Asterias amurensis (Northern Pacific seastar): 139950257
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Entry
139950257 CDS
T10870
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139950257
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
Tropomyosin
Fez1
AAA_lid_2
F5_F8_type_C
Mac
Lipoprotein_7
DUF2209
Motif
Other DBs
NCBI-GeneID:
139950257
NCBI-ProteinID:
XP_071804978
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All DBs
Position
2:456547..507343
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AA seq
1775 aa
AA seq
DB search
MHDWYRLCVLLLTLVSAVVGQTNQALSCEEGSCYTGNLLVGRENRLSATSTCGMESVERY
CIVSHLQDVKKCFDCDSRTPYQKGLNTYSHRIENIVTTFQGADRKKMWWQSANGQQTVSV
RFDLEAIFHFTHLIMTFKTFRPRALIIERSADFGRTWSVYRYFAYDCEDSFPGISQGPLF
NINDVICESRYSAVEPSTEGEVIFRVLPPNIRIDNPYSNDVQDMIKITNLRINFTELHTL
GDIELDNRQEIREKYYYAMYDMVVRGSCHCYGHATSCVPAEGVTFKEGMVQGKCLCGHNT
EGNNCERCQEFYNDQPWRPATHNQPNECKRCNCNSHTNRCHFDQAVFEITNGASGGVCDD
CQHNTMGRNCEQCKPFFYMNPDRDIRDPNICVPCDCDPYGSENGGECESHTDPSNNLIAG
RCMCKRFTTGVRCDICQDGYWNLRSENPDGCQACTCNTLGTEGNRGCNKQTGNCVCKRYV
TGRNCDQCYEGYYGLSEEPYGCNYCNCDPGGSYNSSCNRDSGQCYCRPHISGRQCNQVES
GYFYSFMDYFLYEAELSRVLTPSLVMVETRVRDDSSYISWTGSGFLRITEGGQIQIIVDN
IPVSGDYEIVLRYEPLVAGAWEDVRVSLTRQGNIPTQSVCGNTIPQDDLLATSLPSGNRH
RLLASTFCLERGKVYTIDVDFNSFGGGGGGGGQNVNTDILLDSFVLIPRITNFNMFSGSD
SIKQNRRDQWEYYRCGEAHVSAIHAPLSDICRELMFSMSAMMFDGAVDCECDPIGSISSI
CDEFGGQCECRPNIIGRRCDQCAPGTYGFGPSGCSVCECDSRGSLDGFCDPINGQCSCIP
NTYGRACDLCAPGFWNFPNCIRCDCNYHAPTCDSRTGECIDCQDATMGPNCERCQDGFYG
EPTIEANLPCQPCMCPGGEGSGHQFADTCYIDQSIQTVVCICEEGYTGIRCDQCDNNYFG
YPSVPGGRCSLCNCNGNTNPLTPGNCDATTGECRLCLYDTGGFSCDECAPNFYGDALLRN
CRSCQCNILGTDLSVCDLNNNCGICNRESGECPCHPNVLGRTCDQCAPDHWKLASGAGCE
ACNCCVYGSLRSQCNEFTGQCECRAGFGGRTCCECESLFFGDPLEGCERCECDPQGSESM
QCNNDGTCNCRPGVTGRNCDSCAYGTTGEVPNCEPCGECFDDWDAIIEDLRRQTKELIAR
ANNITVILPPSLYEEEFKRINMKLSEVQDLLTGPSVTMDDLDTLLDNIAQIRADLDDYDK
KLDTVDKDLQDTQVENFQATEELKRLQREAQALEEEAERLKAAVVNYTDGNIEGANKSIH
ESRIKSQAAQDKVDGAVGLVDQSSGIRAEVESIIRQRERDLAQKQQQYQDELQQVDNQLT
GLEARLGELNQQVCGGSGETCNAGCGGAGCGYCGGLGCSGSISVSDEALNRASQANDRFM
QKKEQADGMLTDMEGVHAQTMDALDLAKMAYDAALMARDEAEGAQTNLTGLLQAITDFIE
KKKVTPAEIQQVAQMALETRISLTPEEIRDLAKQIEDTVATLENIDKILEDTTDDLKNVL
ALKDRADKAREFADEVLASAETVVAALDEAEVAQQTAMEAIDEATGNINDANDNLVQIES
EAEAAIDKTGQIEVKLDQMEAQLVRVQGKFTDNEENIREAMDFANMADADADKALEAVAE
LDVKFNQTFDQAMSKAMEASNARTKAEGLKDEAVAFQQKVTEQLNNLKRMQGVFNQNEAT
MTDLSDEINLLNMRMMDLLAKIQTKAEYYRTCQGN
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactggtacagattatgtgtgctgctgctgacacttgtgtcagctgtggtaggg
cagacgaaccaagccctttcctgcgaggaaggtagctgctacacaggaaacctcctggtt
ggtcgcgaaaacagactttctgcaacgtctacctgcggtatggagagcgtggagcgctat
tgcatcgtcagtcaccttcaggatgttaaaaaatgttttgactgtgactcacggacaccg
taccagaagggcttgaacacgtacagccaccgaatcgagaacattgtcaccacgttccaa
ggagctgatcgtaagaagatgtggtggcagtcggccaacggacagcagacagtctccgta
cgcttcgacctggaagctatttttcacttcactcatcttattatgacctttaagaccttc
agaccccgggctctcataattgaacgctcagctgatttcggaaggacgtggagtgtctat
cgatactttgcgtacgactgtgaggattcgttccctggtatctcgcaggggcctctgttc
aatatcaatgatgtcatctgtgagagtcggtactctgctgtagaaccttcaactgaggga
gaggtcatcttccgcgttctcccaccaaacatccgcattgacaacccatacagcaacgat
gtgcaagacatgatcaagatcaccaatctgcgcatcaacttcacagagctacacactcta
ggggacattgagctggataatcggcaagagatccgagagaaatattactatgctatgtat
gatatggtggtgagaggaagttgccattgttatggacacgctactagctgtgtaccggct
gagggagttaccttcaaggaaggcatggtccaaggaaagtgcctgtgtggtcacaacact
gaaggcaacaactgcgagagatgtcaggaattttacaacgaccaaccctggagacctgct
acacacaaccaacccaatgaatgtaaaagatgtaactgcaacagtcacaccaatcgttgc
cattttgaccaggcggtctttgagatcactaatggtgctagtggaggggtctgcgatgac
tgccagcataacaccatgggtagaaactgtgagcagtgcaagccattcttctacatgaat
ccagacagagatatccgagatcccaacatatgcgtcccatgcgactgtgacccatacggt
tctgaaaatggcggagaatgtgaaagccacaccgacccatctaataatctgattgctggc
cgctgcatgtgcaaacgatttacaacaggagtaagatgtgacatttgtcaagatggctac
tggaatctaagatctgaaaaccctgatggttgtcaagcctgtacatgcaacactctaggt
actgagggtaaccgaggctgtaacaaacaaactggtaactgtgtatgcaaacgttacgtc
accggcagaaactgtgaccagtgttacgaaggctactatgggctgagtgaggaaccatac
ggctgcaattactgtaattgcgatcctggtggctcatataacagcagctgtaaccgagat
tctggccagtgctattgccgtccacacattagcggcagacagtgcaaccaagtagagtct
ggatatttctattccttcatggattacttcttgtatgaagctgagttgtcgcgagtcttg
acaccatcgttggtgatggttgagaccagagtgcgtgatgacagctcttacatcagctgg
actggttctggatttctacgcatcacagagggaggtcagattcagatcattgttgacaac
atcccagtatctggagattatgaaatagttctacgctatgaaccattggttgctggagca
tgggaggatgtccgagtaagtctgacccgtcaaggcaatatcccaactcagagtgtttgt
ggtaataccatcccacaagacgacctcttagcgactagtctaccctctggaaacaggcac
cgtttgcttgcatcaacattctgtcttgagagagggaaagtgtacaccatcgacgttgac
ttcaatagctttggaggaggaggtggaggaggaggccagaatgttaacacagacatccta
ctggactcttttgtgctaattccacggatcaccaacttcaacatgttcagtggatccgac
agtattaaacagaaccgtcgtgaccagtgggagtattatcgctgtggagaggcccacgtc
tccgctatccatgctccactctctgatatctgtagagagctcatgtttagtatgtctgct
atgatgtttgatggtgcagtggattgtgaatgtgatcccattggttccatcagttcaatc
tgtgatgagtttggtgggcagtgtgaatgcagaccaaatattatcggtcgtcgttgtgac
cagtgtgctccaggaacatatggcttcggacccagtggatgctctgtgtgtgaatgtgat
tcacgcggctctcttgatggtttctgtgacccaatcaacggacagtgttcctgtatacct
aatacctatggccgggcctgtgatctgtgcgcaccaggcttctggaacttccccaactgc
attcgctgcgattgcaactaccacgccccaacatgtgacagcaggactggagagtgtatc
gattgccaagacgctacaatgggacctaactgtgagaggtgccaggatggattctacggt
gagccaactattgaagctaatcttccctgtcagccatgcatgtgtccaggaggtgaagga
agtggtcatcagtttgctgatacatgttacattgatcagagcattcagactgtagtgtgt
atctgtgaagaaggctatactggtattcgttgtgatcaatgcgacaataactactttggt
tatccctcggtacccggtggtagatgtagcctgtgtaattgcaacggtaacactaacccc
ttgacacctggtaactgtgacgctaccaccggggagtgtagactatgtctctatgacact
ggtggctttagctgtgatgagtgtgcgcctaacttctatggagacgctctcctcaggaat
tgcagatcttgccagtgtaacatccttggaactgacctaagcgtctgtgacttgaacaac
aactgtgggatctgcaatcgggagagcggggagtgcccgtgccaccccaatgttcttggc
cgtacctgtgaccagtgtgctcctgatcattggaagcttgccagtggggctggatgtgag
gcttgcaactgctgtgtctatggatctctgcgttcacaatgcaatgagttcactgggcag
tgtgaatgtagagctggattcggcggccgtacctgctgtgaatgtgaaagtctcttcttt
ggagatcccctggagggatgtgaacgatgtgaatgtgacccccagggatctgagtccatg
cagtgcaacaatgacggaacctgtaactgccgccctggtgtgactggaaggaactgtgat
tcctgcgcttacggaacaacaggggaagtgcctaactgtgaaccgtgcggggaatgcttt
gatgattgggatgctatcattgaagaccttagaaggcaaacgaaagaacttatcgcacgt
gctaacaacatcacagttatcctaccaccaagcttatacgaagaggagtttaaaaggatt
aatatgaaacttagcgaagtacaagatttgttgactggacccagcgtaacaatggatgat
ctcgacaccctgctggacaatatcgcccaaatacgtgctgatttggatgactacgacaag
aaactggacactgtggacaaagaccttcaggacacccaggttgagaacttccaagcaacg
gaggaattgaagcgcctccaacgtgaagcccaggcgttagaagaagaagctgagagattg
aaggcagcggtagtcaattatacagatggcaacattgaaggtgcaaacaaaagtattcat
gagagtcgtatcaagtctcaggctgcacaggataaggtggatggagccgtgggattggtg
gatcagtcttcaggtatcagggcagaggtagaaagcatcatcagacagcgtgaacgagac
ctcgctcagaaacaacaacaatatcaagatgaactacaacaggttgataatcaactgact
gggctggaggcaagattgggagaattaaaccagcaggtctgtggaggtagtggtgagacc
tgtaacgctggttgtggtggtgctgggtgtggatactgcggaggtctcggctgttcagga
tctatctcggtatcagacgaagctttaaacagagcatctcaggctaatgatagattcatg
cagaagaaagaacaggcagacggcatgctcactgacatggaaggtgtgcatgcacagacc
atggatgccttggacctggctaagatggcatacgatgctgcactaatggctcgggatgag
gctgaaggagcacagactaatcttaccggtctgctccaagctattactgacttcattgag
aagaagaaggttactccagctgagatccaacaggtcgctcagatggcgctagaaactcgc
atctcactcacaccagaagaaatcagagatctggccaagcagattgaggacactgtagcc
actctagagaacattgataagatcctagaagacaccaccgatgacttgaagaatgtccta
gccctaaaggatagagctgacaaggcaagagagtttgctgatgaggttctagcttcggct
gaaaccgttgtagctgcgttggatgaggcagaggtagctcagcaaaccgctatggaggcc
attgatgaagctactggcaatattaatgacgctaatgataaccttgttcagattgagtct
gaagcggaggcagctattgacaagactggtcagattgaggttaagctggatcagatggag
gctcagcttgttagggtccaaggaaagttcactgataatgaggaaaacatccgagaagca
atggactttgctaatatggctgatgccgatgctgacaaggccttggaggctgtggctgag
ctagatgtcaagtttaaccagacctttgaccaagctatgagtaaagcgatggaagcgagt
aacgctcgaaccaaagcagaaggtctcaaggatgaagctgttgccttccagcagaaggtt
actgagcaactcaacaatcttaaaaggatgcaaggtgtttttaaccagaacgaggcaacg
atgacagacctatcagatgagatcaacttgctgaatatgagaatgatggatcttttggct
aaaattcagactaaagctgagtattaccgaacctgccagggaaactaa
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integrated database retrieval system
