Asterias amurensis (Northern Pacific seastar): 139945993
Help
Entry
139945993 CDS
T10870
Name
(RefSeq) protein patched homolog 1-like isoform X1
KO
K06225
patched 1
Organism
aamu Asterias amurensis (Northern Pacific seastar)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
139945993
NCBI-ProteinID:
XP_071799667
LinkDB
All DBs
Position
13:5137340..5231315
Genome browser
AA seq
1370 aa
AA seq
DB search
MTWSTKTLGIAGRENRSSIVKLQNGGESGLANKEYQDGRISTPGPPEDYVYEELLTRTSW
CNAEYASREIERGRAQGNKSALWLRGKLQALLFFLGCYIQFHSGKVLFLGVIIMGAFAVG
LKQARIETDVEKLWVEVGGRLERELDYTTKTLGEGWGITNQIIIQTPKEDGGNVLTQEAL
LQHVRSSFLATQVQVSMYGLDWSFKDVCFITEFPAFEDSFIDPIISKLIPCTIVTPLDCF
WEGSRLLGPDEPVKVPSYNQTLKWKTLDPLALLDDFNHIFSIYGDFISGDSLKDLFNRTG
IGHAYQTKPCLNPLDPECPNSAPNKQSGQIPDIASELTGGCKGFASTYMVWPEELIVGGV
NKNSTGHIQSAEAIQSIVQLKGQKEMYNAWKGNYKVDEIRWTPEKAGAIVEEWQRKFTEV
VRNSSVEVSQNVNAFTSASLTDLLDEFSELSIVRVAMGYVLMVIYAFFTMMKLSDGVRSQ
GGIGLAGVLLVAGSVVASLGFCAWIGLVFNASTTQVLPFLALGVGVDDMFLLAHSSTSIP
NEIPLVYKTGEILRRSGVSVLLTSINNICAFLLAAVIPIPALRSLSLQFAIVIVFNFLAI
ILVFPAILALDIERREAKRVDMFCCITSKSPSANRIIRVQPRPANTRQVPPRCTEVRLQS
NVQAVTVLHPSSATTTAGITPVVETPPSTAASTASTRTLIRQSSFERDRPSLRERYRKAS
CWRWSLSGFARGYYAPFLQKLQVKIVVLVLFACLLGVGIYGVTQIEDGLEITDIVPRGTP
EEDFLETQMKYFSFYNMYGVTQEDFDYANRQRLLHAYHSEFRNIMQVIRDPDGSLPTFWL
IAFRDWLLEMQREFDKDKKGNAIIYNNWYNNASEKGVLAYKMLIQTGNPVQPTDYNRFTS
ERLVDDHGVINPDGFYHYLTVWYNSDTFSYSATQAMLHPTPTSWTPGGKTDRDVEIPRSS
TLNYTQLPFYLNNLRDTDDFINVVRDVRNLSEYFNDQGLPNYPMGVPFTFWEQYLELRFY
LFLSLLSVLGASFFVMTVMLANPWAALILVSVLGMITTELFGFMGLIGVKLSAIPAVTLI
ISVGIGVEFTLHTCYAYLTAIGDRNKRVTMALEHTFSPVVDGALSTLLGVVMLAGSEFDF
IVSYFFYVFSALIVIGMLNGLILLPVILSLIGPPAEVRPLNNATRLTTPTPPPTPPMERS
SASMQGRQRPGRRRGWEDEYNGSQSSVGDSAMYRGYGGERIEVHPPEVVVQTMCHEPRRQ
EGKPHKSRPHWPHHQSRVHHPNMPHYTSSSSSSPSHSPQMPHHQMTTTVTATAMVSILHP
MCGGGGSAGERTDSYKYHKRRRDQTEKKSTKMRELEGRREKDDGNSDSPV
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggtcaaccaagacgctaggaatagctggtcgcgaaaaccggtcttcaattgtg
aaattgcaaaacggtggcgagtcgggtttggcgaacaaggaataccaggatggaagaata
tctacaccggggccaccagaggattatgtttacgaagaactccttacaagaacaagttgg
tgcaatgccgagtatgccagcagagaaatagaacggggtcgggcacaggggaacaagtct
gcactttggcttcgtgggaaactccaagctctactcttttttctcggctgctacatccag
tttcacagtgggaaagtactgttcttgggagttataataatgggagcgtttgctgttggt
ctcaaacaagccagaatcgaaacggatgtggagaaactttgggtagaagtcggcggaagg
ttggaacgagaactagattacaccaccaagacgttgggagagggatgggggatcaccaat
cagatcatcatacagactcccaaagaagacgggggaaacgttttaacgcaagaggctctg
ctccagcacgtcagatcctcgttcttagcaactcaagttcaagtcagcatgtatggccta
gactggagtttcaaagatgtttgttttataacagagtttccagcctttgaagatagtttc
atagatcctataattagtaaattaattccttgtacaatagtaacgccattagattgtttt
tgggagggatcaaggcttctgggcccggatgaaccagtcaaagttccatcttacaaccag
accctgaaatggaagacgctcgaccccttagccttgttagatgacttcaatcacatcttt
agtatttatggggattttatatcaggagattcgttaaaagatctcttcaataggacggga
atcggccacgcctaccagactaagccttgtctcaacccactggaccccgaatgtcccaac
tcagcacccaacaagcaaagcggacagataccagatattgcttctgaacttacaggtggt
tgcaaaggctttgccagcacatacatggtctggccagaagaactaattgttggaggtgtg
aacaagaactccacaggccacattcaaagtgccgaagctatacagagtattgttcaactc
aaggggcagaaggagatgtacaacgcctggaagggaaactacaaggtggatgagatcaga
tggacaccagagaaggctggagcgattgtcgaagaatggcagaggaaatttactgaggtt
gtcaggaacagttcggtagaggtctcccaaaacgtcaacgcattcacatctgcttctctg
acagacttactggatgagttttccgagctgagcattgtacgggttgcaatgggatatgtc
ctcatggtgatctacgctttcttcacgatgatgaaactaagcgacggcgttcggtctcag
ggcgggataggactcgctggagttcttctcgttgctggctcggtggtggctagcctcggc
ttctgcgcatggatcgggctggtgtttaatgcatccacaactcaggtgctcccatttctt
gctttgggggtgggcgtcgacgatatgtttcttctggcacactcttctacctcaataccc
aatgaaattccacttgtgtataagacgggtgagattttacgccggtccggggttagcgtc
ctcctgacctctatcaacaatatttgtgcctttcttctagcagctgttattcctattccc
gctctgcggtccctctcacttcaatttgcaatagtaatagtattcaactttctggctata
atccttgtgttcccggccatcttggcgttagatatagaaaggcgtgaagcaaaacgggtt
gacatgttctgctgtataacaagtaaaagtccaagtgcaaataggatcattcgggtccaa
cccaggcctgccaatacaagacaggtaccccctcgatgtacggaagtccggctgcaatcc
aatgtgcaagcggttacagtcttacatccgtcgtcggcgacgaccaccgctggcataacg
ccagtcgttgaaacaccgccctcaacggccgcttcgacggcctccaccagaactcttata
aggcagagctcttttgaaagagacagacccagtttacgggagagatacaggaaggccagt
tgctggaggtggagcttatcaggatttgcgcgtggatattatgcgccgttcctgcagaag
ttacaagtgaagattgtcgtcctggttttattcgcatgtttgctcggagttggaatctac
ggggtaacgcaaatcgaggatggattagaaataacggacattgtccccagggggacccct
gaagaggacttcctggagacgcaaatgaaatatttcagtttctacaacatgtacggcgtg
acccaggaggattttgattatgcaaaccgacagcgactgctccatgcttatcattcggag
ttccgaaacatcatgcaggtgatccgggatcctgacggctctttgccaaccttctggttg
atcgccttcagggattggctgcttgaaatgcaaagggagtttgacaaggataagaaaggc
aatgccattatttataacaactggtataacaatgcctcagagaaaggagtcttggcctac
aagatgctgattcagacgggcaacccggtgcagcccactgactacaacaggttcacttcg
gagcgactagttgacgatcacggagtgatcaaccctgatggattttatcactatctgacc
gtctggtataactctgacactttctcctactccgccacccaagctatgcttcatcctaca
ccaacctcgtggacaccaggaggtaaaaccgaccgagatgtcgaaataccccgatccagc
accctcaactacacccagctcccgttctatctcaacaatcttcgggacaccgacgatttc
atcaacgtggtacgagacgtccgcaatctctcggagtacttcaacgatcagggtcttccc
aactatccaatgggggtgcccttcaccttctgggagcagtacctagagttgaggttctat
ctcttcttgtcgttgctgagcgtcctcggagcaagcttctttgtgatgactgtcatgctg
gctaatccatgggcagctctcattctggtatctgttttagggatgataacgacagagctc
tttggtttcatgggtttaatcggagtcaagcttagcgccatcccagcggttaccctcatc
atatcagtgggaataggagtggagttcacgcttcatacatgctatgcctacctgacggcc
attggcgaccgtaacaaacgtgtcaccatggctctggagcatacgttctctcccgttgtt
gatggtgcgttgtcaacactgctgggtgtcgtcatgctagctgggtccgagtttgatttc
atcgtgagttacttcttctacgtcttctctgcgttgatcgtcatcgggatgttgaatggc
ctcatcctgctccccgtaatcctctctctgatcggccccccagccgaggtacgcccactg
aacaacgccacccgactcaccaccccgaccccacctcctacaccgccgatggagaggagc
agtgcctccatgcagggccggcagcgcccgggcagaaggagaggctgggaggacgaatac
aacgggtcgcagtcgtctgttggcgacagcgccatgtatcgtggatacggcggagaaagg
atcgaggttcatccacctgaggtggttgtgcagacgatgtgccatgaaccaagaagacaa
gagggtaagccgcataaatcacggccccactggccccaccaccagtctcgggtccaccat
cctaacatgcctcactacacatcctcctcctcctcttcgccaagccactcccctcagatg
cctcaccaccagatgacgacaaccgtcacagccacagcaatggtgtccatccttcacccc
atgtgcggcgggggtggtagcgccggggagcggacggacagctacaagtaccacaagagg
cggagagaccagacggagaagaagagcacgaagatgcgggagctcgaagggagaagagaa
aaagatgatggcaactcggactcacctgtgtaa
DBGET
integrated database retrieval system
