Asterias amurensis (Northern Pacific seastar): 139948413
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Entry
139948413 CDS
T10870
Name
(RefSeq) uncharacterized protein
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04820
Cytoskeleton in muscle cells
Brite
Glycosaminoglycan binding proteins [BR:
aamu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139948413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139948413
NCBI-ProteinID:
XP_071802660
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All DBs
Position
15:16345589..16387308
Genome browser
AA seq
1771 aa
AA seq
DB search
MRAEALTLFVLFLVSTGDILDDILFATVEVFHPQSYGCRDSGWPGRLGTGTGGHSCETRG
NIGSLSGRSLRRGLMLADAQEDKRILPPGTVDLLRLLREGQEFKGVNQVPDYEEQCYIYR
FRKDTDVSGPSTDFFGPRFPKSFSIMFKIKYSSEKSQNLLTLVDNDGNIQFQIRMGLHVV
EIRIRTSSLIAYQLYSESFADDQWHNIGLSISNKQKKFKGYMDCNELSTFPLRSKFDIST
DGRMIVGGTVLETEFPFLGRIQNMYYHDSFAAGSDCSTYFQCESEPLPTTAYPETTSVEP
TWPDWLSPHTTEGPLPEPTSPEPVTPQPPPEPPLQPPTVEPPSTAALPSTSATDPYLIPA
SVKTTSQTYLVGTQHPLIKFGMPGLPPGFVEELLISESEDTVILLLEELALAMPTVYGRV
GPPGEPGPQGEKGPPGEEGPKGTKGIKGMMVPAYPGFRGPRGPPGLPGRKGDEGPPGVEG
YPGAKGGMGRRGLPGMQGPRGKRGQRGLPGQRGDMGERGEDGRDGVKGSPGILGSIGANG
QRGLLGQTGAMGDPGQRGQTGTPGMPGFPGFIGHPGPEGEAGEPGEGSEPGPPGPKGGKG
EPGPPGFTGYPGMDGDPGDEGRNGSFGLPGGTGTQGPVGRRGEQGPPGEPGPKGRNGSQG
YQGARGRIGLSGDTGRPGATGPKGLLGRDGPEGAPGESGLEGYEGDRGEKGIVGPTGPQG
QRGESGLDGDNGIPGVKGEKGDLGPNGFPGYPGYRGNRGLPGIDGKPGNMGDVGDPGPIG
APGNNGTEVKGPQGFAGPVGPPGPPGLPGYSGTPGPRGPTGPAGEAGVTGVHGMNGTKGR
AGVAGLPGYPGEGGLTGITGKKGEVGYEGLAGQLGERGEPGKPGLKGEPGEPGLPGSPAS
DGYRGDEKDSARGEPGKPGLKGEPGEPGLPGSPASDGYRGDEKDSSRGEPGKPGLKGEPG
EPGLPGSPASDGYRGDEKDSSRGEPGKPGLKGEPGEPGLPGSPASDGYRGDEGMIGEDGE
MGPRGADGPPGVKGPTGVAGDPGKRGPPGDPGGKGEPGEAGKRGMRGDAGRPGPQGKRGE
KGPKGEFGGGGGLGLLGRAGRRGQFGIRGIYGTKGEKGETGELGEPGDRGPMGERGITGM
QGPQGQQGVPGVRGPPGPKGVQGPQGPQFSGLGEKGRKGIEGVTGVQGPQGVPGDMGPPG
PIGTKGDMGIEGDMGPPGEKGTVGPKGNEGLPGRNGSKGFSGLKGTKGSKGVQGEYGRAG
FSGAPGIRGTPGAKGEDGKLGPHAPPGFPGYFGTQGLKGRVGLRGRKGRSGVKGTPGVQG
RPGPEGDKGRKGSRGPLGREGYKGGLGEPGYTYPGEEGIDGVNGQRGLKGEKGNRGPQGP
VGPLGRAGYITRGASGPIGLPGERGPKGEKGPAGEPGIPAKPGETLVEGPPGPPGPRGPP
GPPGKPGKRKGEKGDMGPKGEAPRGEKGKRGKKGAPNDPPVRGPKGPKGDPTPGNAGDPG
EPGPAGNPGGRGPKGYKGNPGTKGVRGQPGPPGPPGPPAGSPPAVSPTRATSSTALPPTT
PVPIVPDLMKKTGTKANPAANCKDLKEDFPDYPDGQYWLDPNEGSDGDKFQAQCDFTGGG
RTCVAPATETIETKAWPKSEGWFSTWADGVRIRYTANRVQFRFLQLKSKKATQQITYKCQ
RSVAYFHQKGNHHDKAAEFKAHNDEAITHESPIMQVTADGCQTAPKKVKQTVFELSTSEV
ELLPIMDVLPKGYNSNTGQKFGLEIGPVCFL
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagaggctctgaccctatttgtgcttttcttggtgtctactggagatattttg
gacgatattttattcgccaccgtggaagtttttcatcctcaaagttatgggtgcagagac
agtggttggcccggtcggcttgggacaggcaccggggggcactcgtgtgagacacggggg
aatatcggtagtttgtccggtaggagtttgcgacgtgggttgatgttagctgatgctcag
gaagataagagaatactaccaccaggtactgttgatctgttgagattattacgagaagga
caggaatttaaaggtgttaatcaggtaccagactacgaagagcagtgctacatttacaga
tttcgcaaggataccgacgtttcaggcccgagcacagatttctttggcccaagatttcca
aaaagtttcagcatcatgttcaaaatcaagtattcgtcagaaaagtctcagaatctcctg
acgctcgtcgacaacgatggcaacattcagttccagatccggatgggtcttcatgtggtt
gagataaggataagaacatcctccttgattgcttatcaactttacagtgagagctttgct
gacgatcaatggcacaacattggtttgtccataagcaacaaacagaagaaattcaaaggc
tacatggattgcaacgagctgtcaacgtttccgttacgatccaagtttgatatcagcaca
gacggcagaatgatagtcggtgggactgtacttgagaccgagtttccttttctgggaaga
atacaaaatatgtattatcacgactcctttgcagcgggatcagattgttcaacatatttc
caatgtgaaagcgaaccgcttccaacaacagcgtatcctgagacaacatcagtagagcct
acatggcccgattggttaagtccccacaccacagagggtcctcttccagaacctacaagc
cctgagcctgtgaccccgcaaccaccccccgagcctcctctacaaccacctaccgtggag
ccaccaagtacagctgcactgccaagcacttcagcaaccgatccttacctcattccagct
tctgtcaaaactacttcacaaacttatttagttgggacacaacatccgcttattaagttt
ggtatgccaggcttacccccagggtttgtggaggaacttttaatatccgaaagtgaagat
acagttattctcctccttgaggagctggctctagccatgccgactgtttatggtcgggta
ggtccaccgggggagcctggtccacagggtgaaaaaggaccacctggtgaagagggacca
aaaggaaccaagggtatcaaaggaatgatggttccagcatatccgggtttccgtggtcca
agagggccccctggtctccctgggaggaaaggagatgaagggccaccgggtgtagaaggt
tacccgggtgcaaagggtggcatggggcgacgtggtctccctggaatgcaaggaccaagg
ggtaaaaggggtcagcgtggtttaccaggtcagcgtggagatatgggtgaacgaggagaa
gatggaagagatggagtgaaaggttctccggggatcctggggtcaatcggtgctaatggt
cagcggggactacttgggcagacaggtgctatgggagacccaggtcaaagaggtcagaca
ggtacaccaggaatgccaggatttccaggcttcattggacatccagggcctgaaggggaa
gcaggagaaccaggtgagggttcagaacctggaccgcctggaccgaaagggggcaaagga
gaaccgggaccgccagggttcactgggtatccaggaatggatggtgacccaggggatgag
ggaagaaatggttcgttcggtttgcctggtggaacaggcacacagggcccagtcggcaga
cgtggtgagcaaggaccaccaggagagcctggacccaagggcaggaacggcagccagggt
taccaaggggccaggggcaggatcggactttctggagacacaggcagaccaggagcaact
ggacctaaagggctattgggtcgagacggtcctgaaggagctcctggtgagtctggatta
gaggggtatgaaggtgaccgaggtgagaagggtatagtgggaccaacaggtcctcaagga
caacggggtgaatcaggattggatggggacaatggtatacctggagtaaaaggagaaaag
ggtgatcttggacctaatggatttccagggtatcccggttaccgtggtaacaggggtctg
ccaggtattgacggcaaacctggaaatatgggtgatgtgggagatccaggtcccattggt
gcacctggtaacaacggtactgaagtgaaaggccctcaaggatttgcaggtccagtgggt
ccccctggaccgcctggtttaccaggttattcaggcacaccgggcccaaggggaccaaca
ggacctgctggggaagcaggtgtgaccggtgttcacggtatgaacggaacaaaaggaagg
gcgggagtggcaggtttgcctgggtatcctggtgaaggcggcttaacaggtataactgga
aaaaagggtgaagttggatacgaaggtctagccggtcagctcggtgaacgaggtgaacct
ggtaagccaggtctgaagggcgagccaggagaacctggtcttccaggatcgccagcttca
gatggttacagaggggatgagaaagactctgctaggggtgaacctggtaagccaggtctg
aagggtgagccaggagaacctggtcttccaggatcgccagcttcagatggttacagaggg
gatgagaaagactcttctaggggtgaacctggtaagccaggtctgaagggtgagccagga
gaacctggtcttccaggatcgccagcttcagatggttacagaggggatgagaaagactct
tctaggggtgaacctggtaagccaggtctgaagggtgagccaggagaacctggtcttcca
ggatcgccagcttcagatggttacagaggggatgaagggatgatcggggaggatggtgag
atgggacctagaggagctgatggacccccgggtgttaaaggaccaactggagtggctgga
gatccgggcaagagggggccaccgggtgatcctggcgggaaaggcgaaccaggagaggct
ggcaaaagaggaatgaggggtgacgcaggaaggccgggtcctcaagggaagaggggtgaa
aagggacccaaaggagagtttggcggaggtggaggacttgggttactcgggagagccgga
cggcggggccagtttggcatacgaggtatctatggcaccaagggtgagaaaggagagacg
ggtgagcttggagagccgggtgacagaggacccatgggtgaacgaggtatcaccggaatg
caaggtccacagggacagcaaggggtcccaggggtaaggggaccaccaggtcccaaggga
gtacagggaccccagggaccacagtttagtggcctcggcgagaagggtaggaaaggtata
gaaggtgtgacgggagtacaaggaccacagggtgtgccgggtgatatgggtccccctggg
ccgattggtactaaaggcgacatgggtatcgaaggggacatgggtccccctggagagaag
ggaacggtaggacctaaaggaaatgagggacttccaggtcgaaatggatccaaaggattc
agtggattaaaaggaaccaagggtagcaaaggagtacagggtgaatatggcagagcgggc
ttttctggtgctccgggtattcgaggtacacccggggcgaagggtgaggatgggaagctt
ggtccacatgccccaccgggcttcccagggtactttggtacacaaggacttaaaggaaga
gtgggactgcgaggacggaaaggtcgaagtggtgtcaaagggacaccaggggtgcaggga
cgacccggacctgaaggagataaaggaagaaaaggatccagaggcccactaggccgagag
ggttacaaaggaggtttaggggaaccaggctacacctatcccggtgaggagggtatcgat
ggagtcaacggacaaagaggattgaaaggggaaaagggcaacagagggccacagggtccc
gttggtccactaggaagggcaggctacattaccagaggggcaagtggtccaatcggacta
cctggagaaaggggaccaaagggtgaaaaagggccagctggtgagcctggaataccagcc
aagcctggggagacgttagtcgaaggaccacctgggccgccaggacctcgtggcccaccg
ggacctccaggtaaaccagggaaacgaaagggagagaaaggtgatatgggtccaaaaggt
gaagctccacgaggcgaaaagggtaaacgtggcaagaaaggcgcaccaaatgacccacca
gtgcggggtccaaaaggaccaaagggagatccaacacctggaaatgctggtgatccaggt
gagcctggcccagcagggaaccctggtggacgggggccaaaaggttataaaggaaaccca
ggtactaagggtgtcaggggtcaaccaggacccccgggtcctcctggacccccagcaggt
tcacccccagctgtgagtccaacacgagccacatcctcaacggcgcttccaccgactacg
cccgtcccaatagttccagatcttatgaagaaaactggtacgaaggccaatccagccgcc
aattgtaaagatttaaaagaagattttccagattatcctgacggtcagtactggctggac
cctaatgaaggttcagatggagataaattccaagcacagtgtgattttaccggcggtggt
aggacttgcgtcgcccctgctactgaaacaattgaaacaaaagcgtggcccaaaagtgag
ggttggtttagtacatgggctgatggcgtcaggatacggtatacagcaaacagggtccaa
ttcaggtttttacaattaaaaagtaaaaaggcgacacagcaaataacctataaatgtcaa
cgaagtgtagcctattttcatcaaaagggcaatcaccatgataaggcagccgaattcaag
gctcataatgatgaggccataacacacgaaagtcccataatgcaagtcacagcagacgga
tgccagactgcacctaagaaggttaaacaaaccgtgtttgagttatcaaccagcgaggtg
gagctgctccccatcatggatgtgttacccaaaggttacaacagcaacactgggcaaaaa
tttggtttagagatcggtcctgtgtgttttctatga
DBGET
integrated database retrieval system
