Asterias amurensis (Northern Pacific seastar): 139948324
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Entry
139948324 CDS
T10870
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
139948324
Enzymes [BR:
aamu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
139948324
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Gene cluster
GFIT
Motif
Pfam:
GDPD
CBM_20
RVT_1
Motif
Other DBs
NCBI-GeneID:
139948324
NCBI-ProteinID:
XP_071802542
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All DBs
Position
15:12577632..12601783
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AA seq
689 aa
AA seq
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MDGIVALATQVGLGTKLPKNLQSSSGLRVPQGMVLGPWLFLMYIKDLQDSVSSQIRMTCT
VHFHVETTALTEDKIVCLTGDASELGQWSVSQVIRMSSHDGAVKQGRWSIVVTLPRDREV
KYRYAICSFHGNSDAVRVLQWESARIPRTLLTQGDKMTVDDGKFGTIDGVSKIERGWLTT
HSEYRLMVDSDPFTPAAGCGVSAYSIHISASSQDDIGSGQQTGAGKTSPSKRMKTCCKTE
PVLIRVLNSEEHQPHEQQPGGRLINSDDYSIYSVQSMKPGSVVFTIDLYSCDNESNGPTL
LGKSWLLGSNVKSDATEDQVLPVLLGTQIVGVLSVRSIVIHPLSPSSLCNMEVSYSTHWK
WNRATLDGSHRGFGRSHRDSSLLQDIPVYSHVPENTIRAFQKGALHGADFVEFDVNVTKD
HVPIVYHDCEAKLTTKDTSKDSSAPLKLPFWAMTLDQLRSLRKGYPFVVDEVSPYHSKQG
ESPSLSEADWPEEIRPFPELQQVLHALPIHCGANIEVKFPMTMEDEAKESDFPPPDRNTI
VDTILNIVLRHGGARRIVFSAFDPEICTMLRLKQNKYPVHYLNYGRTDKYLCYKDPRSNT
VTNAMWFALSEEMAGLVCHNDDVIREPSILKAANDKGLVVFVWGEDNNRPDLVKSLKDMG
VQGIIHDRVSLNPENSPNIYLQEKGAPRN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacgggattgtagccttggccacacaagtggggctagggaccaaactgccaaagaat
cttcaaagctcatctggactgagagttcctcaagggatggtcttaggtccgtggttattc
ctcatgtatattaaggacctccaagactcagtaagctctcagattaggatgacgtgtact
gtgcactttcatgttgagacgacagcattaactgaggacaagatagtatgcctgacgggt
gatgcatcagagctcggacaatggtcagtctctcaggtcatccgtatgtccagtcatgat
ggagcagtcaagcagggcaggtggtccattgtggtgaccttgccgagagacagagaagta
aagtatcgctatgccatctgtagtttccatggtaactcggatgcagtcagagtacttcaa
tgggagtcggccagaatcccacgcaccctgcttacacaaggtgacaaaatgacagttgat
gatggcaagtttgggaccattgatggagtaagtaagattgagcgaggctggctaacaacc
cattcggaatatcgcctgatggttgactccgatcccttcactcctgcagctgggtgtggt
gtgtctgcatacagtattcatatctcagcctcatctcaggatgacattgggtctgggcaa
cagacaggggctggaaagacgtctccatcaaagagaatgaagacatgttgtaaaacagaa
ccagtgctaatcagagttttgaattctgaggagcaccagccacatgaacagcagcctgga
ggtcgactaatcaactctgatgattattctatctactccgtacaaagcatgaaaccagga
tcagtagtgttcacaattgatctctattcatgtgacaatgagtcgaacggtccaacttta
ctcggaaagagttggcttcttggaagtaacgtcaagagtgatgcaactgaagaccaagtt
ctgcctgttctccttggtacacagattgtaggagtgctctcagtgcgttcaatagtaatt
caccctctgtccccatcatccctgtgtaacatggaggtgtcttactctacccactggaaa
tggaacagagccaccttggacggaagtcatcgtggttttggaaggtcacaccgagacagc
tcacttcttcaagatattcctgtttactctcatgttcctgagaacactattagggctttc
cagaagggtgcactccacggtgctgattttgtggagtttgacgtcaacgtaaccaaggat
catgttccgattgtctatcatgactgtgaagctaaactgactacaaaagatacatcaaaa
gacagttcagcgccacttaagttgccattttgggcgatgacactggatcaactcaggtca
cttcggaaaggttatccttttgtggttgatgaggtgtcaccgtatcattccaaacagggc
gagtctcctagtttgagtgaagctgattggccagaagagattagaccattcccagaattg
caacaggtgctccatgcattaccaattcactgtggagccaatattgaagtcaagttccca
atgaccatggaggatgaggccaaagaaagtgatttcccacctccagatagaaatacaatt
gttgatactattcttaatattgtactgagacacggtggggccagaaggattgtcttctca
gcatttgatcctgaaatctgcactatgttacgtctgaagcagaacaagtacccagtgcat
tatctgaactatggcagaacggacaaatacttgtgctacaaagaccctcggagtaacact
gtgaccaacgcaatgtggtttgctctctctgaagagatggctgggttggtgtgtcacaat
gacgatgttatccgagagccttcaatactcaaagcagccaatgataagggcctagtggtg
tttgtgtggggtgaagacaacaacaggccagaccttgtgaagtcactcaaagacatgggt
gtacaaggcattatacatgacagggtaagcttgaatcctgaaaacagcccaaacatctat
ctccaagaaaagggtgctccaagaaattaa
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