccctcgaccgaaagtccacaaactgttgttaataatgtggtaccgatacgagaacgcgtc
ttcgatgttctcttctatttctgtttccacgatgatgaggaggtcaaactgaaggccatc
agtggtgctggcttcttgtgcaatcgtcatgccagcttcctactgggttctaagattaag
aatatgtactgcgacatcctggagaatagagaggcctccatcaagcttctctgccaggtt
ttgaagaatattcagctgtatctgacggaagaagacgagagaatgagaagagctgatgct
gagtggaatcgtcttggcaataaggaagacttaaaggagatgggagatgtccagtcgggc
atgagcagttccgttatgcagctgtatctgaagcaagttatggaagccatgatgcacaaa
caatctgtcgtacgtctgtcggcgttacaagtgatcatcgcaactcttaaacagggtctt
gtccatcctgtacagtgcgttccatatctcatcgccatggggagtgacagtgaaggaacg
atcagaataaaagctgaccagcagttatccgacatcgacagcagatatcctggctttatt
cagatgaaagccattgctggcatcaagatggcgtttcgccttcagaagcttctccaggat
gactggacgagtccgctgcgtgggatgcgggagaaggatagctactacagcctgtcgaac
cacgtctacagcatcatcaggggacatcgtcaacacaggagggcgctcttactctgctta
ctcaacctattcgacgaacaagcgaaaacggaactagatcttcttgtgtttgttgccgac
aaccttgcctacttcccttatgtggttcaagatgagcctctgtttgtcatgcatcacatt
gagataacggtgtcagtatccggagccaatctactgcagacatttaaagattcttttcta
aagaagcaaccatctcggccggcgtcccggtcgtcgaggtccagtgtggacggcaagaaa
gttgagttcagtgacgatgaagaggaagatgaagacatcctcatgaacctcataccggaa
gacccaactcagttactggagtgctgtgttgcatcccaggcctgcatcatgcttctggtt
cttaagcaacatcttaaagacatgtatggcttcagggatagcacgatccacagatactcg
cccacggaagcagccaaagtatacgacaaagcgttgaatcgcaaatctagcgtgatgttc
aacccggcgagggcgctagagcttctgagtgtcggtcagccaaagataactctgacagac
cgagacaagagggacatcgttgcagagtatttagatttcaagcagctgatggagctgatg
gatccctcagatgacgaggaggatgaggagaaagccaaggcccaggccgctgcgatggcc
tctacctcctctaccaccacagcgcccaacaacacctcagggaacgctgaggaggacagc
aggcctaacgctggtggagctggagggagcccggaggcagtggtggccccagtcagggtg
gatgatgatgactctgatgttgcgccgtgttcaccgccatcaggagatgtacatatacat
aaagtaaaacgaccaaagaccaaaagccgacggccgcctccgaaggtaatcaagaaaacg
cctaagccgagaaagaagcgacggaaatatgttgacgacagtgatgaagatgatgagagt
gatgagagcgatccagacttcatggtctaa
DBGET
integrated database retrieval system
