Asterias amurensis (Northern Pacific seastar): 139946523
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Entry
139946523 CDS
T10870
Name
(RefSeq) fizzy-related protein homolog isoform X1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139946523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamu04121
]
139946523
Ubiquitin system [BR:
aamu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
139946523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
eIF2A
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_SCAP
Tricorn_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT80_2nd
WD40_RFWD3
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
139946523
NCBI-ProteinID:
XP_071800309
LinkDB
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Position
13:14706311..14722339
Genome browser
AA seq
492 aa
AA seq
DB search
MNQDYEKRLLSQQNGQGSVGSPILTPLSPGQAASPNKDRYSDRFIPSRAGTNWYVGFNSI
QEQNEELPTATRRPKDETDTSKGKATDMLAYHCLLKNELLGANIDKIKDPQCEDRRMVSP
QKAKRNLFQYSVQSKRPSVAKSEDSSSYSLSPVGSKSQKLLLSPRKPMRKISKIPFKVLD
APELQDDFYLNLVDWSSTNILSVGLGTCVYLWSACTSQVTRLCDLSVDGDTVTSVSWNER
GNLVAVGTHKGLVQVWDSSTQKRVNTLKGHSARVGALAWNADMLSSGSRDRMILQRDVRT
PTTPERRLAGHRQEVCGLKWSPDHQHLASGGNDNKLFVWNNSSLTPVQQYTEHLAAVKAI
AWSPHQHGLLASGGGTADRCIRFWNTLTGQPLNSVDTGSQVCNLAWSKHDNELVSTHGYS
QNQILVWKYPSLVEVAKLTGHTYRVLYLAVSPDGEAIVTGAGDETLRFWNVFSKSRSSKE
SKSVLNLFNHIR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagactatgagaaacgacttcttagtcagcagaatggccaaggatctgtgggc
tcaccgatattaacaccgttgtctcctggtcaagctgcatcccctaataaagacagatac
agcgacagattcattccaagtcgtgcagggaccaactggtatgttggatttaactcaatt
caagagcagaatgaagagttaccgacggcaacaagaagacctaaagatgagactgatacc
agcaaaggtaaggctacagacatgctagcctaccactgtctcctgaagaacgagcttctt
ggagctaacatcgataagattaaagacccacagtgtgaagataggcggatggttagccca
cagaaggccaagagaaatctattccagtatagcgtccaatccaagagacccagcgtggct
aagagtgaagactcttcatcatattcactgtcacctgtaggaagtaaaagccaaaagctt
ttactatcacctcgtaaaccaatgcgtaagatatccaagattcccttcaaggtgctggat
gctccggagctacaagatgacttctatcttaatctggttgattggtcctcaacgaatatc
ctgagtgttggtctgggaacctgtgtctatctatggagtgcatgtacaagtcaggtaact
agactgtgtgatttatcagtggacggtgatacagtgacatcggtatcttggaatgaaagg
ggcaatttagttgctgtaggaacacataagggactggtacaagtatgggactcgtctacc
cagaagcgggtcaacacacttaaaggtcactcggcaagagtaggtgctttggcatggaat
gcagacatgttatcatcaggtagtagagatcgaatgattctacagagagatgtacgcacc
ccgaccaccccagagagacgtcttgccgggcatcgacaagaagtatgcggcttgaaatgg
tcacctgatcatcaacatctagcctcaggaggaaacgataataagttatttgtttggaac
aactcaagtctaacgccagtgcagcaatacactgaacatctagctgccgttaaagccata
gcttggtcaccccatcagcatggtctactagcctcagggggcggtacggccgatcgatgt
atccgtttctggaatacgttaactggacaaccactcaactcagtagatacaggctcacaa
gtctgcaatcttgcctggtccaaacatgacaatgaattggtgagcacacatggttattca
cagaatcagatcctggtgtggaagtacccatcattggtagaagtagccaagctaactggg
catacctatagagtcttgtacctggctgtatctcctgatggggaagccatagtaacagga
gctggggatgaaactttaaggttctggaatgtcttcagcaaatcaagatcatcaaaggaa
tccaagtccgtcttgaatctatttaatcatattagataa
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