Asterias amurensis (Northern Pacific seastar): 139948504
Help
Entry
139948504 CDS
T10870
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03008
Ribosome biogenesis in eukaryotes
aamu03013
Nucleocytoplasmic transport
aamu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139948504
03015 mRNA surveillance pathway
139948504
03008 Ribosome biogenesis in eukaryotes
139948504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139948504
03009 Ribosome biogenesis [BR:
aamu03009
]
139948504
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139948504
mRNA cycle factors
Stress granule specific factors
139948504
Ribosome biogenesis [BR:
aamu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
139948504
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_NXF2
UBA_8
LRR_9
RRM_NXF1-2
Dro
Zn_peptidase_2
Motif
Other DBs
NCBI-GeneID:
139948504
NCBI-ProteinID:
XP_071802775
LinkDB
All DBs
Position
1
Genome browser
AA seq
716 aa
AA seq
DB search
MSRGNNRKDNFRSGSGGGRDGGGRSQQFYGHDDRAQDDRRRDDGGNSNWRGGHSGSDGDN
WRGGRGRRGGRGASSNRGGGRDNGGGGGSGGSGGGSYGGKWRGGKGPRRGRGGGGGGGND
GGNNQGPNPRSRLQDDDGDVMMGDHDAGPSQRFNPYGRSNTNRRGGSRGRDRDNRSGSQN
RSDGGSMSRLGLPINQGSRGGSGSRQGGRGKGALTWSKITIPHGRKVEKDWLLRSLQNIC
RVPFIPLEFHLEGEMAVFYVDDIETGNALRSLSGRITSKTGHKIIVVCRPSRPPNNKLDE
GSVEAMKVCLSDRYDPSTKSLNLSQLIQDQGLKSKGVNNVLNRPQVMETVVMIISENIPE
VLSIDLSNNKLYSLTIFSKLAEKATSLRSLNLAKNVMRGEADLENIKDFPLEDLILEDNP
IVQRSNYTSIVRRCFPKMMRLDGKELPPPITFDLETPTVLPPVQHSFFGNEAIKKILDKF
ISQYFTVFDSGDRQQFIEIYHEQSCFSLTTQAVSGGPSYLKKYFSISRNLLRIKEPSQEL
RLFKHTKLSVVAFLNEMSPTLHDTNSFQVDLSLAQGNLVSFTVHGIFKEFNTSRSTSQLI
SFSRTFLAVMQPPTLCIINDHLSIRNPTQAQQKAAFISPAPTPTPSPVRVPQEAAHIAST
LTSQHQEMIASFMKDSKMNIQFSTQCLSENNWDYSKAGEQFTKLHAEGKIPAEAFK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaggtaataatcgtaaagataattttagatctgggagtggtggtggcagagat
ggtggtggtcggagtcagcagttttacggtcatgacgatcgggctcaagatgacaggcga
cgagacgatggtggtaattcaaactggaggggaggtcactcggggtcagacggtgacaat
tggagaggaggaagaggcaggagaggcggaagaggagcgtcatcaaacagaggcgggggt
agagataacggtggtggtggaggaagtggcggaagtggcggagggagttatggggggaaa
tggcgaggagggaagggtcctagaagaggaagaggaggaggaggcggaggagggaatgat
ggaggaaacaaccaaggtcccaatcctcgctccagactacaagatgatgatggcgatgtc
atgatgggagatcatgatgctggacctagtcaaagattcaatccatatggacgatcaaac
accaacaggagaggaggcagccgcggtagagaccgagacaaccggagtggcagtcaaaat
agatcggatggtggatccatgtccagactaggtcttccaatcaatcagggaagcagagga
ggctctggtagtcgtcaaggtggacgaggcaaaggggccttgacatggtctaagatcacg
ataccacatggaaggaaagttgagaaggattggttgctgagatcgttgcagaacatttgt
agagtcccctttatacctctggagtttcatcttgaaggagagatggcggtgttctacgtc
gatgacattgaaacaggaaatgctcttcggagtctcagtggaagaatcacctcgaagacg
ggacataagattatcgtggtgtgcaggccgagtagacctcctaataacaagcttgatgag
ggctctgttgaagcaatgaaggtttgcttgagtgatcgctacgacccatccaccaaatca
cttaatctcagtcaactaatacaagatcaaggtcttaaaagtaaaggagtcaataatgtg
ctaaaccgacctcaggtcatggaaacagttgttatgatcatttcagagaacataccagag
gttctgtccatagatcttagtaacaacaaactctacagcttaaccatattttccaagttg
gctgagaaagctaccagtttacgaagtttaaaccttgctaagaatgtgatgcgtggtgaa
gccgatctagagaacatcaaggatttccccctggaggatttgattctggaagataatccg
atagttcagaggtccaactacaccagtattgttcgaagatgtttccccaagatgatgaga
ctagatggtaaagagctcccgcctcctatcacgtttgacttagaaacgccaacagtcctc
ccaccggttcaacacagcttctttggcaacgaggccatcaagaaaattctggataaattc
ataagccagtatttcacagtgtttgattctggagacaggcaacagttcattgagatttac
catgagcagtcctgtttctcattgactactcaagctgtttctggcgggccctcctacttg
aagaaatacttttcaataagccgcaatctcctcagaataaaagagccaagtcaggaactg
aggcttttcaagcataccaagctatcggttgtcgcctttttgaatgaaatgtctcctacg
ctgcatgacaccaactcgttccaggttgatctatcccttgctcagggtaatcttgtgagc
tttaccgtgcatgggatcttcaaagaattcaataccagtaggtccacctcccagttgata
tcgttcagtcgcacctttctagctgtaatgcaaccaccgacgttatgtatcattaacgat
catctgtcaatcaggaatcccacacaggctcagcagaaggctgcatttatttcgcctgct
cctactccaactccaagcccagtgagggtacctcaagaggccgcgcacattgccagcacc
ttgacgtcacagcatcaagaaatgatcgccagtttcatgaaagattccaaaatgaatatt
cagttttcaacacaatgtttatccgagaataactgggattacagtaaagctggggagcag
ttcaccaaactacatgctgaaggcaagataccagcagaagccttcaagtga
DBGET
integrated database retrieval system
