KEGG   Asterias amurensis (Northern Pacific seastar): 139950374
Entry
139950374         CDS       T10870                                 
Name
(RefSeq) DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
aamu  Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aamu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    139950374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aamu03400]
    139950374
Enzymes [BR:aamu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     139950374
DNA repair and recombination proteins [BR:aamu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     139950374
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP zf-CCHH DNA_ligase_A_C BRCT_2 RNA_ligase Permu_RdRp_palm mRNA_cap_enzyme FAM199X BSP_II
Other DBs
NCBI-GeneID: 139950374
NCBI-ProteinID: XP_071805096
LinkDB
Position
18:complement(688883..719199)
AA seq 962 aa
MAENRYAIDYARLGTSKCKKCKQGIAKKDPRIAKLVANPFSEDGGDMKQYHHVKCMFEAL
QRARPSTKKIEEPDDLEGFDVMEDEEKKLVKELIADLATKTQNKAKTPAKKKTTVQSTLS
PAGKVTTPSKSPAATAPSASTSATSSKSSADLTDTDTSHPDNSFREFRKLCARISDQSAY
LSKTREVATFIKKGSSGDGFKGDTYLLLKLLLPGVVKRVYNINSKQLVKVFSQVFGTNLE
EMVEDLDQGDVAETVQKFFDQSEECPPAKKSRLSIHEVDDFLERMAKLTKETEQRVHLTK
IAKRCTGNDLKMVVRLIKHDLRINSGAKHILEALDPNAYEAFQASRDLRDVVDRVNKNKE
ASNGRPGMTKKLSVRASLMTPVLPMLAEACKSVEAAMSKCPNGMFAEIKYDGERVQIHKQ
GDTFQYFSRSLKPVLPHKVTHIKDYLPKACPHGNSIILDSEILMVDKTGKILPFGSLGKH
KRNAFSDANVCLFVFDCLHFNGEDLMDKPMKERRKIMEQNLTPIKNRIMFSESKDVSKAS
ELSSLIMSVIREGLEGLVLKDKMSVYEPGKRHWLKVKKDYLAEGAMADTADLIVLGGYFG
TGSKGGIMSTFLLGVHDPATDKFLTVTKCTGLDDQTMNQVNRDLDVNKISKDASKVPSWL
SVSRTLVPDFVVKDPKKSPVWEIMGAEFTQSESHTAGGISIRFPRVSRFRDDKDWQSANN
LDRLQALYKKSKETSDIPDLISKKTTTPTKITARMHKKKGGASKEEEEEEEEEAVIEDFE
DSDEDEDIKPSPAKKMKLDTNGSSTSSQSKPTCKYGAQCYQTNPQHKAKFSHPGDADSSP
SKKIAPSPSKMTPTKPSASTSVSKPNTSSTQSPSKALPNIFSNVAVYMPKTTPDFYKLKR
YLIAYDGDIVTDFNQANATHFIHDPQAEEPTSTAGKTVVTADWIWQCVKLKKLLPTAKFA
PK
NT seq 2889 nt   +upstreamnt  +downstreamnt
atggccgagaaccgctacgccatcgactatgctcgtttggggacatctaagtgtaagaaa
tgcaaacagggcatcgctaagaaggacccccgcatcgctaagctggttgccaatccgttt
tctgaggatggaggagacatgaaacagtaccaccacgtcaagtgtatgtttgaggcgcta
cagcgggcacggccgtcgacgaagaagatagaggagcccgacgatcttgaagggtttgac
gtgatggaagacgaggaaaagaaattggtcaaggaattgattgcagacctggcaaccaag
acgcaaaacaaagccaaaactcctgccaagaagaagacaacagttcagagtactctctcc
ccagctgggaaggtcaccacaccctccaaaagccccgctgctactgctccttcagccagc
acttcagcgacatcatctaagagctcggcagacttgaccgacacagacacaagtcatcca
gacaactcattccgggagttccgaaaactctgcgcccgaatctccgatcaatcagcttac
ctttccaaaaccagggaggttgcgacgttcatcaagaaaggatcgtctggtgatggattc
aaaggagacacatacctgctgctgaagctgctgttgccgggtgtggtcaaaagagtttac
aacatcaacagtaaacaactcgttaaggtcttcagccaggtctttgggactaatttggag
gagatggtggaagatctggaccaaggagacgtcgctgaaacagttcagaagttctttgat
caaagtgaggaatgccctccagccaagaagagcagactttcaattcatgaggttgatgat
ttcctggagcgaatggctaagttgactaaagagactgagcaacgcgttcatctgacgaaa
atagctaaacgctgcactggcaatgacttgaagatggttgtacgcctcataaaacatgat
ttacgtatcaactctggtgcaaaacacatactagaagccctagatcccaacgcctacgaa
gcgtttcaagcgtcacgtgatcttcgggatgttgtcgaccgcgtcaacaagaacaaggag
gcatccaatgggcgtccggggatgaccaagaagcttagcgtcagggcttcactgatgaca
ccagtgctcccaatgttggctgaggcttgcaagtcagttgaggcggccatgagcaagtgt
cccaatggtatgtttgctgagatcaagtacgatggtgaacgggtacagatacacaaacaa
ggtgacaccttccagtacttcagtcgcagtctgaagccggtcttaccccacaaagttacc
catatcaaggattacctgcccaaggcttgccctcacggaaacagtatcatattagacagt
gagattctgatggttgacaagactggtaagatcttgccatttggatccctcggcaaacac
aagaggaatgccttcagcgatgccaacgtgtgtctcttcgttttcgactgtcttcacttc
aacggagaagacctcatggacaagcctatgaaggagaggagaaaaatcatggagcagaac
ttgaccccgatcaagaaccgaataatgttctccgagtctaaagatgtctcgaaagcaagt
gagttatcgagtttaataatgagcgtcatcagagagggtttggagggcctcgttctcaaa
gacaagatgagtgtttatgagccaggcaagagacattggctgaaggtgaagaaggattac
ctagcagaaggtgcaatggcagacacggctgatcttattgtcttaggaggatacttcggc
accggcagcaaagggggtatcatgtcgacattcctcctgggcgtccacgacccggctact
gacaaattcctgacggtcacaaaatgcactggtctggacgatcagaccatgaatcaagtc
aatcgtgacctggacgtcaataagatcagcaaagatgcatctaaggtaccaagctggctc
agcgtgagcaggactctggtgccggacttcgtggtcaaagatccaaagaaatctccagtg
tgggagatcatgggggcggagtttacccagtcagagagccatacagctggggggatatcc
atccggttcccaagggtcagtcgattcagagacgacaaagactggcagtcggcaaacaac
ctggacagactccaggctctttataagaagtccaaagagacaagcgacataccggatctg
atctccaagaaaaccaccaccccgaccaaaatcacagccaggatgcacaagaagaaaggc
ggggcctcaaaagaagaagaagaagaggaggaggaggaggcggtgatagaggattttgag
gattctgatgaagatgaagacataaaaccaagccctgctaagaaaatgaagttagacact
aacggcagcagtacctcctcccagagcaagccaacttgtaagtacggggcccagtgctat
caaaccaacccccagcacaaagcaaaattcagccaccctggtgacgcggatagctcgccc
agtaagaagatcgctccaagccctagtaagatgactccaaccaaacccagcgcctcaaca
agtgtctctaaaccaaacacgtcaagcacccagagtcctagcaaggctctgcctaacatc
ttctccaatgttgccgtctatatgccgaagacgacaccagatttctacaaactgaagcga
tacctgattgcgtacgatggagacatcgtgacagacttcaaccaagccaatgcaactcat
tttattcatgacccacaagcagaggagccaacgtcgacagctggcaagaccgtggtcaca
gcggactggatctggcaatgcgtcaaactcaaaaagttattgcctactgcaaagtttgcg
cccaaataa

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