Asterias amurensis (Northern Pacific seastar): 139948189
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Entry
139948189 CDS
T10870
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NUP188-like
KO
K14311
nuclear pore complex protein Nup188
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139948189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139948189
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139948189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
139948189
NCBI-ProteinID:
XP_071802352
LinkDB
All DBs
Position
15:16726504..16750089
Genome browser
AA seq
1844 aa
AA seq
DB search
MAPGTTHVWRCNHEVLQTITGRSAITARTLIAEELTNHKPLLLDGLLFYKPHSEEAEKKL
TADKNVGRLERRFLLQLSQFLDLDAVQCKELFEAYILSAFRGTGAQLQSILKDERSVQAL
LQKVWEYYHTERMMLLHCIKHLFSFHTDVDHPYQEQYLGCVSKLEEKKVYERLLKQYETS
FNXPVPTRHKRGPLMSERHSIRWCLQGLREQCELLEIILLYVRDQDDPTQYLLPLAQLFQ
KQGFGTRQPYRYLLDAEDLAHHLTARIGFLCGMLLIECMNLYMLMTMPEKGSVPVHTLTS
NKKLTGELTLIFQSLGGQPAHGPVLLAWLVLNGTLWPDRDMALVRKLGQQAVHLQVFRYM
AAQLDGLPSQQNSVISLLCHVVVYTLLTIVLTLFCEDTLGGRQDLIELACQLLRQPQLCQ
EFWESDIDGGIFSLLQSSTNSFPLDFNPLLKLLTPLASEGSRQVLMYVDRLPTFTEPLDN
NRSGDLRSTNQRGVFELVRDKVVLPAGDHCAGFIIQAGTLGCQVQQERGELIRWDSDFSG
WELFHCLIDWLLVRIRQGNIPSAVQVGQAEAIINLVTQILEADWSLASKLQPITNCLYPL
ISSLCTLTQPPLSLLAACIKCITVMAAHQPKQVWQRIQKIGFLPHTGNVYSDVSVAISGE
GIYPAEYGKLLTGQEQPTGEYPVTLEFLRLVMTLLKGLCTSEVNTATSQDLLACVVFIQR
EVFAAFHNWRYARFDDREKVGQCSLDIFHVALHVLPVIGKQSSTIIKAESSRPGKDVSKS
AVSVRETCLHGFLFTSAGEALLYIVASGIDTLEQRIIDQGSNFDGPAERLSQLIKLSLSI
LNRLLLLKPRDLPPCPLEQALTSHTTGLPHQPHLIGLIAGYIYHRHDPRLPTLATLLLKR
VAMVAPMSIFGCLGSQAAAIRDIYLSRLQAHSEDERLKVGILELLTVAVETQPGLSELFL
NLQKVKLGQAEEGKVGSSSALPSSTPKFEIGEVSCLHAVLDAIEEVKQGTTHCPPDLHCA
ALGFLQALWEDCRESALSVLRARPKFWVDVTAPLFKDLPPIEGSTQSMSTNIKICAYAFK
ILTLECYHVSSENLEEGLKVILKKLKQEGRYTYWSGCIRGLLESEAGHLTDLEEYLIREH
ELLVLVQAWRTLLLVTTSTNGKAIEMSDVKVQSAILSDIAACIDSQSCLFDSVLNQKACS
LLSNLYMSLLTHWSRTQTSQWKHVNTLVTVLKRITDSDSPGLSHAATSIMAALTTLLKHR
TSKQALQVETMESLLGITSLALQQSSMFYLNPPKNANHAGLVRDSDEGAVQGSGAASDAS
HNGQERLMGTRGTANGMDREKDFTGAQHASKYSMPTVAAYLLDELLVGEKSRTEVWLPLV
RQHGILSLLLTTLQSCIQIKRGIHYTEAVLLLLLDLASIPEAAESIMVRGLVQQVCLPLL
QLHQQNGEAGLTWNNSSKTEQTDLLTWPSIYRQAVSVMTVMLGTLKHTFLQDALDFFGVH
RERMMKCLDAVQYNQSRPCLMEVETTSAFIYRLSLFAKDLGCHMKTWELQALLFALTSLT
HCCVALLIRPRLLQYLSEKSSKNSELGKQQPTALTMRVTPLRLRQQVTATDLTDNKITPE
VQHIQARLLVILGHSLAALRHFSPDLLTILLNPSVDVLEYPVLLSLGFSTPALDQEIQPS
FGMLLSCVNTCVQLLNKLDSNRTLSVGESTPSILAIAGPSAPIQHRCMDRSVIMFVLETA
VELMMVQGLRCLKDPSLPIRDRQLLKRELGTELGTFLQCLQRHFRRGGAPTSPSSASPSS
MLRTPSYSASSSVLSKSMSHALFSEAPEQAFFRVVQHFMHQILR
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgggcacaacacacgtttggagatgcaaccatgaggtgttacagaccatcact
ggtcggtcagccataacagcacggactctgatcgcagaggagctaacaaaccacaagcca
cttctgctggatggcttgctgttctacaagccacacagtgaagaggcagagaagaagctg
acggccgataagaatgttggtcgtctggagcgccgtttcctcttgcaactcagccagttt
cttgatctggatgcagtgcagtgcaaggaactgtttgaagcatacatcctgagtgccttc
cgaggaacaggtgcacagctgcagtcaattctgaaagatgagcgaagtgttcaggcgtta
ctccaaaaggtctgggagtactaccacacggaacgcatgatgcttctccattgcatcaaa
catcttttcagtttccatacagatgtggaccacccttaccaggagcagtatttggggtgt
gtctcgaagctggaggaaaagaaagtgtacgagagacttttgaagcagtatgagaccagt
tttaatntcccggtacccacccgtcacaagaggggtcctctaatgagtgagaggcacagc
atcagatggtgtctgcagggtctgagggaacaatgtgagcttcttgagatcatcctgctg
tatgtccgcgatcaagacgaccccactcagtatctcctacctctcgcacaactcttccaa
aaacaaggttttgggacgaggcaaccgtatcgctatcttctagatgcagaggacctagct
catcatctcacagcacggattggattcttgtgtggtatgctactgatcgagtgcatgaat
ctctacatgctaatgaccatgcctgaaaaggggagcgtaccagtgcacactctgacgtca
aataaaaagcttactggggagctaacgttgatattccaaagcctcggtggccagccagcc
cacgggccggtccttctcgcctggttggtactgaacggcaccctgtggccggaccgcgac
atggcgctggtacgcaagctaggacagcaggctgttcacctgcaggtgtttcgctacatg
gccgctcagctcgacgggttacccagccagcagaactcggtgatcagtttactgtgccat
gttgtcgtgtacacccttctaacgatagtcctgactctattctgtgaagacaccttgggt
ggtcgacaggatttgatagagctagcctgccagctcctcaggcaaccccagctttgtcaa
gagttctgggaaagcgacattgatggcggtatattctccctccttcagtcgtcaaccaac
agcttccccttggattttaatccgctcctaaagcttctcactccgctggcaagcgagggc
agcagacaggtgctaatgtatgttgatcgtcttcctacgttcaccgagccattggacaac
aacagatcaggtgatctacggagcacgaatcagagaggagtgtttgagctggtgcgggac
aaggtagtcctgccggcaggtgatcactgcgccggcttcatcatacaagctggtactctg
ggatgtcaagtacagcaagaacgcggtgaactgattcgctgggattctgatttcagcgga
tgggagttgtttcattgcctcatagactggctcctagtccgaatacgacaagggaatatc
ccttcagccgtccaagtcggccaagccgaagccatcatcaaccttgtgacccaaatactg
gaagctgattggtcactggcctccaaactgcagccaatcacaaactgcctttatccattg
atttcaagtctctgtacgctaacacaaccgcctctcagtctgttggcagcctgcatcaaa
tgcatcacagtcatggcagcccaccaacccaagcaggtgtggcagagaatacaaaagata
gggttccttccgcacaccggaaatgtctacagtgacgtctccgttgcaatcagtggtgaa
ggcatctacccagcagagtacggcaagctactcacaggccaagagcagccgactggtgaa
tacccagtcactttagaattcctacgcctcgtcatgacactcctgaagggactctgcaca
tcggaggtaaacacagcgacctcacaggatctccttgcgtgcgtcgtcttcatacagagg
gaggtgttcgccgcgttccacaactggagatacgcgcgctttgatgacagagagaaagtc
ggtcagtgcagtttggatatatttcatgtggcactgcatgttctgccagttattggtaaa
caatcatccaccatcatcaaagctgaatcatctcggccgggcaaagacgtctctaagagc
gctgtctcggtgcgagagacctgcttgcatggattcctgttcacgtcggccggggaggcg
ttgctgtacatcgtcgcatccggtatcgacaccctggaacaaagaatcatcgatcaagga
agtaactttgacggcccagcagagcggctctcccagctcatcaagctctctctgtccatc
ttgaaccgtctcctcctcctgaagcctcgagacctacctccttgccccctggagcaagcc
ctgacctctcacaccaccgggctaccccatcagcctcatctcattggtctgatcgcaggg
tacatctaccaccgacacgaccccaggcttcccacgctggcaacgctgcttctgaaacga
gtcgccatggtggctccaatgtcaatatttggttgtctggggagtcaagcagcagccatt
agagatatctatctgtctcgccttcaagcccactcagaggatgaaaggttaaaggtcggc
atcttggagttgctgactgttgccgtggaaacccagccaggactcagcgagttattcctg
aacttacagaaggtcaaactgggtcaggctgaggagggaaaggtgggcagtagctccgcc
ctcccatcgtctacccctaagtttgagattggtgaggtgagttgtcttcatgccgtactg
gatgccattgaagaagtaaagcagggtacaactcattgtccaccagatctacactgcgct
gctctgggattcctccaggcattatgggaggactgcagagagtcggcgctgtctgtacta
cgagcaaggccaaagttctgggttgatgtcaccgctccattgtttaaagacctgccacct
atagagggcagtacacagagtatgagcaccaacatcaagatttgcgcctacgccttcaaa
atcttgactttggagtgctatcatgtatctagtgaaaatcttgaagaaggtctgaaggtg
atcttgaagaagttgaagcaagagggtcgctacacgtactggtcagggtgtatccgaggt
ctcctggagtctgaagctggtcacctgactgacctagaggagtatctgatcagagagcat
gaactcttggttctagtccaggcctggcggactctactcctagtcaccacctccacaaat
ggaaaggccatcgagatgtcggatgtcaaagttcaatccgctattctgagtgacattgcc
gcctgcatcgactctcagtcgtgcctgtttgactctgtgctgaaccagaaagcttgctcg
ttgctgtccaatctctacatgtcactgctgacccactggtctagaacccagaccagccaa
tggaagcacgtcaacacgctggtaaccgtgctgaagagaataacggactcggactccccc
ggcctcagccatgctgcgacgtccatcatggctgcactcaccacactcctcaaacatcgc
accagcaaacaagctcttcaagtagaaacgatggagtccctgctagggataacatctcta
gcgctacaacaaagcagcatgttctacctgaacccaccgaagaacgcaaaccacgctgga
ctcgtgagggattccgacgagggtgctgttcaggggtctggggcggcgtccgacgcttcc
cacaacggccaggagaggctgatgggaacccggggaacggccaatggaatggatagagag
aaagacttcactggtgcccagcatgcttctaaatattcgatgccgacagttgctgcttat
ctcctggatgagttactcgttggtgagaagtcaaggactgaagtctggctcccactcgtc
agacagcacggcatcttgagtcttctgctaaccaccttacagtcttgcatacagattaag
agaggcatccattacactgaagcagttcttctgttgctcttagacctagcaagcattcct
gaggcagcagagtccatcatggtcaggggtctcgttcagcaggtttgcctgccgttactt
caacttcaccaacagaatggagaggctggtctgacgtggaacaactcatccaagacagag
caaacagacttgttgacgtggccgtccatctatcgccaagccgtgtctgtcatgactgtc
atgctggggactttgaagcatactttcctccaagacgccctggacttcttcggcgtacat
cgtgagcgaatgatgaagtgcctagacgccgttcaatacaaccagagcagaccttgcctg
atggaggtagagactaccagtgccttcatctaccgtctgtccctcttcgctaaggacctc
ggctgtcatatgaagacatgggagctacaggctctactgtttgccctgacatctctcact
cattgctgtgtggcgctactcatcagaccaagactacttcagtatctctcggagaagagt
agcaagaattctgagctcggtaagcagcaaccgactgctctaacgatgagagtgactccc
ttgagactacgtcagcaggtaacagcaacggacttgactgataataagatcaccccagag
gtccaacacatccaagctagattgctggtgatactcggacacagtttggccgctctgaga
cattttagccctgacctgctgaccattctactcaaccctagcgttgatgttttggagtac
cccgttctcctgagtctagggttcagtaccccggctctagatcaagaaatccaaccctca
tttggaatgctactgtcctgtgttaatacatgcgtccaactcctgaataagctggattcc
aatcggactttatcagtcggtgaatccacacccagtatcttggccatcgctgggccgtcc
gcccccatccaacatcgatgcatggacagatccgttatcatgtttgttcttgagacggcg
gtggagttgatgatggtacagggtctacgctgcctcaaggacccatcacttccgatcaga
gacagacagctcctcaaacgagaactgggaaccgagctgggtactttccttcagtgtctc
cagcgccatttccgccgagggggtgccccaacctctccgagttcagccagtccctccagt
atgctacgcaccccgtcatactctgcctcctcctctgtgctctccaagtcaatgagccac
gcccttttctctgaagcccccgagcaggcgttctttcgcgtcgtgcagcattttatgcat
cagatcttacggtag
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integrated database retrieval system
