Asterias amurensis (Northern Pacific seastar): 139947980
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Entry
139947980 CDS
T10870
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139947980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamu03000
]
139947980
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aamu03310
]
139947980
Transcription factors [BR:
aamu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
139947980
Nuclear receptors [BR:
aamu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
139947980
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
tRNA_bind_3
vMSA
Motif
Other DBs
NCBI-GeneID:
139947980
NCBI-ProteinID:
XP_071802018
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Position
15:15677292..15719855
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AA seq
451 aa
AA seq
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MDNMSNIDSINSITSIQSPTSTMGSPPPMSNNRNMGSPPLITSPSLVHGGMMHPQAMQSP
TLSSMGSVSSVSSQEDIKPMIGPSGIPTHPMSQSMMSHMSLSPSSLLNQGAHSPLGMPGS
SMNKGICAVCGDRASGKHYGVYSCEGCKGFFKRTVRKELSYSCRDDRNCIVDKRQRNRCQ
YCRYQKCIAMGMRREAVCLAAVQEERQRKEKCQGEGEVESTSTVNNDMPVEKVLEAELAV
EPNTDTYVDTPHDPVTNICQAADKQLFTLVEWAKRIPHFTELPLDDQVTLLRAGWNELLI
AAFSHRSIAVKDGILLATGLHVHRNSAHHAGVGTIFDRVLTELVAKMREMKMDKTELGCL
RAIVLFNPDAKNLNSVQKVEELREKVYASLEEYCRMQYPDEPGRFAKLLLRLPALRSIGL
KCLEHLFFFKLIGDTPIDTFLMEMLEAPSNS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatgtccaatattgattcgataaactccatcacgtccatccagtcgcccacc
agtacgatgggctcacccccgccgatgtcgaacaatcgcaacatgggttcccctccactc
ataacgtccccgtcgctcgtacacggcggcatgatgcacccacaagccatgcagtcgccg
accctcagcagtatgggatcggtgtcatcggtctcgtcacaggaggacatcaagcccatg
atcgggccctccggtatcccaacccaccccatgtcacagtccatgatgtcacatatgtca
ttgtcaccgtcgtcactgctcaaccaaggggcgcattcgccgctgggcatgcccgggtcg
tcaatgaataaaggaatttgtgctgtgtgcggagacagagcatccggtaagcactatgga
gtctacagctgtgaggggtgtaaagggttcttcaagaggaccgtcaggaaagaactgtcc
tactcctgtcgagatgaccgcaattgtattgtagacaaacgccagagaaatcgctgccag
tactgccgctaccagaaatgcattgccatgggcatgaggagagaagctgtgtgtcttgca
gctgtacaagaggagagacagaggaaagagaagtgccagggggagggggaagtggagagt
acgagcacggtcaacaacgacatgccggtggagaaggtgctggaagcggagcttgctgtg
gaacccaacactgatacatacgtcgatacaccgcatgatccagtaaccaacatatgccag
gcagcagacaaacagctcttcacattggtagaatgggccaagagaattccacactttact
gaactacctcttgatgatcaggtcacccttctaagagcaggctggaatgaattgctgatt
gctgcattctcacatcgctccatcgctgtcaaggatggtatcctcttggcaaccggtctc
catgtacatcggaacagcgcccaccatgcgggggtcggaaccatttttgacagagtcttg
acggaactcgttgcgaagatgagagagatgaaaatggacaagacagagcttggctgcctg
agagccatcgttctctttaacccagatgccaagaacctgaactcagtgcagaaagtggag
gagctacgcgagaaagtgtacgcctccctcgaggagtattgtcgcatgcagtacccggac
gaacccggtcgctttgcgaaactcctccttcgtctaccggctcttcgctccatcggactc
aaatgcctggaacatctcttcttctttaagctgatcggcgacacgcccattgacacattt
ctcatggagatgttagaggcgcctagcaacagctga
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