Asterias amurensis (Northern Pacific seastar): 139946394
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Entry
139946394 CDS
T10870
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139946394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139946394
Spliceosome [BR:
aamu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139946394
Complex C
U4/U6.U5 tri-SnRNP related factors
139946394
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Plasmodium_Vir
Motif
Other DBs
NCBI-GeneID:
139946394
NCBI-ProteinID:
XP_071800140
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All DBs
Position
13:complement(18481913..18488626)
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AA seq
349 aa
AA seq
DB search
MANRTVKDAHSVKGTNPQYLVEKIIRSRIYESKYWKEECFALTAELLVDKAMELRYIGGT
YGGNIKPSPFLCLILKMLQIQPEKDIIIEFIKNEDFKYVRALGATYMRLTGESLDIFKYI
EPLYNDYRKIRKQDKEGDFYLSHVDEYMDELLHEERVCDIILPRLQKRQVLEDTEQLEPR
VSALDDDLDEAESSSDEEMEAQEVRRSPERSRSGRHRSPSPKRRRSRSRSPPRRRSRSPR
KRSPSPRRERRRSPRRNRSRSRERRHRSRSPAHRHRDDDRSRTHRHRSKSPEDHRKEKSH
KSSSRHSRSERGSERDKDEGKRSGGPKTEAGEIAAMNELRASLGMGPLK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgcacagtgaaagacgcgcacagcgtcaaaggcacaaatccacagtatttg
gtggagaaaatcatcagatctcggatctacgaatcaaagtactggaaagaggaatgtttt
gcgcttacagccgagttattggtggacaaagccatggagcttcgttacatcggtggaacg
tacggaggtaacatcaagccgagccccttcctttgcctcatattgaagatgcttcaaatt
caaccggaaaaggatatcatcatcgagttcattaagaatgaggattttaagtacgtccga
gccttaggagctacatacatgaggctgacgggtgaatcgctggacatcttcaagtacata
gagccgctctacaacgactacaggaagatcagaaaacaagataaagaaggagatttttat
ctgtctcatgtcgacgagtacatggatgagttactccatgaggagagagtttgcgacatc
attcttcctcgactgcagaaacgacaggttcttgaggataccgagcagctggaaccaagg
gtcagtgctctcgatgatgatcttgatgaggcagaatcatccagtgatgaggagatggag
gcacaggaagtacgccgatccccagagagaagccgaagtggcagacaccgaagcccctca
ccaaaacggcgaagaagtcgtagtcgatctccacccagaagacgaagtcgctcacctcgt
aagagaagtccatcaccgcgtagagagcgcagacggagcccgcgtagaaatcgcagcagg
tctcgggagagacgccatcggtcacgatcccccgctcacagacatcgtgatgacgacagg
agcagaactcatcggcatcggtcgaaatcaccggaggatcataggaaggaaaagtcccac
aagtccagcagccgccacagccgctcagaacgaggctccgaacgtgacaaagacgagggc
aaacgcagcggaggacccaagacagaagctggggagatcgccgcgatgaatgaactaaga
gctagtctaggaatggggccacttaagtag
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