Asterias amurensis (Northern Pacific seastar): 139948917
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Entry
139948917 CDS
T10870
Name
(RefSeq) ATP-binding cassette sub-family F member 2-like isoform X1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamu03009
]
139948917
Ribosome biogenesis [BR:
aamu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
139948917
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
AAA
RsgA_GTPase
VapE-like_dom
AAA_28
AAA_18
AAA_24
MMR_HSR1
AAA_23
AAA_22
AAA_33
NACHT
TsaE
AAA_25
DUF4936
DUF87
AAA_30
Motif
Other DBs
NCBI-GeneID:
139948917
NCBI-ProteinID:
XP_071803383
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All DBs
Position
16:complement(16638596..16652907)
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AA seq
705 aa
AA seq
DB search
MSLRQNDHRTGKKVVSPPLLVSTVSQFTVEARARLQLLRHPCSLARQYRRFDPHIPIFED
IFLCLKQLIFIMPKKRAPPGKRRGSAAQNDKPATNGKAENGTAKVTGLIDEMDSLDLATD
ARACTGVLSSHPSSRDIKIDNYSLTFHGAELFSDTNVELTCGKRYGLIGPNGCGKSSFLS
SLGQREVPIPDHVDIFHLKREIAASDKTALECVMEVDEMRVRLEREAEELSAMEGQEAED
TLMEIYERLDELDSDQVEVKAARILHGLGFTSSMMQTKTRDFSGGWRMRISLARALFVKP
HLLLLDEPTNHLDLEACVWLEEELKHYERVLILISHSQDFLNGVCTNIIHMHLGKLNYYS
GNYDSFVKTRTELEENQMKKYKWEQDQIQHMKDYIARFGHGSAKLARQAQSKEKTLSKMV
AAGLTEKVEDDKTVSFYFPSCNKIPPPVIMVQNVSFKYADDKPHIYKNLEFGLDLDSRIA
LVGPNGAGKSTLLKLIAGELVATDGLIRKNTHLRIGRYHQHLQDLLDLDLSALDWMMKNF
PDIKDIEAMRRIIGRYGLSGKQQICKIGNLSDGQRCRCIFAWLASQNPHMLLLDEPTNHL
DIETIDALASAINEFEGGLVLVSHDFRLINQVAEEIWVCEKQTVTKWTGDISSYKQTLKK
LILKDDVKTVKAQKGPKPGATKNGKTTNGKTNGVIKNGITKNGKK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaggcagaacgatcatcgcacgggaaaaaaagtcgtatccccgcctcttctc
gtttccactgtcagccagttcactgtggaggcgcgtgccagactacagctattgcgacat
ccttgttccttggcgcgacagtaccggcgttttgatccgcatattccaattttcgaagac
atatttttgtgtttgaaacaactgatcttcatcatgcctaagaagagagctcccccaggc
aaaagacgaggaagtgctgcacaaaatgacaaacctgcgacaaatggcaaagcagagaat
ggaacagctaaagttactggcctgattgatgagatggactccctggacttagcgactgac
gctcgtgcctgtaccggtgtcctctcctcacatcctagcagtcgagacatcaagatcgac
aactactccttaacgtttcatggtgctgagctcttctcagataccaatgtggagttgacg
tgcggaaaacgctacgggttgattggtccaaatggttgtggtaaatcctcatttctatca
tcattgggtcaacgagaagttccaattccagaccacgttgatatatttcacttaaagaga
gagattgcggcatcagataagactgccttggagtgtgttatggaagtagatgagatgaga
gtacgtctagagagagaagccgaagaattgtccgcaatggaaggacaagaggcagaagat
actctgatggagatttatgaacgtctcgacgagctcgactcggaccaagtagaagtcaaa
gccgcccgtatactccacggtctgggcttcacaagctccatgatgcaaaccaaaactagg
gacttctccggaggttggcgcatgcgtatttcgctggcgagggcgctgttcgtcaaaccc
catctcctgcttctagacgagccgacaaatcatctcgatcttgaagcgtgtgtatggtta
gaagaagagttgaaacactacgagagagttttaattcttatatcccactctcaggacttt
ctcaacggtgtgtgtacaaatataatccatatgcatctaggtaaactcaactactacagt
ggtaactacgactcattcgtcaaaaccagaactgagttggaggaaaatcagatgaagaaa
tataaatgggaacaagaccagatccaacacatgaaggactatatagcgaggtttggtcac
ggtagcgctaagctcgccagacaagctcaaagtaaagagaaaacactaagcaagatggtg
gctgcaggactaactgagaaagtggaagacgacaagacggtgtctttctactttccgtct
tgcaacaagattccacctccagtaatcatggttcagaatgtctccttcaagtatgctgat
gataagcctcatatatacaagaatctcgagttcggtctggacttggacagtaggatagct
ctcgttggacccaacggtgccggcaaatccactttactcaagctcattgctggagaactc
gtagccactgacggacttatacgaaagaatactcatttacgtataggcagatatcaccag
catcttcaagatcttctcgatttggatcttagtgccttagattggatgatgaagaacttc
cctgatattaaagatattgaagccatgagaagaattataggacgttatggtctttctgga
aaacaacagatttgcaagattgggaatctctccgatggtcaacgttgtcgttgcatcttc
gcttggctggcctctcagaacccacacatgctgttacttgacgaacctacaaaccatttg
gatatagaaactatcgatgcacttgccagcgccatcaatgaattcgagggaggcttggtc
ttagttagccacgactttagattaatcaatcaagttgctgaagagatttgggtgtgtgag
aaacagactgtcacaaagtggactggagacatttcatcttacaagcaaactctaaagaaa
ctcattctgaaagacgatgtcaaaactgttaaggctcaaaaaggacccaaacctggagca
actaaaaatggaaagactacaaatggaaagacaaatggagtgatcaaaaacggcatcacc
aagaatggaaaaaagtag
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