Asterias amurensis (Northern Pacific seastar): 139948783
Help
Entry
139948783 CDS
T10870
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139948783
Membrane trafficking [BR:
aamu04131
]
Protein recycling
Others
EARP complex
139948783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Sec8_N
DcpS_C
Motif
Other DBs
NCBI-GeneID:
139948783
NCBI-ProteinID:
XP_071803209
LinkDB
All DBs
Position
16:complement(15639398..15658380)
Genome browser
AA seq
960 aa
AA seq
DB search
MINMRKFKTLITRQGSGSRDDKSPTDEVARTPSPIEPIRYKNEQREFSNDPAAEAEIIES
IEKEYFNDEDFDGSEFELLKLPELDQIEPPKLAGDRDRLRRQRQSVSKKFSDVVLENQSS
YTKELQRVTDLQASLQTATIICTNGRRQLAMAKQGFTVASLSILANFRKRQQLLSLMKSL
HTIKTLQQTDIRLREMLEEEDYPGAIQLCLECQKAASTFRHYKCISELSSKLQDTLEMIE
EQLDQALSKTCSNFDVKHYEKVQTAYTLLGKTQTAMDQLHMHFTSAIHNSAFTIVLGYVE
LMSGSENTNFQKMPYKDLCGHITTDIYIPCLLDLCKALWEVMKSYYKTIEWHETNEDPIS
PIAREHNESGVEVATEMDASFNRRYIKTKLEHGLARIWQDVQQKVKTFLLGTDLSNFKYD
DFIHVLDLVNRLIRVGEEFCGSKSESLHDSLRQQSLNYFKNYHRSRLDELQMFLENEGWE
LCPVKANFTITNLHEFRFIRLTGLTQSGDQGNQSSPSISIGGKGGYFSRFWDEGSPFDRR
MDEDENEDVIGTNGVDDVDDTSLGNEESDDSDVPDELKQDFIDELTQGKLTKSSRKRRSQ
SSKGPVPVLANTTLNVLRLFGKYMQMMAVLKPIAFDVVLCMSQLFDYYLFSVYTFFATDM
NDSFGLSLSNKIRTTLKRISDNMIQQEPPPGMLPNPMENRQERIGFPHVSPIVELTGIEQ
LHGLAERIVGTESLVFLAEQFQLLQPHLESVIPASKKPFLQQFYSQTVSVASELRRPVYR
GVASRCILFERMLQLMATVKWDIKDIMSQHSTYVDVLLQDFMIFNTRLDEVGRRVSIPSP
VYNILWGHLVRLANRTYVEGFASAKKCSNEGRALMQLDFQQFLLKLDKLTDVRPIPDKEF
VETYVKAYYLSESDMEQWIKDHREYSAKQLLSLVNCAISSKKARQRLTGIVEELERTRGR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacatgaggaaatttaaaactctcatcactcgccagggaagtggttcaagagac
gacaagagtccaacagatgaagtagcaagaacaccgagtccaattgaaccaattcgctac
aagaatgaacaaagggagttctccaatgaccctgcagctgaagcagagatcattgagagc
atagagaaggaatatttcaatgatgaagattttgacgggagtgagtttgagcttctgaag
ctgccagagttggatcagatcgagccgccgaagctagctggggatagagacagactgagg
agacagcggcagtcggtttcaaagaaattttcagatgtagtactggaaaaccaatcatca
tacacaaaggagttacaacgtgtgacagacttgcaggctagtctacagacggctaccatc
atctgtacaaatggaagaagacaacttgcgatggccaaacagggtttcacagtagcaagc
ttgagtattcttgccaacttcagaaagagacaacaactactgagcttgatgaagagttta
cacacgatcaaaacattgcaacaaacagacatcaggttaagagaaatgttagaggaggag
gattaccctggtgctatacagctttgcttggaatgccagaaagcagcgagcaccttcaga
cactacaaatgcatcagtgagttgagttctaaacttcaggacacattggagatgattgag
gagcaacttgaccaggccctctctaagacgtgcagtaactttgatgtcaagcactatgag
aaagtccaaacagcttacacattacttggcaagacacaaacagcaatggatcagcttcac
atgcatttcaccagtgcaattcacaactcagcattcaccatcgtcttgggttatgtggaa
ctcatgagcggatcggagaatacaaacttccagaagatgccatacaaggatctatgtggg
cacatcaccacagatatctacattccgtgtctgttggatttatgcaaggcattatgggaa
gtcatgaagagttattacaagacgatagaatggcacgagacgaacgaagaccctatcagc
cccatagccagggaacataatgaatccggggttgaagtagcgactgaaatggatgcttcg
tttaatcgtcgatacatcaagactaaattggaacatggtctggcgaggatctggcaggat
gtgcagcagaaggtcaagacattcctcctagggaccgatctgtcaaatttcaaatatgat
gattttattcacgtcttggaccttgtaaaccgattgattcgagtcggtgaggagttttgc
ggaagtaaatcagagagtcttcatgattcactccggcagcagagtctcaactacttcaag
aattatcacagatcccgtctggatgagctacagatgttcttagagaacgaaggatgggag
ctctgtccggtcaaagccaacttcaccatcaccaacctccatgagttccgattcatccgt
ctgacaggtcttacccagagcggggatcaaggaaaccagtccagtccctccatcagtatt
ggagggaagggtggctacttcagtcggttctgggatgagggaagtccgtttgatcggagg
atggacgaagatgaaaatgaagacgttattggaaccaatggagttgacgatgttgacgat
acttcccttggcaatgaggaatcagacgacagtgacgttcctgatgaactcaaacaagac
ttcattgatgaactcactcaaggaaaactcacaaaaagttcaaggaagcgacgttcccaa
tcctccaagggtcctgtgccggttcttgccaatactaccctcaacgtgctacgtctcttt
ggaaagtacatgcagatgatggctgtattgaaacccattgcgtttgatgtcgtcttgtgt
atgtcccaactctttgactactatctattctcagtctacaccttcttcgctacagacatg
aatgattcgtttgggttgagtttaagtaacaagatccgcaccaccctgaagagaatcagt
gataatatgatccagcaggaaccaccaccaggcatgctaccaaaccccatggaaaacagg
caggagaggatcggtttccctcatgtttcaccgatcgttgagttgactgggatcgagcag
cttcatggtctagctgagaggattgttggcacggaatcattagttttcctagcggagcaa
tttcagcttcttcagcctcatcttgagtcggtgattcctgcctccaagaaaccattcctt
caacagttctactctcagactgtgagcgtagccagtgagctgagacgacccgtctaccga
ggtgtggcatcaagatgcatcttgttcgagcggatgcttcaacttatggccacggtcaag
tgggatattaaagacattatgtcacaacacagcacctatgtggacgtcctccttcaggat
tttatgatattcaatacaagactggatgaagtcggcaggcgagtatccattccaagtcca
gtctacaacatcttatggggtcatcttgtacggctagctaaccgcacatacgttgaaggg
tttgccagcgctaagaagtgtagcaatgaaggaagggcgttgatgcagctggacttccaa
caatttctactcaagctggacaagcttactgacgtcagaccaattccagacaaggagttt
gttgagacgtacgtgaaggcatactacttatcagagtcagacatggagcagtggattaaa
gatcatagggagtattcagccaagcagttattgagtctcgtcaactgcgccataagctcc
aagaaagctcggcaacgactgacgggcatcgttgaagaattggagcgcacccgtggaagg
tga
DBGET
integrated database retrieval system
