Asterias amurensis (Northern Pacific seastar): 139945930
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Entry
139945930 CDS
T10870
Name
(RefSeq) general transcription factor 3C polypeptide 3-like isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamu03021
]
139945930
Transcription machinery [BR:
aamu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
139945930
TFIIIC, fungi type
139945930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_8
TPR_1
TPR_16
HAT_PRP39_C
ARM_TT21
TPR_12
TPR_CcmH_CycH
TPR_7
TPR_11
TPR_20
TPR_6
TPR_9
TPR_Slam
ANAPC3
TPR_15
TPR_MalT
TPR-S
ARM_TT21_5th
T7SS_EccA1_N
PknG_TPR
Suf
DELLA
ChAPs
FkbO_Hyg5-like_N
Motif
Other DBs
NCBI-GeneID:
139945930
NCBI-ProteinID:
XP_071799550
LinkDB
All DBs
Position
13:5774017..5791133
Genome browser
AA seq
903 aa
AA seq
DB search
MEEGTDDQKLSVDREELIRYLNGEISFTEWQKLQGQDVMQLLSSEEQLGAEDAPEEGADM
DEDASDESDEEEEEHKDAEEERENPEGERGEDDDGVSDSGDGEEEGEGDLRGDDDEYVPP
RSRQSAYKPRGKVGRPRKPPPEQLTPKRGRGRPRKDRSDISGLSSTSQADNSPLSHEMRL
GRAEKRQLAKRGRKKGHSRVPKGLQGLMGEAHLCFARGGHQEAIKMCLEIIRQVPRCPDP
YQLLSMIYEDKQDMEKSLQFSLIACHLNPSDSEEWTRCAETCLEQDDIDKAIHCYSKAIR
YNPSDLSNHMERIHLYEQLQDKKKVLDCYQVLLKALPEDQGEQYMQLAKDIVKAHHQDGD
IKPALEIIETAFSKYPHLIRSEDVNILAELHIVNRKYQQALQVMSDHCGVIIKSKDDNSA
VLEMEQLSLSERDNGQDIMDVTVPEGLPIDLIAKLGVCLIHCKQFQTVKGVVEMLSAKSP
NEMGDLYLDVAEAYIDLGHFVDALSLLEVLVDTENYNLAAVWLRYAECLTSLGELGSAAN
AYRQVLQKVPNHLDARIALAMVERKRGNEDVALEILSVVSEDHTSDVQVVRQRSLLLYSK
GFLKEFIQDGLLLLRAYVKDAYQHHGGSVSDNQLCGNLSHLDHDEWYTLYCKTLRALVQT
GQLAEAQTLSNSAIVSKRFGITLKRKLDVEFMGVCVCFLNKNYKVAYDEIRHFLYKYPNC
AAAWNFFSYITNLSNDTRHHRFCLRLTINKLQNNFALCILNGHNAMVSGSFKNAVGEYVR
GFRQRVDDPFVNMMIGVSIAHMACQRFTIKRNSLFVQAFAFLKRYEEYRGVCQETCYNIG
RTLHQIGLLHMAARYYHKGLELPPSTDDPRFDLRAELAFNLSLIYRHSGNEEMAIELLSN
TVI
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggaacagatgatcaaaaactgtcagttgatcgagaagagttaatcagatac
ttgaatggtgaaatatccttcactgaatggcaaaaacttcaaggacaagatgtgatgcag
ctcctcagttcagaggagcagttgggcgccgaagacgcacccgaagaaggagccgatatg
gatgaggatgcaagtgatgagagtgatgaagaagaagaggaacacaaggatgcagaggag
gaaagggagaatccagaaggagaaagaggggaagatgatgatggagttagtgacagcgga
gatggggaggaagagggggagggggatcttcgtggtgacgacgatgaatatgtgcctccg
agaagccgacagtctgcttataagccaagaggaaaagttggtcggccgagaaaaccgccg
ccggaacagcttactccaaagagaggtagagggcgccctcgcaaggatagaagtgacatt
tccggcctctcgtcaacatcacaagcagacaactcgcccctttctcacgaaatgcgtctc
ggaagggcagaaaagcgacagttggccaagcggggccgtaagaaaggtcacagtcgggtt
cccaagggtctgcaagggctgatgggagaagcccacttgtgcttcgcccgtggtgggcac
caggaggccatcaagatgtgcctagagatcatcagacaggttccccggtgcccagaccct
taccagcttctgagtatgatttacgaggataaacaagacatggagaaatcacttcagttt
tctctgatagcatgccatctcaatccaagtgactctgaagaatggactcgttgtgctgag
acgtgcctagagcaggatgatattgacaaagctatccattgttattccaaagcgatccgg
tacaatcctagcgatctgagtaaccatatggagagaatccacctgtatgagcagctacag
gacaagaagaaagtgttggattgttaccaggtcttactgaaagctttacctgaagaccaa
ggggaacagtatatgcagctggccaaggatattgtcaaggctcatcaccaggatggagat
atcaagccggcactagagatcatcgagacggcattctctaaatacccacatctcatcagg
tccgaagatgtgaacattttagccgagctccacatagtcaatcgcaagtatcagcaagct
ctacaagtcatgtcagaccactgtggggtcatcatcaagtccaaagatgataacagtgct
gtcctcgaaatggaacaactctcattgtccgagagagataatggacaggacatcatggat
gtaacggtaccggaggggttgccaatagacctgatagccaaactaggagtgtgcctcatt
cactgcaaacagttccaaactgtcaagggagtggttgagatgttgtctgctaagagtcca
aacgagatgggagatttatatctggatgttgcagaggcgtacatagatctgggtcatttt
gtagacgcattgtcgttactggaagtactagtcgacacagagaactacaacttggccgct
gtatggcttcgctacgctgagtgccttacttcgcttggggagttgggatcagcagccaac
gcctaccgccaggtcctacagaaagtacccaaccatctcgatgctagaattgctctcgca
atggtggaacgtaaaagaggaaatgaagatgtagcgctagagatcctatcagtagtatca
gaagatcacactagtgatgttcaagttgtgaggcagaggtcgttactgttgtactctaag
ggatttcttaaagagttcatccaagatggtctactcttgctgagagcttacgtcaaagat
gcctaccagcatcacggaggaagtgtctctgacaatcagctgtgcggtaacctgagtcat
ttagaccatgacgagtggtatactctctactgtaagacactccgagctctcgtacagacc
ggtcagcttgctgaggcgcagaccctatccaattccgccattgtctccaagaggttcggc
attacgctcaagagaaaattggatgtagagtttatgggagtctgcgtttgtttcctgaac
aaaaattacaaagtggcttacgatgagattcgacacttcttatacaaatatccgaactgt
gcagctgcctggaatttcttctcatacatcaccaacctcagcaatgacacccgccatcac
cgattttgccttcgcttgacaatcaataaattacaaaacaactttgctctgtgtatactg
aacggccacaacgccatggtcagtggtagtttcaagaatgctgttggggagtacgtgcga
gggtttcggcaaagagtagacgatccgtttgtgaatatgatgattggcgtttccattgca
cacatggcatgccagcgattcaccattaagaggaactctctctttgttcaggcgtttgca
tttctcaagagatacgaggaatacagaggggtctgtcaagaaacatgctacaacatcggc
cggaccctccatcaaataggtttacttcacatggctgctcgttactaccacaaggggctt
gagctaccgccctctactgacgacccaaggtttgaccttcgagctgagcttgcttttaat
ctctctctgatctatcgacacagcggcaatgaggaaatggccattgaactattgagcaat
actgtgatatga
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