Asterias amurensis (Northern Pacific seastar): 139949954
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Entry
139949954 CDS
T10870
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu00100
Steroid biosynthesis
aamu01100
Metabolic pathways
Module
aamu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
139949954
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aamu01006
]
139949954
Enzymes [BR:
aamu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
139949954
Prenyltransferases [BR:
aamu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
139949954
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
139949954
NCBI-ProteinID:
XP_071804645
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All DBs
Position
17:13552125..13567137
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AA seq
409 aa
AA seq
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MDLLKSITHPDEVLALLKYKIGGGPTKSKQNLASLSSTARTCYEYLNLTSRSFAAVIQAL
DGELRHAVCIFYLVLRALDTVEDDMTIPLKEKIPMLQTFYKNLEDTTWTYTKSNEKDRIV
LEDFQSIAHEFRSLSKCYRVVISDITDKMGNGMCEFAQRDVVTNKDWDLYCHYVAGLVGI
GLSRLFSASHLEDAIVGEDTYLANSMGLFLQKTNIIRDYLEDSLEGREFWPKETWSKYTS
ELKNFQKRENLSSSLQCLNELVTNALHHVPDVLKYMSRLHNQSVFNFCAIPQVMAIATLA
ECYNNPDVFSRVVKIRKGQAVSMMMEATSMASIRSIIHHHTQQIGRSIPSKDSSAELTRK
IVEINLNLSRSSEQLATHSLYPPLYVSLAIMVVMISYSYGTQILHYLNL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctgaaatctataacccatcctgatgaggtgcttgcgctgctcaagtacaag
attggcggtggtcccacaaaatctaaacagaacttggcatcgctgagcagtacagccagg
acatgttatgaataccttaatctgaccagcagaagtttcgctgcagtcatacaggcatta
gatggagagcttaggcacgcggtctgcatcttctacctggtcctgcgagccttggacaca
gtggaagatgacatgaccatccctcttaaggagaagatcccaatgttgcagacattctac
aagaatcttgaagacacaacgtggacctacacaaagagcaatgagaaggatcgtatcgtc
ttggaagactttcagtcgattgctcatgagtttcgaagtctttccaagtgctatcgtgtt
gtgatatcagacatcactgataagatgggcaatggtatgtgtgagtttgctcagcgagac
gttgtgacgaataaggactgggatctgtactgccactatgtagctggtctggttggtatt
ggtctctctcgactcttctcagcctctcatcttgaagatgccatcgttggtgaagacacg
tatctcgctaactccatgggactcttccttcagaagacaaacatcatcagagattatctc
gaagatagtctagaaggaagagagttttggccaaaagagacatggagtaaatacacgagt
gaactgaagaacttccagaagcgagaaaacctatcgtcctccttacagtgcctgaatgaa
ctcgtcaccaacgctctgcatcacgttcctgacgtcttgaaatacatgtctaggcttcat
aaccagagcgtcttcaacttctgtgcaattcctcaggtgatggccatagctacattagct
gagtgttacaacaatcctgatgtattctctcgagtggtcaagattcgtaagggtcaagcg
gtcagcatgatgatggaagcaacgagtatggccagcatcaggtccatcatccatcaccac
acccaacagattggcaggtcaataccctctaaggattcctccgctgagttaacgagaaag
attgttgaaatcaacttgaacttgagtcgatcttcagagcagttagcgacgcacagtttg
tatcctccgctatatgtttccttggccatcatggttgttatgatcagctatagttatggc
actcagatacttcattatctcaatttataa
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