Asterias amurensis (Northern Pacific seastar): 139946601
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Entry
139946601 CDS
T10870
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03018
RNA degradation
aamu03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139946601
mRNA degradation factors
5'-3' decay
Lsm complex
139946601
Spliceosome [BR:
aamu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139946601
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
139946601
NCBI-ProteinID:
XP_071800400
LinkDB
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Position
13:complement(14108365..14150362)
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AA seq
138 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVVAKGRGRGGGQQRGRGRGGPGRGGTFGRGGGRGGRGG
NRGGRGGGGGGGGGPPLR
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgttgccattatctttgctgagaactgcgcaaaaccaccccatgctggtggagttgaag
aatggggaaacatataacggacatcttgtcgcttgtgacaattggatgaatattaacctc
agagaggtcatctgcacatcaagggatggagacagattttggaggatgcctgagtgctac
atacgaggcagcactatcaagtacctccgcattccggatgaggtaatagacatggtcaag
gaggaagtggtcgccaagggacgtggcaggggcggaggtcaacaaagagggcgtggtaga
ggtggaccaggaagaggaggaacgttcggccgaggaggtgggcgtggaggtcgtggaggc
aacaggggaggaaggggaggaggtgggggtggtggtggtggacccccgttgcgttag
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