Asterias amurensis (Northern Pacific seastar): 139947883
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Entry
139947883 CDS
T10870
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139947883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139947883
03016 Transfer RNA biogenesis [BR:
aamu03016
]
139947883
Enzymes [BR:
aamu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
139947883
Messenger RNA biogenesis [BR:
aamu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
139947883
Transfer RNA biogenesis [BR:
aamu03016
]
Prokaryotic type
tRNA degradation factors
139947883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
Mig-14
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
139947883
NCBI-ProteinID:
XP_071801862
LinkDB
All DBs
Position
1:complement(21519484..21533634)
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AA seq
774 aa
AA seq
DB search
MAASMTKIMLAQNAFVLPINRLFWRCENCYRKCTVRRWKHMKPISSVDDTDSVEAIVGNK
TLHLSTGKLARLTDGCAVAQLGDTSVLVTAVGRKKPTATNFLPLTVDYRQKAAAAGRIPT
NHLRREMGNSNLEILTSRMIDRSIRPLFPKGYFYETQIVCNLLAVDGAHDSDVVCINAAS
TALALSDIPWNGPVGAVRVGLVNDDVIINPTRLQLSKSRLNLVLAGARKSSIVMLEASAD
NILQNDFVKAIRAGLKETQVIIQQIEKLAKRSGKDKRVPEKLFVPSEEVVEAVSRLTRDR
YYEVYTDVTHDKFSRDQASSAVRDEFIEQIQELFPSEESFFINEAFNTVAKEVFRSLILE
QDRRCDGRDLKQLRDIRCEVNLFKPLHGSALFQRGQTQCLCTVTFDSIESALRTDPIMEM
AGGVKDKNFMLHYEFPPYATNETGRLMAGRRELGHGNLAEKSLKPVIPSDFPFTIRLTSE
VLESNGSSSMASACGGSLALMDAGVPISNAVAGVAIGLMTATEPGDSHNITDYRLLTDLL
GIEDYMGDMDFKMSGTKKGITALQTDLKLPVSMKIIHEAIQHATAGKSEILNIMATALAK
PRDGHKDNSPVTENLEVPIPRRSKFVGPGGYNLKKIRAETGVTISQLDENHFSIFAPTPN
AMEEAKEIIEELLEEDREPDLAFGAIYVATIMEVREAGVMVKLYPTMQPTLLHNSQLDQR
KVNHPSALGFEVGQEISVKYFGRDPVSGKMRLSRKALMAPASALIKNLTGNKTT
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccatgaccaaaatcatgcttgctcaaaatgctttcgttttaccgatcaat
agactattttggagatgtgaaaactgttatcgaaagtgtacagttaggagatggaagcat
atgaaaccaatttctagtgtagatgatacagattctgttgaagccattgttggaaacaaa
acacttcatttatcaactggaaagttagcaagattaacagatggatgtgcagttgctcag
ttgggtgatacatcagttcttgtgacagctgttggaaggaagaagcctacagcaacaaac
ttccttccattaacagttgattacagacaaaaggctgcagctgctggtagaattccaacc
aatcacctaagacgagagatgggaaacagtaacctggagattcttacaagcagaatgatt
gataggtcaatcaggccgctgtttccgaagggttatttctacgaaacgcagattgtatgt
aatcttcttgctgtggacggagctcatgattctgatgtggtctgtataaatgctgcctcc
acagccctagccctgtctgacatcccatggaatggtccagtgggtgcagttagggttggc
ctcgtaaacgatgacgtcatcattaatcccacaaggttgcagctgagtaagagtcgtctt
aacttggtgcttgctggtgcaagaaagagcagcatagtcatgctggaagcttcagcagac
aacatcttacagaatgactttgtgaaggccatccgagctggcttaaaggaaacccaggtc
ataattcagcagatagagaaactagccaagaggtctggcaaggacaagagagttcctgag
aaactctttgtgccctcagaggaagtggtcgaggctgtcagtagattaacaagagataga
tattatgaagtttatacagatgtaacacacgataagttttccagggatcaggcttcttca
gctgtccgagatgaatttattgaacaaatacaagaattatttccatctgaagagtcattt
tttatcaatgaagcattcaacactgttgccaaagaagtattcaggagtctcatactagag
caagacagaaggtgtgacggacgagatttaaagcagctgagagatattagatgtgaagtc
aatctatttaaacctcttcatgggtcagcgctgtttcaaagaggtcaaacgcagtgcctt
tgtacagtgacgtttgactctattgaatctgctcttagaacagatccaatcatggagatg
gcaggtggagtgaaagacaagaatttcatgttacattatgagtttccgccatatgcaacc
aatgagactggaagattgatggctggaaggagggaacttgggcatggtaacctggcagag
aagtctctgaaaccggtgatacccagtgactttccattcacaatacggctcaccagtgaa
gttttggaatcaaatgggtcttcatctatggcctcagcatgtggaggcagcttagctcta
atggatgcaggggtaccaattagcaatgcagtagctggagtagccattggtttaatgact
gcaactgaacctggtgattcacataacatcactgactacaggttattgacagacctcctg
ggtatcgaggactacatgggtgacatggacttcaaaatgtcaggtactaagaaaggaata
acagcactacagactgatctgaagttgccagtttcaatgaagatcatacatgaagctatt
cagcacgcaacggcaggcaagagtgagattttgaacattatggcaactgccttggccaaa
ccacgagatggacacaaggacaatagcccagtcacagaaaaccttgaagtacccatcccg
agaaggtcaaagtttgttggaccagggggatacaacctgaagaaaatacgggcagaaacg
ggggtaacaatctcccagttggatgagaatcatttctccatctttgcaccaacgccaaac
gccatggaagaggctaaagaaatcattgaagagttgttggaagaggacagggagccagac
cttgcatttggagctatatatgtggcaacaatcatggaagttagagaggctggtgtgatg
gtcaaactgtatcccacaatgcaacctacactgctgcataactcacaactcgaccaacgg
aaggtcaaccacccaagtgcgttgggctttgaagtcggccaggagatctccgtcaaatat
tttggtcgagaccccgtcagtggcaagatgaggttatcaaggaaggctctaatggcccct
gcctcggctctcatcaagaatcttactggcaataaaactacatga
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