Asterias amurensis (Northern Pacific seastar): 139947273
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Entry
139947273 CDS
T10870
Name
(RefSeq) WD repeat-containing protein 3-like
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139947273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamu03009
]
139947273
Ribosome biogenesis [BR:
aamu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
139947273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Utp12
NBCH_WD40
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_SCAP
ASA1
PEP5_VPS11_N
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_WDR19_1st
WDR54
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_Vps41
PAC11
Beta-prop_EIPR1
Beta-prop_NWD2_C
RMC1_N
KNTC1_N
TRM82_WD
Beta-prop_RIG_1st
Beta-prop_WDR19_2nd
Utp21
PROPPIN
Motif
Other DBs
NCBI-GeneID:
139947273
NCBI-ProteinID:
XP_071801262
LinkDB
All DBs
Position
14:12772332..12791875
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AA seq
944 aa
AA seq
DB search
MGLTKQYLRYASSATFGIVGTQKANVLFVELRGIKGKYVAAAACEHVFIWDLRKSEKMMV
LHGDKSSEVSILAKSPQGQTLAVGYADGTVKLFSLVTGEMTVTFSGHKSAVTALGFDKDG
LRLASGSKDTDVIVWDVVNESGLYRLKGHKGVVTQCHFMQKHNILITSSKDTFVKFWDID
TQHCFKTLIGHRTEVWDFVIIGDDHRLVTGAGDSELRVWDIAFQDETEDGAEVPAKKPRL
STIIGDDEEEDIEDDDDTSILTCHCVGSIMRKGSQRVVSLSTDCTGRVLSCHGADRRLEV
FLVLTEDERTKLLNKKQRKARKKIREKETQGEEEEEKILESLAVKDEIQTCCILEASSKI
RSFATLLENDGASVKMVLQLYNNSLETHVIQSMEGKRWAGEKQGAVTLPGHRSDVRTVTF
SADNTTVLTGSGESIKVWNRATQQCIRSMKSGYALCSAFVTGERHCLIGTKTGHLELFDI
AAGVMLENVEAHEGALWAIAVAPDKRGFVTGSADKTLKFWDFELIPDPDSKESGKRLTVV
HKRTLQMSDDVLCVKYSPDQRLLAVALLDSTVKVFFADTLKFFLALYGHKLPVLTMDISS
DSTLIVTGSADRNIKIWGLDFGDCHRSMFAHDDSIMSLQFVPKTHLFFSAGKDKKIKQWD
ADHFELITTLEGHHAEVWCLAVSSNGNFLVSGSHDKSLRLWERTQEPLVLEEEREMEREK
AAEDAIAHEEQQVLPGQVASNEVGTAGRKTVETVKAAERIMEALELYKEETAKEKEHRET
QQAHKKGLIPPMKIHPILQAFGNISPTRYVLDVIRKVKSSELEEALLVIPFSYVLDLLPL
LETFINSGWQVELSCRCLLFLLRVHHGQITSSQVLLPIIDKVRSSSMRQVHHLRDQIGFN
LAGLQFLHREVESRSDVQLFGDASIKMKEKKKKKRKLMLTMATS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggggttaacgaagcaatacctgcgctatgcatccagcgctacctttggcatagtaggc
actcagaaagctaatgtgttatttgtcgagctccgtggcatcaaggggaagtatgttgct
gctgcagcttgtgagcatgtcttcatttgggatctacgtaaatctgaaaagatgatggtt
ctccatggagacaagtcctcagaagtgtcaatcctggccaagagtcctcaaggccagacc
ttggctgtcggctatgctgacggaacggtcaagctcttcagccttgtcaccggtgaaatg
accgtcaccttcagcggacacaaatcggccgtaacagctctaggttttgataaggatgga
ttgagactagcatctggttccaaagacacggatgtcattgtgtgggatgtggtgaatgag
agtggtctgtatcgactcaaaggccacaaaggtgtcgtcactcagtgtcacttcatgcag
aaacacaacatcctcattacaagctctaaggacacatttgtcaaattctgggatatcgac
actcagcactgcttcaagacccttattggacacaggacagaagtgtgggattttgtgata
attggagatgaccatcgactggtgacaggtgcaggagacagtgagctgagagtctgggac
atcgcatttcaagatgagactgaagatggggctgaggtaccggccaagaagcctagactg
tcaaccattattggtgatgatgaggaggaagacatcgaagacgatgatgacacgagtata
cttacttgccattgtgtaggatccatcatgcgtaaagggagtcaacgagtggtgtctctc
tccactgactgcacaggaagggtgctatcttgtcacggggcagatcgtaggttagaggtt
ttccttgtacttactgaggatgagcgtacaaagctgctcaacaaaaagcaaaggaaagct
agaaagaaaatcagggagaaggaaactcaaggtgaagaagaagaagagaagattcttgaa
tctttagctgtcaaagatgaaatccaaacttgctgcatcttggaggcttctagtaaaata
aggtcatttgctaccctcttggagaacgacggagcatcagtgaagatggtactgcagctg
tacaataactccctagagacccacgtcattcagtccatggagggaaagcgctgggccggg
gagaagcaaggtgccgtcaccctaccgggtcataggtcagatgtcaggacagtgaccttc
agtgcggataataccactgtgctgactggctctggagagtccatcaaagtttggaacagg
gccacccagcagtgtattcgctccatgaagtctggttatgctttgtgctctgcgtttgtg
accggggaacgacactgcctgatcggcaccaagacgggccatctggaacttttcgatatc
gcagctggggtcatgcttgagaatgttgaagcacacgagggcgctctttgggccattgct
gtagctcctgataagagagggttcgtgaccggcagcgccgataaaaccctgaaattctgg
gattttgagctcattcccgaccctgactccaaagagtctggaaaacgtcttaccgtggtg
cacaagcgtactctgcagatgtctgatgacgtcctatgtgtgaaatactcacctgatcag
aggcttcttgctgtagcactgctggactcaacagtcaaagtcttctttgctgatactctt
aagtttttcctggccttgtatggacacaagctgcctgttttaaccatggacatctcatca
gacagtaccctcattgtgaccggatcggcggatcgtaacatcaagatctggggtcttgac
tttggtgactgtcaccggtcgatgtttgcccacgatgacagcatcatgagccttcagttt
gtccctaagacgcatctcttcttcagcgctggtaaagacaagaagatcaagcagtgggat
gcggatcactttgagctgatcacaacgttagagggccatcatgctgaagtttggtgcctt
gcagttagctcaaacggcaattttctggtgtccgggtctcatgataagtcactgcgtctc
tgggagaggactcaagaacctctagttcttgaggaggagagggagatggagagagagaag
gctgctgaggacgccatcgctcatgaagagcaacaagtgcttccaggtcaggttgcatcc
aatgaggtaggcacagccgggaggaagacggttgaaacagttaaagcagcagagagaatc
atggaagctcttgagctgtacaaggaagagacggccaaggaaaaagagcacagagagact
caacaggctcataagaaaggattgatccctcccatgaagatacatcccattcttcaggcg
ttcggaaacatatcgcccacaagatatgtccttgatgtcatcaggaaagtcaaatcaagt
gagttagaggaggcgttattggtcatccccttcagctatgtactagaccttctacctcta
cttgagaccttcattaactcggggtggcaggtggagctgtcttgcaggtgtctcctcttc
ctactcagagtgcatcatggtcagatcacatctagtcaagtattgttaccaattattgat
aaagtacgcagcagctccatgagacaagtacatcatctcagggaccaaataggtttcaat
ctcgccggtctgcaattcctccatcgtgaagtggagtcgagaagtgacgtccagcttttt
ggagatgccagtatcaagatgaaagagaaaaagaagaagaaacggaagctgatgctcacc
atggcaaccagctaa
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