Asterias amurensis (Northern Pacific seastar): 139948665
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Entry
139948665 CDS
T10870
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03040
Spliceosome
Brite
Enzymes [BR:
aamu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139948665
Spliceosome [BR:
aamu03041
]
Complex C
Other components
Step II factors
139948665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Helicase_C
RRM_1
KH_DEAH11
OB_NTP_bind
DEAD
IBR_1
zf-RING_11
RBD_DEAH11
HA2_N
HA2_C
IBR_2
zf-RING_2
AAA_19
AAA_22
AAA_7
AAA_16
Motif
Other DBs
NCBI-GeneID:
139948665
NCBI-ProteinID:
XP_071802991
LinkDB
All DBs
Position
16:16553019..16593791
Genome browser
AA seq
2646 aa
AA seq
DB search
MMASREHFPIILSSDCDNMGKDDPMVFSDSTGSSEETSCEEETDDGEEKGEEEEVGGGGL
GKDLPKDDREGSMGKTKVSAVKKAVQESSSKDTSSSSAKQEKKTRSRPPRERRKRRTLET
NGAGETTSQRLKLQVQVNNICTDQDSFKTFLGCLNVTNYKKIYWRMKDLQNSQASILFKN
QEDAATAQGILNHCSIGASDKKLSAFLQDRRSRRSTRNKIGKTSSAHSAQDNQHKAVDHR
NNPHQNNVHPDGQFPSYDQRQRHQQGQRYHDPADQKYSRPESDQHRSSDRGIYQGRPRGG
YMPDDRPRPSDMAVDHRSSQTGRGNSSGRGNYRGHPRGGYTPDDCPQPSDMAYDHRSSQT
GRGNSSGRGNYRGHPRGGYTPDDCPQPSDMAYDHRSSQTGRGNSSERGNYRGHPRGGYRP
DDRQRPSDMAYDPQYSQPGRGNSSGRGNYRGHHRGGYSPDDHPRPLDQNPDHRPSQPGRG
NSSRQRNYEGHPRGGYTPGYRRPSLTLSEKDVQLRGDQSQHPSRAPRQPQAPEKNIPSLM
SLPLAPNIPYDGDDDQSSIASGMSERSGTSSQPISLHVKNIDDGVSNDGFCHFLSDKMIS
FSDVDFFTSKSGRRFAIIHFASVIETKKARSFLHNRWIFRGGPKMCVSYSHRKAMASGDL
HPPSFEATGDPEGATRGSHEGRGQGNRGRGGRNRGESSRGGRSRGGRGRGRRTRNWRQKI
GEDFDNQSECSEVRSICSVVSHASSSQVKQSSSLWVTNIGEYFDLAEFYDFLESLDLNCQ
CSGLKPSQEHNNQFAVLQFPDLKMATAAVGVLNNDPWRLGNDTPIKASFPVSKEPYQNKK
SGRSLHVEQLGCVPDESRVNVERWIEDAQQTKDSKVESHRGYRQSKREQEQKGGRGQGRN
GRGHKGKGSSVGDDVRSQLRSGEKTDESHDGDKGTTGRLVRSKYKPCTGKDNTQERSPNE
VVLTDLPRNISESDVVYLVREECHGLVDGVLASGRCSLKFKRREDAMEAVCKLYGKPISG
HCIKPVLSWHNEEVEPQIARKLLKDFKENEMPEKVSEIKHIIKEECKVINSDLSDCRNAF
KENLSYAEIQRYEISIETHEHHLEEKQRFLDEFNNACLNIETALEGLEPETQTLSEVHKI
RHQFLRECRRLDSPLPVYGYRSRIEEAMRLNKAVVLQGETGSGKSTQIPQYLVDMALESQ
EDEGSSQRPQWRVVCTQPRRVAALTLSKRVAEEYGCQVGEEVGYFVGNKKSVSAKTVVTF
MTDRKLLNLIIADPNLSDYTCVIVDEAHERSVDTDILLATLKKLLRSRKDLHLLIMSATI
DTTLFSNYLGECKEIKVPGRTFPVEKKWIGDDVSIGEGDYVGKAVKQTAKVHRDEKEGDI
LVFLTSANEIEQACRDLSTSLGQRPDDKDKEALILPLHGRLQPEDQMKVFADAKAGQRKI
IFATNVAETSVTIKGIRYVIDTGVVKECQYDPKRSMSLLKVTTITQASAQQRAGRAGRTG
PGVCYRLYTKEEYNDLNEMMKPEILRVHLGMAALQLLELGVEDVANFDFIQAPDREATQQ
AMTTLRLLGAVDAANKLTSLGRKMATFPMEPRLSKIILEGVEKHLTSEAVIIAALISAPG
SLFYRGGSDKDKEKADRLKLKYCHDSGDVITMLKAYGSWNSQAAAKQKAWCMENSMNSKT
LRAVRESANEAAQVLKLKHNIECNARDYKMEAIDATKTESLQKIIMSAYFQTLSLYNGHP
RAGYTVLPHQKSGFIHPSSSLVALGCNPKWVVYEEFKQTSQSFLFNVTQVNIEWLQEVAP
MFYDEIDVDALQEMALQEAPAIQLGTAVMRRLTMKRNEKVRAMEEFITEAKGSPCIIQVN
RATKELQMFMKMNICEFATSYVEIILMEELESIQREQIEVPVGESGVVRQVVVAGGQTKY
ILMPNDYRSLEVSNVTEDMSEDDLKRMICLSSYCTQEEILDVYKFQKQTTAKWGRVTFSS
PKTAEETKMLLEEEDTLQLKPILGRSFQNRDISRVSSRIVVIWYTWPSKGHAFINFDTSN
QALEMKESLLHFDFKGKQLDCQLKRNNTRALYLQRVHKDATSEELEEAIEDYTDCKKVKC
SIARQPPAILIKDDQVTQDIYKMFEGTLREDQLDINILLARSEKTQSRKAIVNFECDNED
EVDACILNIQDNPPRNTAGQIYIVKLTASCMLFCNPDVYKCIEQRITKLVEEVRGGVRNL
NVRVNKSKKTNDWVINVAGENIQEVHRTRRQLLSYIQGETVSLNDLCEEEVSFQIKYHIL
KLLHKNGLRHLTYGLEAHALVDTRRHLVVIYGKDEVREVLKEQVKNYINIICKNKLKEIS
LTAGLSEGCTKGRAIRALVRAYGPWLKKLVEETGAEAITLNMRQGNLLIEGDQNVFDNVH
KMVRNCLQEAGQQAAIRVGGEEGTAEVECGICYTAVEATEEVYRLSACSHGFHLQCLHEM
FTVRLQNASKDYPIECPCEGCGLPMLLCDFRVLCSDETKRRRLFDLALESHVTQKSEGKL
KFCPTPDCHMIYKTTKDAGVFLCPECRNRLCSSCGSEPHIGYTCEEFKASGKNFDDLAFE
KWIKRKDVKRCPVPNCGIPIEKNGGCFHMQCRECKKHICWHCLEFFDRSKLCYNHLSKKH
GGCFEF
NT seq
7941 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcaagggaacactttccaatcattttatcttctgattgtgataatatggga
aaagatgatccgatggtgttcagtgactctactgggtcctcggaagaaacaagttgtgaa
gaagagaccgatgatggggaggagaagggggaggaggaggaagttgggggaggtggtcta
ggtaaagatttacccaaagatgacagagaaggaagcatgggaaagacaaaagtttctgcg
gtgaagaaagcagtgcaagaatcatcttcaaaagatacgtcctcatcctcagctaaacaa
gagaaaaagacaagaagcagaccgcctcgagagaggcgcaaaaggaggaccctagaaacc
aatggtgcaggagaaacaacgtctcagagattgaaattacaagtacaggtgaacaacata
tgcactgaccaagactcattcaaaacttttctgggctgcttaaacgtcacaaattataaa
aaaatatactggaggatgaaggatttgcagaacagccaagccagcattctgtttaaaaat
caagaagatgctgctacagcacaggggattctcaaccattgctcaatcggagcatctgac
aagaaactgtcagcttttttacaagaccgaagatcgcgtcgttccacacgaaacaaaatt
ggaaaaacatcctcagctcattctgcacaagacaatcaacacaaagctgttgaccataga
aacaatccacaccagaacaacgttcatcctgatggtcagtttccttcatatgaccaacgc
cagagacatcaacaaggtcaacgttatcatgacccagctgaccagaaatattcacgtcca
gaaagtgaccagcatcgatcttctgaccgaggaatctatcaaggacgccctagaggtggt
tacatgccagatgatcgcccccgaccttcagacatggcagttgaccatcgttcttcacag
actggccgtggtaattcctctgggcgaggaaactatcgaggacacccgagaggtggttac
acaccagatgactgtcctcaaccttcggacatggcatatgaccatcgttcttcacagact
ggccgtggtaattcctctgggcgaggaaactatcgaggacacccgagaggtggttacaca
ccagatgactgtcctcaaccttcggacatggcatatgaccatcgatcttcacagactggc
cgcggtaattcctctgagcgaggaaactatcgaggtcaccctagaggtggttacagacca
gatgatcgccaacgaccttcggacatggcctatgaccctcaatattcacagcctggccgt
ggtaattcctctggccgaggaaactatagaggacaccatagaggtggttactcaccagat
gatcatccccgacccctggaccagaaccccgaccatcgaccttcacagcctggccggggt
aattcctctaggcaaagaaactatgaaggtcaccctagaggtggttatacaccaggttac
cgtcggcccagcctgacactctctgagaaagatgttcaactgaggggtgaccaaagccag
catccaagcagggcacctagacagccccaagctcctgaaaagaacatcccctcattgatg
tcgttgcctcttgctccaaatattccttatgatggagatgatgaccagagcagcattgca
tcaggaatgagtgagaggagtggtacatcatcacagccaatctctttacatgtgaaaaac
atcgatgacggagtgagcaatgatggattttgtcatttcttgtccgacaaaatgatatca
ttctcagatgtagacttttttacttccaaatcagggaggcgatttgctattatccatttt
gcatctgtcatagaaacaaaaaaggctcgaagttttctgcataaccgctggatttttcgg
ggtggccctaaaatgtgcgtaagctacagtcatcgaaaagctatggcgagtggagatttg
catcccccttcctttgaagcaactggagaccctgaaggggcaactcgaggaagtcatgaa
gggaggggtcaaggcaacagaggtcgaggaggtagaaatcgaggagagagcagccgtgga
gggagaagccgtggagggagaggccgtggaaggaggacaagaaactggcgacagaaaatt
ggagaagattttgataatcaatcagaatgtagtgaagtgaggagcatctgctctgtggtg
agtcatgccagttcctctcaagtcaaacagtcttcatctctctgggtaacaaatattggg
gagtacttcgatcttgcggaattctatgactttctggagtcccttgatttaaactgtcag
tgctcggggttgaaaccttcccaagaacacaacaaccaatttgctgttcttcagtttcca
gatctcaagatggcaacagcagctgtgggtgttttgaacaatgacccgtggcgtcttggg
aatgacactccaattaaagccagttttccagtatcaaaagagccttaccaaaacaagaag
tctggccggtctcttcatgttgaacaacttggttgtgttcctgatgagagtcgggtaaat
gttgagagatggattgaggatgcccaacaaactaaagactcaaaagtagagagtcacagg
ggatatcgtcaatcaaaaagggagcaagaacagaaaggtgggcgtggtcaaggtagaaat
gggcgtggtcataaagggaaaggtagctctgtaggagatgatgtaaggtctcagttgagg
agtggtgaaaaaactgatgaatcacatgacggtgataagggaacaactggcaggcttgta
aggtcaaaatataaaccatgcacaggcaaagataatacacaggaaagaagtccaaatgaa
gttgtcttaacagatctcccaagaaacatctcagagagtgatgttgtatatcttgtgaga
gaggaatgtcatggattggttgacggagtgttggcctccgggagatgctctctgaagttt
aagagacgggaagatgcgatggaggcagtttgtaagctttatgggaaacccatctctggc
cattgtataaaacctgtcctctcctggcacaacgaagaagtggaaccacaaattgcaaga
aaactactgaaggacttcaaagaaaacgaaatgccagagaaagtctctgaaattaaacat
atcattaaagaagaatgtaaagtcatcaactcggatttgtcagattgcagaaatgccttc
aaagaaaacctgtcctatgctgaaattcagcgatatgaaatttctatcgaaacccatgag
caccatttggaggagaaacaaagattcctggatgagttcaacaatgcatgtcttaatatt
gaaaccgctttggaaggtttagagccagaaacccaaaccttgtcagaggtacacaagatt
cgtcatcaatttttgagagaatgtcgtcgtttggattcccctctgccggtttatggctac
aggtctaggattgaggaagctatgcggctgaataaagctgttgtcttgcaaggcgagaca
ggatctggaaagagcacacagattccacagtatctcgtagacatggccctggagagtcag
gaagatgaaggctccagccagagaccacaatggcgggtagtttgcacacaacctagaaga
gttgcggcactcactctttctaaacgtgttgctgaagaatatggatgccaagttggcgaa
gaagttggatattttgtcggcaacaagaaatctgtcagtgccaaaacagttgttactttc
atgacggatcggaaactcctcaacttgatcatcgccgacccaaatctgtctgactatact
tgcgtcatcgtcgacgaggcccatgagagatctgtagacacggatatattgttggcaact
ctgaagaaactccttcggagcagaaaagatcttcaccttctcataatgtctgccacaatc
gacaccaccttattttccaactaccttggtgaatgtaaagaaataaaggttcctggtcgg
acgtttccagtggaaaaaaaatggattggtgatgatgtcagcatcggagagggtgactat
gttgggaaagccgtcaaacagactgcaaaggtgcatcgagatgagaaggaaggtgacatt
ctagtcttcttaacgtcggccaatgagatagaacaagcatgtcgagacttatcaacttcc
ctcggccaaagacctgatgacaaagataaagaggcactgatactaccccttcatggacga
ctccagccagaagaccagatgaaagtattcgcagacgcaaaagctggacaaaggaagata
atctttgcaaccaatgtcgctgagacctcagtgactattaaaggtatccgatatgtcatc
gacactggcgtagtcaaagagtgtcagtatgatccaaagcgcagcatgagtctcttgaag
gtgacaacaataactcaagcgtcagctcaacaacgggcgggccgagcaggtaggacaggc
ccaggcgtctgctatcgattgtacaccaaagaggaatataacgatctgaatgaaatgatg
aaaccggagattttgcgtgttcaccttgggatggcagcactgcagcttttagagcttggt
gtcgaagacgtggcgaactttgatttcatccaggcgcctgatcgagaagctacacagcag
gctatgactaccctgaggttgctgggtgccgtggatgcagctaataagttgacctctttg
ggtcgtaagatggctacatttccaatggagccacgtctctcaaagattattctcgaagga
gtagagaaacatcttacctctgaagctgttatcatcgctgccttgatctctgctcctgga
agtttgttctatagaggaggctctgataaagacaaagagaaagcagatcgtctgaagctc
aagtattgccatgacagtggagatgttataacaatgcttaaagcttacggatcttggaat
agccaagcggcggctaagcagaaggcctggtgtatggagaacagcatgaattccaagacg
ctgagagctgttcgagagtctgctaatgaagcagcccaggtgttaaagcttaaacataac
atcgagtgtaatgcaagggactacaagatggaagccattgatgcgacaaagactgagtca
cttcaaaagatcatcatgtcggcttactttcaaactttgagtttatacaacggtcatcca
agagcaggttacacggttcttcctcatcagaaatccggtttcatccatccatcttcgtct
ctcgttgcactaggctgcaatcctaaatgggtagtgtatgaagagttcaaacaaacatcc
caaagcttcctcttcaatgtgactcaagttaacatcgaatggcttcaggaagttgctccg
atgttttatgacgagattgatgtggacgcacttcaagaaatggctttgcaagaggctcct
gcgatccaacttggaactgctgtgatgagacgtcttaccatgaagagaaatgaaaaggtc
cgggctatggaagagtttataacagaagcgaaaggttctccttgcatcatccaggtcaac
agagccacaaaagagttgcagatgttcatgaagatgaacatttgcgagtttgcaacatcg
tatgttgagataatccttatggaagagctggagtctatccagagagaacagattgaagtt
ccagtaggggaatcaggagttgtccgtcaagtcgtcgtagcagggggtcagacaaaatac
atcttgatgccaaatgattacagaagcctggaggttagtaatgttacagaagacatgtcc
gaagatgatttgaagagaatgatttgtctctcatcttattgcactcaggaggagattctt
gacgtgtacaagtttcaaaagcaaactacagccaagtggggtcgcgtaaccttcagttcc
cccaagacagcggaggaaacaaagatgttgctagaagaagaggacacccttcagctcaaa
ccaattctgggacgtagttttcaaaacagagatatctcaagagtcagctcaaggatcgtg
gtcatatggtacacttggccgtcaaaaggccatgcatttatcaactttgacacgtcaaac
caagccttagaaatgaaagaaagcttgctacattttgacttcaaagggaagcaattggat
tgtcagctgaaacggaataacacaagagctctgtacctccaaagggttcacaaagatgca
accagtgaagagctggaagaagctattgaagattatacagactgcaaaaaagtcaaatgc
agtattgctcgtcaacccccagcaattcttatcaaagacgaccaggtcactcaagacatc
tacaaaatgttcgaaggaacactacgagaagatcaactagacatcaacatactgttggca
cgatcggagaaaacacaaagcaggaaggctatcgtaaactttgagtgtgacaacgaagat
gaagtagatgcttgtattctgaatattcaagacaaccctccacgcaacacggcaggccag
atttatattgtgaagcttacggcatcttgcatgctcttctgtaatcctgacgtctacaag
tgcattgagcaaagaatcacaaagctcgttgaggaggtgaggggcggagtcagaaatttg
aacgtcagagtgaataagagcaagaagacgaatgactgggtgataaacgtcgctggtgaa
aacatccaagaagttcataggacacgtcgacaacttctgtcttacatccagggcgagacg
gtatcactgaatgatctgtgcgaggaggaggtttcatttcagatcaagtatcacatcctg
aagttactccacaagaatgggttgaggcatcttacttacgggttggaggctcatgcactg
gtggacactcgtcgccatcttgttgtgatttacggaaaggatgaggtcagagaagtcttg
aaggagcaagtgaagaactacatcaacatcatctgtaagaacaaactgaaagaaatctca
ttgactgcaggtctgtctgaaggttgtactaaagggagagctataagggcattagtgaga
gcttatggaccttggcttaagaaacttgttgaagaaactggagccgaagcgataacactg
aatatgcgccaagggaaccttcttatagagggcgatcagaacgtctttgataacgtccat
aagatggtgagaaactgcctccaagaggctggacaacaagctgccatcagagttggaggg
gaggaaggaactgctgaagtggagtgcggtatttgttacacagcggtggaagccacagag
gaggtgtatcgtctgagtgcttgctcccatgggttccatcttcaatgccttcatgagatg
tttaccgtcaggttacagaacgctagcaaggattaccccattgagtgtccatgcgaagga
tgtggcctcccaatgttgctctgcgacttccgtgttctctgcagcgatgaaacaaagaga
cggcgcttgttcgatctggctctggagtcgcatgtcacccagaagagtgagggaaaactg
aagttttgcccaacaccagattgtcacatgatctataagacgacgaaggatgctggggtc
ttcttatgtccggagtgtcggaaccgtttatgttcttcgtgtggttcagaacctcatata
ggatatacatgcgaggaatttaaggcttccggcaagaactttgacgacttggcatttgag
aaatggattaaaagaaaagacgtcaagaggtgtccagtacccaactgtggaatccctatc
gagaaaaatggaggatgttttcacatgcagtgtcgtgaatgtaagaagcacatctgttgg
cattgcctggaattctttgatagaagcaaactgtgctacaatcacctatcaaagaagcat
ggtggttgttttgaattttaa
DBGET
integrated database retrieval system
