Asterias amurensis (Northern Pacific seastar): 139949081
Help
Entry
139949081 CDS
T10870
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139949081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139949081
04121 Ubiquitin system [BR:
aamu04121
]
139949081
03036 Chromosome and associated proteins [BR:
aamu03036
]
139949081
03400 DNA repair and recombination proteins [BR:
aamu03400
]
139949081
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
139949081
Ubiquitin system [BR:
aamu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
139949081
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
139949081
DNA repair and recombination proteins [BR:
aamu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
139949081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
zf-RING_6
Ank_4
BRCT
BRCT_2
zf-RING_5
RTT107_BRCT_5
zf-RING_10
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
Prok-RING_4
PTCB-BRCT
zf-RING_UBOX
zf-RING_2
ANK_LRRK2
TraK_C
Motif
Other DBs
NCBI-GeneID:
139949081
NCBI-ProteinID:
XP_071803585
LinkDB
All DBs
Position
16:10267336..10280096
Genome browser
AA seq
975 aa
AA seq
DB search
MEVCDWNCTKEALKGLERSLGCGVCNNPLQEPCTLGSCDHLFCRTCTKAHLGNSCPICQA
PAWVKDLQLKRELASVVTLYGKLRSIINKDPSDEVRDVGKVNETAGRNEAKVQKVTTEVV
LEGRGIPRKALHPRNVSEKETAPSAAGKRKLIKKPSKEVVNGKKRRQPKEQDEIMQENEK
NKLLSGSSSSSENDVIDPMSVFDFIPSPRQPKPVRKRVRKPNPKALKRKRIAAANRKWQK
SHKGGPSKEVRGSDLESSLRHVSFSIETDRSQMSSCPDSSSLESMDITSQDEDQSQLVVK
SDGSKTIEEAPGSTQESGYSTGSYKDTLSLEGESQPSARNTDECPSELQNDTPSCDPSSN
LDDHCPPVQQHLKENSRRSQRNSKCSSTIPQDDSCAEGLKVRNGGRGKTTLKEQKTASRK
TRSVIDNSDRLPAGEETSNVDATPTVMTDPSVTGSILPERRLTRQNKPTSSLSIEGSIIS
AKDNPPARQTISRSSSMASKNVEQKDSAIPPITKHCSLKETGLPSEGSARNNPSAEVADK
PQIKSRSMKGDSGKTSSNTPTSRRKVDEGGLLKEAAEGNLGEKGTPSNSEKPYRSSTSPR
SGSAVKRNKRGETPLHVAVIKGDVATARLLLQEGADPNSMDNARWTPLHEACNHGHTALV
ALLLDHGALINTPGFEHDSPLHDAVMNHRLDVVKLLLKRGASLDVRNMHGLTPADYAKSV
PMRAALKTQPLVNSVTKTTTPTSKAPAFSRQRPVVLLGTGLNDSQRKRLQACAKLLGNGR
VVSEFGSEVTHLVASCNHDNLCMRTMKYLNAVLSGIWVVSFNWITECLRIKGQAEEVKFE
VKGTTTLSNSPGAQRGRQNAEQQLPGLLDGCHFYLQSTFSPPTPSKKEIVQLIKNGSGTL
LSRQPKPDDDVIQASTTVPYHARLGSELSTCSYFIIHDHVDSRAPPRIRTGKLCTAPICW
LMDCISQFELVDLPK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctgcgattggaattgtacaaaggaagctcttaaaggcctcgaaaggtcatta
ggatgtggagtttgtaataaccctcttcaggaaccgtgtacccttggatcatgtgatcat
ctcttttgcaggacgtgtactaaagcccatttaggaaactcatgtcccatttgtcaagcc
ccggcctgggttaaagacctgcaactgaaacgagagcttgcaagcgtcgttacactctac
ggcaagctacgctccatcattaacaaagatccttctgatgaagttcgagatgttggaaag
gtcaatgagacagctggtcgaaatgaggccaaagttcaaaaggtcaccactgaggtcgtt
ctggaggggcggggcattccaaggaaagcgttacatcccaggaatgtttcggagaaggaa
acagcgccctcagctgccggtaaaaggaaattgatcaagaaaccatccaaagaagtagtc
aacgggaagaagagaaggcaacctaaggagcaggatgagatcatgcaggaaaatgagaag
aacaaactactgtcaggctcttccagcagcagcgagaacgatgtgatcgacccgatgtcg
gtgtttgacttcatcccctcgccacgccagccgaaacccgtgaggaaacgagtgagaaaa
cccaaccctaaggcgctgaagagaaagcgtatcgccgcagccaatcgcaagtggcagaag
agtcacaagggtgggccgtccaaagaagtcagggggtctgatttagagagttccctgcgg
cacgtctcgttctccattgagaccgaccgtagccagatgtcgtcttgtcccgattcaagc
agcctggagagcatggacatcacttctcaagatgaggatcagagccaattggtcgtcaaa
agcgacggttctaagacaatagaggaggcccctggaagcacccaggagagtggatacagc
actggcagttataaggataccctaagccttgaaggagaaagtcaaccgtccgccagaaat
acagatgagtgtccgtcagaacttcagaacgacacgccatcttgcgatccatctagcaat
cttgatgaccactgtcctccagtgcagcagcatctcaaggaaaattcaagaaggagtcag
agaaattcaaaatgttcatctacgattccccaggatgatagttgtgccgaaggactcaag
gtgagaaatggtggaagaggtaaaaccacattaaaggaacagaagactgcttccagaaaa
acacgttcagttattgacaattctgataggttaccagctggagaagagactagcaatgtt
gatgcgacccccacagtgatgacagatccatctgtcactggtagtattctacctgaaaga
agactaaccagacaaaataagccaacctcttctctctcgatcgaaggaagcattatatca
gccaaggacaaccctccggcacgccaaacaattagtcgatcatcaagtatggcttctaag
aatgtcgaacagaaagactctgccatacctccaataacaaagcattgttcactcaaagaa
actggtttaccttcagaaggctctgcgagaaataacccgtcggctgaagttgccgacaaa
ccacaaataaaatcacgctcaatgaaaggagactcgggaaagacgtcctcaaacacgcct
acatcacggagaaaggttgacgaaggaggtctcctcaaggaggcagcggaaggcaacctt
ggagagaagggaactccaagcaactctgagaagccttacaggtcctcgacatcaccaaga
agtggtagtgctgtcaaaagaaacaagcgtggagagacacctctacatgttgctgtaatc
aagggagatgtggccacagcaaggctacttctgcaggaaggcgctgatcctaactctatg
gacaatgccagatggacgcctttgcacgaggcttgtaatcacgggcatacagccctcgtt
gcacttctcctggaccatggagctctgatcaacacccctgggtttgagcatgactccccc
ctccacgatgctgtgatgaatcacagactggacgttgttaagttactcctaaagcgaggt
gcctcactcgatgtcagaaacatgcacgggctgaccccagccgactatgccaaatctgtg
ccaatgagggcagcattgaagacgcagcctctcgtcaactcagttaccaagacaacaact
cccacgtccaaggcgcctgctttttcacggcaacgaccagtggtccttttaggcaccggt
ctgaacgactcccagagaaaacgcctccaagcttgtgccaagctcctcgggaatgggcgt
gttgtcagcgagttcgggtcggaggtcacccatcttgtagcctcttgtaaccatgacaac
ttgtgcatgagaaccatgaagtatctgaatgctgtcttaagtggcatctgggttgtttct
tttaactggataacagagtgtcttcgtatcaaagggcaggctgaagaggtgaagtttgaa
gtgaaaggcacaacaaccttgtccaacagtcctggagctcagagaggcaggcagaatgcc
gagcagcagctccctggtcttttggacggctgccacttttacctccagagcaccttcagt
cccccgaccccctccaagaaagagatcgttcaactgatcaaaaacggcagtggtaccctc
cttagccggcaaccgaaacctgacgatgatgttatacaggcctctacaaccgtcccgtat
cacgcccggttgggctccgaactttccacgtgttcatattttatcatccacgatcatgta
gatagtagggcgccccctaggatcaggactgggaagctgtgcacggcgccgatatgttgg
ctaatggattgcatatctcagtttgaacttgtggatttgccaaagtaa
DBGET
integrated database retrieval system
