Asterias amurensis (Northern Pacific seastar): 139949725
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Entry
139949725 CDS
T10870
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139949725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139949725
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
139949725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
139949725
NCBI-ProteinID:
XP_071804331
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All DBs
Position
17:8749637..8778567
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AA seq
293 aa
AA seq
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MPIDSKRIPGPEETFSPDLYSKTTIKKKLLQENGQRSDGRTLEEIRPIFLKAGVVSQARG
SAYIEARNTKVICAVYGPHEVQRREGFSMQGTLRCEFKYATFACHSRRQHQKDNEEKQLG
LVIQQALQPAICLHKFPKSQLDIFVTVLQNDGSALSAALTCASVAVADAGIEMYDVIVGC
ALRQAGVETSMLDPTTSEEFRSRLDPDETVNTAVNHGSVTVAYLPSLNQLSAVQQTGELD
HEVAVQCLKKCIEGCVGMFPVVNQCLIRAVKRKSQKAKQMAEKQQTTSMDEST
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccgatagattcgaagcgtattcctggtccagaagaaaccttttcacctgatctttat
agtaaaacgacaataaagaagaagctgcttcaagaaaatgggcagagatctgacggcaga
actctggaagagattcgaccaatttttctcaaagctggcgtcgtaagtcaagcgcgaggc
tccgcctacattgaggcccgcaacaccaaggtgatatgcgcagtctacggcccccatgag
gtgcagaggagggagggcttcagcatgcagggaaccctacgctgcgagttcaagtacgca
acatttgcctgtcacagtcggagacagcatcagaaggataacgaggagaaacagctgggt
ttggtcatacagcaagcgttacaacctgctatttgtctgcacaagtttccaaagtctcaa
ctggacatttttgtgacggttcttcaaaatgatggcagtgcactctcggcagctttaacg
tgtgcctcagtcgctgttgcagatgctgggattgagatgtatgacgtcattgtcgggtgt
gcattgcgacaggcaggtgttgaaacctcgatgttggaccctaccacgagcgaggagttc
cgaagccgtctagacccagacgagaccgttaacactgccgtcaaccacggctcggtcacg
gtagcttatctaccatccctcaaccaactatctgccgtacaacagacgggagaattagac
cacgaggtcgctgtgcagtgtctaaagaagtgtatcgagggttgcgtgggaatgttcccc
gtcgtgaaccagtgtctgatcagggcagtcaaaaggaaatcacagaaagccaaacagatg
gcagagaaacaacagactacatccatggacgaaagtacatag
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