Asterias amurensis (Northern Pacific seastar): 139947613
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Entry
139947613 CDS
T10870
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04120
Ubiquitin mediated proteolysis
aamu04137
Mitophagy - animal
aamu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139947613
04120 Ubiquitin mediated proteolysis
139947613
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139947613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139947613
04121 Ubiquitin system [BR:
aamu04121
]
139947613
03029 Mitochondrial biogenesis [BR:
aamu03029
]
139947613
Enzymes [BR:
aamu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
139947613
Membrane trafficking [BR:
aamu04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
139947613
Aggrephagy
Other aggrephagy associated proteins
139947613
Xenophagy
Other xenophagy associated proteins
139947613
Ubiquitin system [BR:
aamu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
139947613
Mitochondrial biogenesis [BR:
aamu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
139947613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR_1
IBR
ubiquitin
Motif
Other DBs
NCBI-GeneID:
139947613
NCBI-ProteinID:
XP_071801668
LinkDB
All DBs
Position
14:complement(19223860..19232264)
Genome browser
AA seq
507 aa
AA seq
DB search
MFEVLVKFEGESLTVLVDASWTVDRLKREFTRCLAAVPAAAAVSVVGDSAASTASATTGN
MTSATAGVRALDHSEVQVIFCGKNLSDGMKLQDCELQETSTLFVTRRRGFTLEPNCSQER
YARIPTQGAALDETYTSLQTHLDLEPHIKPLGGANYATDGGQLATAQQSGDATRTTPKLY
VYCKTPCQSVQPGKLRVCCSTCKEGIFIVQQDPTCWDDVLKPYRIFGRCQTEGCSGTIAE
FYFKCGSHPTADNDRAAALHLIKSNTRDVVCLTCGDIRDPVLVFPCAGGHTICLDCFASY
CQVRLDDRQFVLADEEFGYTLPCPVGCPASLIKENHHFRVLGSEQYARYQRFGAEECLLQ
NDGVLCPSPGCGAGLLPDFGSRRVECVQQAGQGCGFVFCRQCRNAYHSGDCETSATQTVI
DGGGGAYAVSSERAAQALWEHDQSKETIRQSTKQCPNCKAPTEKNGGCMHMICPIQQCKF
EWCWVCSIEWNHQCMADHWFDVNRPLV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagttttagtgaaatttgagggggagagtttgactgtattggttgatgcgtcg
tggacggtagatcgactgaaaagagagtttacccgctgcctggcggcagtgccagcagca
gcagcagtgtcagtggtgggggattctgctgcgtccactgccagtgccaccacgggtaat
atgaccagtgccactgctggtgttagagctcttgaccattctgaggtccaggtcattttt
tgtggtaaaaatctgtctgatgggatgaaattacaggattgtgagctgcaggagacaagt
actttgtttgtaacaaggaggagaggttttacactagaaccaaactgcagccaagaacga
tatgctaggataccgacccagggagcagcgttagatgagacgtatacctctctgcaaact
catcttgatttggaaccacatattaagccactagggggtgcgaattatgccacagatggt
ggccagcttgctacggcacaacaatcgggtgatgccactaggacgacgcctaagctctat
gtttattgcaagactccttgtcaatctgtacagccaggaaagctacgtgtgtgctgcagt
acatgtaaggaaggtatctttatagttcaacaggatccaacgtgctgggatgatgtattg
aagccctataggatctttggaagatgccaaactgagggatgttctggaacaatagctgaa
ttttacttcaagtgtggcagtcacccgactgcagataatgacagagctgctgctttacat
ctgatcaagtccaacacaagagacgtagtttgtctaacatgtggagatatccgtgatccg
gtactagtcttcccatgtgctggtggacataccatctgtctggattgctttgcttcatat
tgccaggtgcgacttgatgacaggcagtttgtcttggctgatgaggaatttggctataca
ctgccatgcccagttggctgtccagcatcactgattaaagaaaaccatcacttcagagtg
ctcggaagtgaacagtatgctaggtaccaacggtttggggctgaggagtgtctgcttcag
aatgatggtgtgctgtgtccttcaccaggttgtggggctggactgctaccagactttgga
tcgaggagggtggaatgtgtacaacaagctgggcaaggatgtgggtttgtcttttgtcgc
caatgtcgaaatgcataccacagcggtgactgtgagacatcagcaacacaaactgtgata
gatggaggtgggggagcatatgcagtcagcagtgagagggctgcccaggcattatgggag
catgaccaaagtaaagagacaatcagacaatcaacaaagcaatgtccaaactgtaaggca
ccaacagagaaaaatggaggctgtatgcacatgatatgcccaattcagcagtgcaagttt
gaatggtgctgggtatgcagtattgaatggaaccaccagtgcatggctgatcattggttt
gatgttaaccgaccattggtttga
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