Asterias amurensis (Northern Pacific seastar): 139949106
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Entry
139949106 CDS
T10870
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04145
Phagosome
aamu04512
ECM-receptor interaction
aamu04820
Cytoskeleton in muscle cells
aamu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
139949106
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139949106
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139949106
09142 Cell motility
04820 Cytoskeleton in muscle cells
139949106
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139949106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139949106
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamu04147
]
139949106
04515 Cell adhesion molecules [BR:
aamu04515
]
139949106
04090 CD molecules [BR:
aamu04090
]
139949106
Membrane trafficking [BR:
aamu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
139949106
Exosome [BR:
aamu04147
]
Exosomal proteins
Proteins found in most exosomes
139949106
Cell adhesion molecules [BR:
aamu04515
]
Integrins
Integrin beta subunits
139949106
CD molecules [BR:
aamu04090
]
Proteins
139949106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
139949106
NCBI-ProteinID:
XP_071803612
LinkDB
All DBs
Position
16:11741201..11771048
Genome browser
AA seq
828 aa
AA seq
DB search
MGGHTLQRQHRFSAVVAFVLLSTQCCSQVTETVPSEPSELEDNVCSGGRTCGDCTAIDPT
CGWCAQQGYTEETGFLRCDLLQNLINKTCLDITYPVSSVSIEENEELRDADPVLGDPIQV
APQKIRLKLRPGQSVNLSVSVRQARDYPVDLYYVMDLSKSMTDDLENLKKLAKILALEVG
EITRNFRLGFGSFVEKVLSPFVNTSPSRLMAPCSGCEPPYSFINHLPLNVNTTLFSKKVN
ETSISGNLDAPEAGLDALMQITVCKELIGWLPKARHIVVFLTDAAFHVAGDGKLLGIVNP
NDGECHLNSETGFNDRANDFDYPSVGHLNFRMREQNVIPIFAVTEDQYCIYQELASSIEG
STVGVLASDSSNVVDLIKENYAKITAKVQISDNAPENLAVTYTSRCLNEAPNPGSKVCLG
LKLGEVVSFDVTVEATSCHDNTEQSFNIGPIGFEEALEISVEVICSCECEDLSIPNSDFC
SNGNGTMSCGQCVCDAGRYGKLCECSSGEDIEVSFRDKYENVASCRASSNSSIACSGRGE
CMCGECACFERPDKKEVISGRFCECDNFSCERYKGQLCGGPDRGQCVCDEKSRRSVCKCQ
PGFSGDACDCSMSTAGCVASNGLMCNANGVCECNRCKCDANSPFKGSTCETCKTCIGKCS
SYRPCVECKIFGSDVISPEECDKCTVTVVIDSKLPNANVSNLCVFPGGFTNCSTSYNFVY
ETLGNGTVLVHLQDQPRECDPNGGGDGKTPIVVEPTSVDILILVLSIVGAIVLIGIILII
LLRLATHLHDKREYTQFKKEQQSAVWDETQNPIFKPSTSTFVNPAYAK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgggtggccatactctgcaaagacaacatcggttttccgctgttgtagctttcgttctt
ctatcaacacagtgttgctcacaagtcactgaaacagtacccagtgagccgtcggaattg
gaagataatgtatgctctggagggcggacttgcggggactgtactgccattgatcccaca
tgtggctggtgtgcacaacagggttatactgaagagaccggcttcctaagatgtgatcta
cttcagaacttaatcaacaaaacttgtctcgatattacctacccagtcagcagtgttagc
atagaagagaacgaagagctaagagatgcagatccagttctaggcgatcccatccaagtt
gcaccccagaaaatcagactgaaactacgacctggtcaaagtgttaatctgagtgtatct
gtgcgtcaggcaagggattacccggtggacctctattacgtcatggatttaagcaagtcc
atgacggatgatttagaaaaccttaagaagttagccaagatactagcactggaggtaggg
gaaattacgagaaattttcgacttggttttggctccttcgtcgagaaagtactatcaccc
tttgtaaatacatcccctagtcgccttatggcaccgtgctcaggttgcgagccgccttac
agcttcataaaccatcttccattgaacgtgaacacaaccttgttttcgaaaaaagtaaac
gagacctcaatctctggaaacctggatgctcccgaggccggactggacgcccttatgcag
atcacagtatgcaaagaattgataggttggctgcccaaagcaagacacatcgttgttttc
cttaccgacgccgcgttccacgttgctggcgacggaaagttactagggattgtgaatcca
aatgatggagaatgtcacctaaatagtgagacgggctttaacgacagggccaacgatttt
gattatccgtccgttgggcatttgaacttccgcatgagagagcagaatgttattcctatt
ttcgcggtaacagaggaccagtattgcatttaccaggaactcgcaagttccatcgaggga
tcaacggttggtgtcttggcctctgactcgtctaacgtggttgacttgatcaaggaaaat
tacgctaaaatcaccgcaaaggttcaaatctccgacaatgctccggaaaacctagccgtt
acctacacgtctcgctgtctgaacgaggcgccaaaccccgggtcgaaagtctgccttggt
ctcaagctaggtgaggttgtcagctttgacgtcacggtggaggctaccagttgccatgac
aatactgagcaaagtttcaacatcggaccgattggttttgaagaagctttagagatctca
gtagaagtgatatgcagctgtgaatgtgaagatctgtcgattcccaacagcgacttttgt
tccaatggaaacggtacgatgtcttgcgggcagtgcgtgtgtgacgcagggcgttacggt
aaactctgtgagtgtagcagcggtgaagacatcgaggtatcattcagagacaagtatgag
aacgtggcatcgtgcagagcgagcagtaactcgtccattgcgtgttctggacgaggtgaa
tgtatgtgcggggaatgtgcttgctttgaaagaccggacaagaaagaggtgatatccgga
cggttctgtgagtgtgataacttctcgtgtgagcggtacaaagggcaactatgtggaggg
ccagaccgaggccagtgtgtatgcgatgaaaagagcagacgcagtgtttgtaaatgccaa
ccaggcttcagtggtgacgcatgcgactgctccatgtcaaccgctggatgtgtggcttca
aacgggctgatgtgtaacgccaacggggtgtgtgaatgcaaccgctgcaaatgcgatgca
aactcgccatttaaaggttccacgtgtgaaacatgcaagacctgcatcggtaaatgttct
tcttaccgcccctgtgtggagtgtaaaatcttcggtagcgatgtcatctcgccggaggaa
tgcgacaagtgcacggtgaccgttgtcattgacagcaagctgcccaatgcgaatgtgtcc
aatctatgcgtgtttcccggtggcttcaccaactgttcaacatcctacaattttgtttat
gagaccctgggcaacggtactgtgttggttcacctacaagaccaaccaagagagtgtgat
cctaacgggggcggggacggtaaaacacccattgtggtagagcctacgtcagtggacatt
ctcatcctcgttctcagcatcgtgggagccatcgttctcatagggataattctcattatt
ctgttgagactcgctacgcatctgcacgacaagagagagtatacacagtttaagaaagag
caacaatcggcagtctgggatgagactcaaaatccaatcttcaagccctctacgtcgact
tttgtcaacccagcctatgcaaaataa
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integrated database retrieval system
