Asterias amurensis (Northern Pacific seastar): 139947271
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Entry
139947271 CDS
T10870
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH-like
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamu04121
]
139947271
Enzymes [BR:
aamu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139947271
Ubiquitin system [BR:
aamu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139947271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139947271
NCBI-ProteinID:
XP_071801260
LinkDB
All DBs
Position
14:complement(14381569..14406673)
Genome browser
AA seq
1878 aa
AA seq
DB search
MPKRKGKGPTQLNPAKRWLLTWNMNDENQGASTSCSVVPPVAEVDDVELTVESDLSPFSP
TSSSHTDGGLVESTVKETVCLAPPNHITKAEYNTLWERASYSITLNEQTPKETSMCQLGQ
ITLILKPHSPSKIRNPFPETLSGSPLRDQTLPKQFPRGRCSLFICTPKPHYLVFDYTMGN
AENVPTGYSPSVYMCLLAEIVNEPADVCLDSLQYICHQQTLKTKLKLLHHGYNSKTGHLS
LSVCIPHQGISSPAFAAEFVTRADVYSHHIQRIMHWFHGYPLPAPLLHDVTSKRHDFNKL
FDAIRLRHAINGDDSINLDVQLQSPCLVPTLREYQRQAVAWMLQKEGYGIQRREEEEREE
KVEGKLHCLWSKVRLGEETLYYNVHSGQFTRQRFTQKPSFPGGILADEMGLGKTVEVIAC
ILAHPRYPGSILDSNNDTAENPSSEFETVRSTSSEFSHQEEDNKESSLTPGSGVSNSKQT
LEVSAGVASLEVPLGEALEVPPREALFEVPPGKESLEVTPGEALLEVPPGEALPGRESIE
AKISEVDSEPLIGSNDTIIDTDQLSCTTGIVDSNSETGKIPSSKSELNTVASTSHSNCHQ
GVSKANLPQLTESGIKTDQVLENPTSEASSQGKSLEVDHIQYHNNINMDTEPQLPSNSGI
NDSKTICAAQTSTSCDLEPPGKELHQTVPENTSEVKTEKMVVENSHPSTSCELLIPCKPT
KLDSVDSGFEIGLKSKASRHPPQESKELIKAELTGQETVSFISNERKDKMCNGTDGALTT
SANQDQTGNVNKCTDSTDLREVSRSGRESLLRTSKQCPSTSETAKEGKGLEKGCELKVKQ
RKKRSKKLPVSIPRRKSQEESTFKFHCICGVYEEELDRELFYECRQCNGWQHKKCVDYRG
VPESDCSLCPMCCVDQPAVSSGATLIVSPKPICHQWIDEINRHVRAHTLKVLVYDGVKKQ
GFLHPRSLAQHDIVITTYDTLRSELNYVGLLQTNSQKGRRLRYAKRYMAVPSPLPAVEWW
RVCLDEAQMVECPTAKTAEMALQLTAVNRWCVTGTPVQRDLSNLYGLILFLGMEPYWVKC
WWDNILYKPYLHGNQEPMEEALAKVLWRSAKKDVINQINIPAQTEETHWLNFSPIETHFY
KRKHEDCSNNFLQVTGRLTFDVQTKLSTLDRATVQKLMNPLLRLRQACCHPQAVRGEFVS
MQRNRLTMAELLQSLTLKAKVESEEAHRQLVCALNGLAAVCVIKGETLDAIQHYRDVLLS
AEEHKDRLKTDSLQRLHAMHNLHQLLKLKPEGLIPTLRDGELGKQVQEIRDAYLAKAEAA
VQSSLTSLLPLQEKITDLKDQLSSAGPWWVEGLQYIQYLGFDEEFIDKVKNALQSTTRND
TLSVVNHFSTIRGLQMVLVTKMDDLTAAYQRLQSGMMRLNVEVNQELVSEATDCHLRPFG
GKPKNRCPFCRVHTLFTEYETCLFSIKQRDNMADPDPEDDDSNVTGPKLLGSWAASETER
ILRSLLAFLKHHNADEDILQEGNNYVEMVDTQKKEFKSLRVTWTMLSERVAAWDELKMAT
MRLRLREAHEPDDVTSQPNVIEPNQLDQQRYKLLNDRVLAQSELKKKLGQLVYLRSLSSA
QSDLPGGINPEPCPICVRELGKQWSVLPCGHSFCNNCMEMMRVHNSSRRKTIRCAICRSV
SSTLEISFVSTDQTNEEEDCSINVRGGYSTKVEAVVRILLQLRNQDLHVKALIFSTWIDV
LTVIAKSLKDNDIEYRSIGLFGDRHFKENLMDFKQEECVTALLMPVHSGSKGLNIIEATH
VLLVEPILNPASELQAVGRVHRIGQTRPTVVHRFLVRDTIEERLHAFLQAKHTSASLDNL
EGETGALTLDTLKQLFTY
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagaaaaggaaaaggtcccacacagctcaaccctgctaaacgatggctcctg
acgtggaacatgaatgatgagaaccagggagcttcaactagctgcagtgtcgtcccacct
gttgctgaagtagatgatgtggagttgaccgtggaatcagatctatctccgttcagtcca
acatcctcgtcacacaccgatgggggactggtggaatccacagttaaggaaactgtttgc
ctggcacctcccaatcatatcacaaaggctgaatacaataccctgtgggaacgagctagc
tatagcatcactcttaacgaacagacccccaaggagacctccatgtgccaactcgggcaa
atcaccctgatcctcaagccacacagcccgtccaagattcgcaaccccttcccggagacc
ctttcgggaagcccactccgagatcagactttaccaaaacaattcccaagagggcgctgt
tccctgtttatctgcacaccaaaaccgcattacctggtgtttgattacacgatgggcaac
gcagagaacgtgccaacggggtactccccgtctgtgtacatgtgccttctagctgagatt
gttaatgagccagcagatgtatgcttggactccctgcagtacatctgccatcaacagaca
ttaaaaactaagctgaaactccttcaccacggttacaattccaagacgggtcatctgtcg
ctgtccgtctgcattcctcatcaaggaatatcctctccagcgtttgcagcagaatttgtc
actagagcagatgtctattcccatcatatacagaggatcatgcactggttccatggctac
ccactcccagcaccactgctccacgatgttacttccaaacggcatgatttcaacaaactc
tttgacgcaatacgccttcggcatgctataaatggagacgactctattaacctggacgtc
caattgcagagtccgtgcctcgtgccgaccctccgagagtaccagcgtcaggcagtggcc
tggatgctgcagaaggagggctatgggattcagagacgggaggaagaggagagggaggag
aaggtagaagggaagctgcattgcctctggtcaaaggtcagactgggtgaggagacattg
tattacaatgtacacagtggacaattcaccaggcagcgtttcactcagaagccatcattt
cctggtggaatcctagcagatgagatgggtttgggcaagacagtagaggtcattgcctgc
attcttgcccatcctaggtaccccggtagcatcttggattccaacaacgacactgccgag
aatccttcatctgagtttgaaactgtcaggagtacaagttctgagttctcccatcaagaa
gaagacaataaagagtcttctttaacaccaggatcaggagtcagtaattcaaaacagaca
ttggaagtatctgctggagtagcatcgttggaagtccctcttggggaagcgttggaagta
ccacctagggaagcattgtttgaagtacctcctgggaaagaatctttggaagtaactcct
ggagaagcattgttggaagtacctcccggagaagcacttcctgggcgagaatcgattgaa
gcaaagatttctgaagtggactcggagccacttattggaagtaatgacactatcatcgac
acagaccaactcagctgtaccactggcattgtagattctaacagcgaaactggtaagatt
ccttcttctaaatctgagttaaatactgttgcaagtacaagccactcaaactgtcatcaa
ggtgtctctaaggcaaacctccctcagcttactgaatcaggaattaagactgatcaagta
ttggaaaacccaacttcagaggcatcatcacaaggcaagtctttagaagtagaccacata
cagtatcacaataacataaacatggacacagagcctcaactgccatctaactcaggaatc
aatgattcaaaaactatttgtgcggctcagacttccacaagctgcgatctagaaccacca
ggaaaagaacttcatcaaactgttccagagaatacttccgaagttaaaaccgagaaaatg
gtcgttgaaaactcccacccatctacctcatgtgaacttctcatcccatgcaaacctaca
aagctagattcagttgactctggatttgaaattggtctaaagagtaaagcgtctagacac
cctcctcaggaaagcaaggaactgatcaaagctgaattaacagggcaagaaaccgtttct
tttatatccaacgagcggaaggataaaatgtgcaatggtacagacggggctttaactact
tctgcaaaccaggatcaaacgggtaatgtaaataaatgtacagattcaacagatctcagg
gaggtatcaagatctggacgagaatctcttctccggacctcaaaacaatgtccaagtaca
tcagaaactgccaaagaggggaaaggactagagaagggttgtgaactcaaagtcaaacag
agaaagaagcggagcaaaaagctccctgtcagtatacccaggcggaagagccaggaagaa
tctacctttaagttccattgtatctgcggtgtttacgaagaagagctggaccgagagcta
ttctatgagtgcaggcagtgcaatggatggcagcataaaaaatgtgtcgattacagagga
gtaccagagagtgattgcagtctgtgcccaatgtgctgtgtggatcagcctgcagtgtca
tctggagccaccctgatagtctcccccaaaccaatctgccaccaatggattgatgagatc
aatagacatgttcgtgcacacacacttaaagttcttgtctatgatggtgtgaaaaagcaa
ggttttctgcaccctcgttctcttgcccaacatgacattgtcatcacaacttatgacacg
ctgagatcagaactcaactatgtaggtctacttcaaacaaacagtcagaaaggacgacgc
ttaagatacgccaaacgctacatggcagtccctagccccctccctgcagtggaatggtgg
agagtttgcttggatgaggctcaaatggtagagtgccccacagctaagacggctgagatg
gctctgcagctaactgctgtgaaccggtggtgtgtcactggtactcctgtgcagcgagac
ttgtccaatttgtatggattaatcctcttccttggcatggagccatattgggtcaaatgc
tggtgggacaacatcctgtacaagccctatctccatggcaaccaggaaccaatggaagag
gctctggcaaaagtgctttggcgcagtgccaagaaagacgttatcaatcagatcaatatt
ccagcccaaacagaggaaacccattggctgaatttctcaccgatcgagacccacttctac
aaacgcaaacacgaagactgctccaataatttcctccaggtcaccgggcgtctgacgttt
gacgttcaaaccaaactcagcacccttgatagagctacagttcaaaagttgatgaacccc
ttgctgaggctccgccaggcctgctgccatccccaggccgtccgcggggagtttgtcagc
atgcagcgtaacaggctgaccatggctgagctgctccaatcactgactctcaaagccaag
gtggagtctgaagaagcgcacaggcagctggtgtgcgccctcaatggtctggctgcagtt
tgcgtcatcaaaggagagacacttgatgcaatacagcattatcgagatgttctgctgtct
gctgaggagcacaaagacagattgaagacggattctctacagagactgcacgccatgcat
aatctacaccaactgctcaaactcaaaccggaaggtttaatccctacgctgagagacggg
gaactaggcaagcaggtgcaggagattcgagatgcttatcttgctaaggcagaggcagcc
gtgcagtccagcttgaccagtctactcccactccaagagaagattactgacctcaaagac
cagctatcttctgctggcccttggtgggtggaaggtctgcaatacatacagtatttggga
tttgatgaagagttcattgacaaggtcaagaacgccttgcagtctacaacaaggaacgat
accctgagcgttgtcaaccatttttccaccatccgaggcctgcagatggttttagtcacc
aagatggatgatctgaccgctgcgtaccaacgtcttcaatctggcatgatgagactcaat
gttgaggtcaatcaggaactggtatccgaggcaacagattgccatctgagaccattcgga
gggaaaccaaagaacaggtgtccattctgtagagtgcatacgttgttcacagagtatgaa
acatgtttgttttccatcaagcaaagggacaacatggcggatccggatccagaggatgat
gatagcaatgtaacaggacctaaactcctaggttcctgggctgctagcgagacagagaga
atccttcgatctctcctagccttcctgaagcatcacaatgctgatgaagatatcctgcag
gaaggcaacaattatgtggagatggtggacacacagaagaaagagtttaagagtttgcga
gtcacctggaccatgctgtctgagcgagttgcagcttgggatgagttaaagatggccacc
atgcgtctacgcctgagagaagctcatgagccagacgatgtcacctctcagccaaacgtc
atcgaaccaaatcaattggatcagcagcgatataagctccttaacgacagggtcctggca
cagagtgagttaaagaagaagcttggtcagttggtctacctgagaagcctctctagtgcg
cagagtgacctaccaggtggcatcaatccggaaccttgcccgatctgtgtgcgggaactc
ggaaagcagtggtctgttctgccatgcggccactctttctgcaataactgcatggagatg
atgcgcgttcataacagttcaagacgtaagaccatccgttgtgcaatctgtcggtcggtc
tcatccaccttagaaatatcatttgtcagcactgaccagaccaatgaggaggaggactgt
tccattaatgtgaggggaggctattcaactaaagtagaagccgtggttcgaatccttcta
cagctcaggaaccaggacctacacgtcaaggccctcattttttcaacttggattgacgtt
ttgactgtcatcgccaagtcgttgaaggataatgatatagagtaccgtagcatcggactg
tttggagaccgccatttcaaggaaaacttgatggatttcaagcaagaggaatgtgtgacg
gcactcctgatgcccgtacacagcggaagcaagggtctgaatatcattgaggctactcat
gtactactcgttgagcctatcctcaatccagccagtgagttacaagctgtcgggagagtt
catcgtatcggccaaacgaggccaactgtagttcatcgctttctagtaagagacactata
gaggaacggttacatgcgtttctacaagctaagcacacaagtgccagcctagacaacctg
gaaggagagactggtgcgctaactctggatactctcaagcaactcttcacatattga
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integrated database retrieval system
