Asterias amurensis (Northern Pacific seastar): 139947138
Help
Entry
139947138 CDS
T10870
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139947138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamu03400
]
139947138
DNA repair and recombination proteins [BR:
aamu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139947138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
ATPase_2
Motif
Other DBs
NCBI-GeneID:
139947138
NCBI-ProteinID:
XP_071801096
LinkDB
All DBs
Position
14:16488605..16509160
Genome browser
AA seq
931 aa
AA seq
DB search
MALKSNDAFADNAPEDGFLKCLRSMPVKPATTFRVFDRTEYYTVHGEDAMFAAKECFKTL
GVVKYTGSGEKKVPYVNLSKMNFESMVRDLLLVRQYRVEMYKNMATGKGNDWQVAYKASP
GNLTQFEEILFGNNDMSTSASVIAVKYVSEGSGGQLTVGVGYADATLRELAVCQFTDNEH
FSNLEALLVQLGPKECLIQSQSGEGAVDSAKLTGVLERSGLLVTERARADFGTKDVEQDL
NRLLKGASEEQRNAATLGEMEKTTAVGSLAALIKYLELLGDESNFRQFRLKSFDLTQYMR
LDSSAVRALSLLPSPQDGGNKNACLLGLLNKCKTPQGQRLLAQWIKQPLVDKNKIEERLD
IVEAFVNDVELRQTLQEEQLKRIPDLQRLAKRIQRKKATLEDCYRIFQVVEFMPVLLETL
ERPGIDLLKEVFSNPIMELLLDFAKYQQMVETTIDLDQVKNHEFLIKPDFDEELTNLREK
MDGLENNIQAQLGKAARDLGLEANKTIKLESNNQLGYFFRVTRKEEKVLRNNKKYATIDT
NKNGVRFTQSTMRSLNEEHMSAKEEYNEMQKAIVAEIIGIAAGYVDRMMLLSDIIAQLDV
LVSFAHVSSNAPISYVRPTLSEKGQGGIKLVEARHPCLEVQDDVAFIPNGVTFEREKQMF
YIITGPNMGGKSTFIRQIGVVVLMAQLGCFVPCRSAEISIVDSILARVGAGDSQLKGVST
FMSEMLETASILRSASENSLIIIDELGRGTSTYDGFGLAWAISEHIATKISGFCLFATHF
HELTALADDVQTVNNLHVTALTTDGQLTLLYRVKPGVCDQSFGIHVAELVHFPKKVIDYA
KMKALELEDYQSTGASGGGSMEGLDAPAAKKRRLEKQEGEMIIDDFLKKVKQLDTETMSD
EHVYEAVQRLKEEVAKKSSPYVQEVLSRSDI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaagtccaatgatgcctttgcagacaacgctcctgaggatggatttttaaag
tgtctgagatcaatgcccgtgaaaccggcaacaaccttccgagtttttgaccgtacagag
tattacactgtccatggtgaagatgcaatgtttgcagcaaaagaatgtttcaagacactc
ggtgtagtcaagtacacaggatcaggagagaaaaaggtgccatatgtcaacctgagtaag
atgaactttgaaagcatggtgcgagatcttctactcgtacgacagtatcgtgttgagatg
tataagaacatggcaacggggaaaggcaatgactggcaggtggcttacaaggcttctcct
ggtaacctcacccaatttgaagagatcctcttcggtaacaacgacatgtcaacgtcagcc
agtgtgattgctgttaagtacgttagcgagggctcaggggggcagctgactgttggagtc
ggctatgctgacgctactctgagggaactagccgtgtgtcagtttactgacaatgagcat
ttctccaacttggaggccctactggtgcagctgggtccaaaagagtgcctgatacaatca
cagtcaggcgagggcgctgtggactcggccaaacttacaggcgtgttagaacgcagtgga
ctcctggtcactgagcgagcgagggcggactttggcaccaaggacgttgagcaggatctg
aaccgtcttctgaagggagccagcgaggagcaacggaatgctgccaccctgggggagatg
gagaagacgactgccgtgggatcgctggctgcgttgataaaatatcttgagttacttgga
gatgagagtaacttcagacagtttcgtcttaaatcgtttgatctgacgcagtacatgaga
ctggattcctctgcagtgagagcgctgagtctcttgccatcaccacaggacggtggtaat
aagaatgcgtgtcttcttggactccttaataaatgcaaaacccctcaaggtcaaaggtta
cttgcccagtggatcaaacagccgttggtggacaaaaacaaaattgaggagcgtcttgac
atcgttgaggctttcgtgaacgacgtcgaactccgccagactttacaggaggagcagctg
aaacgaatccccgacctccagcgtctcgccaagaggatccaacgcaagaaggccacattg
gaggactgctatcgcatctttcaggtcgttgagttcatgcccgtcttactggagacacta
gagaggccaggcattgatttattgaaggaggttttcagtaatcccatcatggaattgttg
ctggactttgccaagtaccaacagatggtggagacgaccattgatttagaccaagtgaag
aatcacgagtttctcatcaaaccagattttgatgaagaactaacgaacttacgggagaag
atggatggtctagagaataacatccaggctcagctaggcaaggcagcgagggatctcggc
ctggaagccaacaagaccatcaaactagagtccaataaccagctgggatatttcttccgt
gtcacgaggaaggaagaaaaagttttacgaaacaacaagaagtatgccactatcgacacc
aacaaaaatggagtccgtttcacgcaatctacgatgcgtagtctgaacgaagaacacatg
tcagccaaggaagagtataatgaaatgcaaaaagccatcgttgccgagatcattggtatt
gcagctggttatgttgatcgcatgatgctgttgagtgatatcattgcacagttggacgta
cttgtaagctttgcacatgtatcctctaatgcccctatctcctacgtccgccctacactg
tcagagaagggacagggtggaatcaagctggtcgaggcaaggcacccatgtctggaagta
caggacgatgtcgccttcattccaaacggcgtgacttttgagagggaaaaacaaatgttt
tatatcatcactggaccgaatatgggcggaaaatctactttcataagacagatcggtgtt
gttgtcctgatggctcagcttggttgcttcgtcccgtgtcgatcggccgagatctccatc
gtagattccattctagctagagtaggagcaggagacagtcaacttaaaggtgtttccacc
ttcatgtctgagatgctggagaccgcatccattctccggtctgcatcagaaaactctctt
atcataattgacgagcttggaagagggacgtcaacgtatgatggcttcggactggcgtgg
gcaatctcagagcacatagcaaccaagatatcaggattctgtttatttgctacccatttt
cacgagctgactgcactagccgatgatgtccaaaccgttaacaatctacatgttacggcg
ctcactaccgatgggcagctcacactactctacagagtcaaacctggtgtttgtgaccag
agttttgggatccacgtcgctgagttggtccacttccccaagaaggtgatagactacgct
aagatgaaagcattagagctagaggactaccaaagcactggagcctcgggaggagggagc
atggaggggctagatgcaccagctgccaagaagaggaggctggaaaaacaggaaggagaa
atgatcattgacgatttcttgaagaaagtgaaacaactcgacacagaaacgatgtctgat
gagcatgtttatgaggcagtgcagcgattaaaagaagaagttgcaaagaagagtagtccg
tatgtacaggaagtgctgtccaggagtgacatttga
DBGET
integrated database retrieval system
