Asterias amurensis (Northern Pacific seastar): 139950760
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Entry
139950760 CDS
T10870
Name
(RefSeq) uncharacterized protein isoform X1
KO
K16469
rootletin
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamu03037
]
139950760
Cilium and associated proteins [BR:
aamu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139950760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
139950760
NCBI-ProteinID:
XP_071805655
LinkDB
All DBs
Position
18:4490874..4545316
Genome browser
AA seq
2225 aa
AA seq
DB search
MSENGRRRRHSSLEGSVKSRVDQWEDAIQTGGKISVGNKQDFNNELATLLKKYGHSHRHR
RRHSDSGPVRKLNYHSNSRRPSDFHGVRNLFEVGFDALLEVDEEGINDEEGTSEMMVDKS
CDTEELEQSYKSDAGVEREREEQNRSLVSQNVELRHKLEDEHSNYKRKLQAYQDGQQRQA
QLVQKLQAKVLQYKRKCGELETHLQDRVAESEQHRYSLRSTTDTLQSQLETAEAQLKLRE
EEHSSDLENALLKLEEEQQRSGSLAHVNSILREQLDQASTANQHLTSDISRLTEDLTKSR
DDLEVRENEWRDEEKSFNDYFNNEHSRLLAVWRNVVGFRRGFSEMKTATERDMAQVRAEM
TRSARNLHSACLNLTSNMRTNETSSVVHLEKERSERVQLEQQLRDKVKELLDLQARFDAD
KTELNSRINELTVTNEKHKILLAEKDNQLRTVSSSASVSRVNISASQTQPLESSHTEASL
QQQADDEDNGESLRVLREECEALHTALRDIAQVVIQDADVSGAMEDGTGAGEDQETGFMS
DVTLPSPYARSTPLRRTPSPGRALHLHRSPSPRRAPSPSRRTLSPSRSRSPAFAESTYSA
VQAALQKRQLQVQELKVKLSSNKEQVASLRKHLENGDSDKRHLERSIQGLKDEVETAKRQ
TDDIKRDRDRLRNSLDATGSEKSALENLRRSLNEQIEALNTENERIQAANAELQRQRDNL
EDDRDDRDRDMERQKKEIDRSHKLLEQMEGKNSTLKEDIVSLKEGLNKATLEREVLDQEK
AEIGATLSRAELHKAELEMQLNKVRTDEATLRDALLKMQALNEGLGQDKIELNKIIMQLE
GEKQTLFSEKGHLEHEKSTIKEELVRIESEKMDTETEKMGLDQSLSLVEHTKAQLEDELD
AVNRDKSELQDSFSQVSRQKASLAEELLQSRRMAELQGENVSRIAKEKEELTKDKANLVV
QLTAAERENRSQSEVIAALNSDKDSLETALYELQQTSAKLENRKEQLEAEVQELQLAKEA
ITVDLARVRKEMEIEVTKREKDLDLLKQKLSQVERDSQLAVKQREQMHEEETERLIREKE
TSRLQLEGERDELSHKANQEREELIAKYEQDKEAMEEELGLMQRDRDESLLLAENDKQQA
LSFAQQEKNQLMEKLNNSQRELANASMEMDRLKREAYTKAEQDKDALNASITEVKDLRGF
FEDATEAHEKQIRELTSNIKDLQKAKEAALREVNELKTQLKMVEESRDGVRRELIEAHRK
IREGDETREVMRKENLDIKRQWNDDNREKDSVMKINEELRDKVKKTEAEKTTLNRNVEDR
NQRIAVLDEAKATIQKEAGDLRSSLREVEKSRLEARRELQELRRQIKTLETERAKRVKEI
EDLMARLSAADARDEDNRKDIFTLKQKIVETESTRESIRKDAANLQRRYAELEDELRLRE
KDYQMALEDARNTERKLSEKLRVTETSLEYANGEMGELKLKLSAAEGRINGLEAQLAQVE
GAKRDVEFKLGSLHSALRRTLGIGTGAPPSGSPGSTLRARSPSPMRSRRGRSPGKVTFNL
STGFDNTFTTTTDGRGSPIPRTGSPDRSRSPERSMSPTRLEQLVADIDPETVRISLRDFS
QQLKQTERQRDDSIMKIKSLRQEMSEMDEDRSRIEQRLQQLQKSLGEMEEGKRGADGRLS
SAQTALMLQEETIRRHERERKGMQEKFHTLERSLQSSENEKRSCQDKIAKMKQNEQRLEA
DKRQLREALEGSENRATQLELKRRALEGDLQRLQLSMNDRITENQVCQERIDSLTKQIQD
LESRNSSLQLTVDRMSNALAKSETDETDLKGKLQSLSMSLNDSNVESSQLQEHIQHLQQT
LSQSEHDRRVLQERLDTARHAASESKKQNHQLMERVQQLQNEMSDTELRRMELEAQIRNS
QELLKQRQDSEDNALVQIQRLQAQKQTSQEHIAMLQRAYSNLETEKRELERSTGRLEKDK
TALKKTLDKVEREKIRIDEVAMRVSSEKGALDNSLSTFEQENTELQRQVQALQGSLAETE
QQHAQRLIELTTRHRQETDMETERLRTAQLQSERMLEARERAHRQRVKALEEQVSTVKDQ
LNVEQKKRQQYITRSSKTSDEIQDLRNMLSDSLHTVSRDTALDPVLLEHETRKLDESMGY
GSSYGPGSISGKHRSTRSSSPVRLSAQATSTPAPGRDSKLKSSPRVHDRNASVGLSPVAR
RSLRK
NT seq
6678 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaatgggcgtcgacgtcgtcattcaagtcttgaaggatctgtaaagagtcgg
gtggaccaatgggaagatgctatccaaacgggaggcaagatatcagttggcaacaagcag
gacttcaataatgaactagcgacattacttaagaaatatggtcactctcaccgacatcgc
agacgccattcggattctggtcctgttagaaaactcaactatcattcaaactcgagaaga
ccctccgacttccacggtgttcgtaatttatttgaggttgggtttgatgctcttttggag
gtggatgaggaagggatcaatgatgaggagggtaccagtgaaatgatggtagacaaaagt
tgtgatacggaagagttggagcaatcttataagtctgatgcgggagtggaacgtgaacga
gaggagcagaatagatccttggtttctcagaatgtagagttgaggcataaactcgaggat
gaacattctaactacaaacggaagcttcaggcttatcaagatggacagcagaggcaggct
caacttgttcagaaactacaagcaaaggttttgcagtacaagaggaagtgtggcgagttg
gagactcatctgcaggatcgagttgctgagagtgagcaacacagatactcgttacgtagc
accactgatactcttcagagtcagttagagacggccgaagctcagctcaaactccgagag
gaagaacactcctcagacctggagaatgctctcttgaaacttgaggaagagcaacaaagg
agtggaagtctcgctcatgttaattccatcttgagggaacagcttgaccaagcctctacg
gccaaccaacatctaacctctgacatatctagattgaccgaagacttgaccaagtctcgc
gacgatctggaagtccgggagaacgaatggagagatgaggaaaagtcgttcaacgattac
ttcaacaatgagcatagtcgcttgttagctgtatggcgtaatgtggttgggttcagacgt
ggattcagcgagatgaagactgccacagaacgcgatatggctcaagtgagagctgaaatg
acccgttcagcacgcaacctccactccgcatgcttgaatcttacctccaatatgcgcacc
aatgagacaagctcagtagtccatctagagaaagaacgatctgaacgtgtgcagttggag
caacagcttagagataaggtcaaggaactgctggatctacaagcgaggtttgacgctgat
aagacagagctgaattcaagaatcaatgagttgacagtaaccaatgagaaacataagatc
ctcttagccgagaaggacaatcagctacgtaccgtctctagctcagcgagcgtgagtcga
gtcaacatctcagcctctcaaactcaacctctggagtcgagtcacactgaagcgtccctg
cagcagcaagctgatgatgaggataacggtgaatcgttacgcgtactgcgtgaagagtgt
gaagcgttacatacagcgttacgtgacatcgctcaggttgttatacaggatgcggacgtc
tccggggcgatggaggatggtactggcgctggcgaggatcaagagactgggttcatgtcg
gatgttactcttccatcaccttatgcaagatcaacacctctaaggcgtactccctctcct
ggtcgtgctttacatcttcatcgttctccttctccacgtcgtgcaccatcaccttcaaga
cgtactctctctccatctcgctctcgttcaccagcgtttgccgaatctacttattcagcc
gtccaggctgctctacagaagaggcagcttcaggtccaggagctgaaagtaaagctgagt
tccaacaaggagcaagtagcttccttgagaaagcatcttgagaatggggattcagataag
agacatcttgagcgtagtatccaaggattgaaggatgaagtggagacggcaaaacgccag
accgatgacatcaagagagacagagatcgacttaggaactcactggacgcaactggaagt
gaaaagtcagctcttgagaatctacgtcgatcactgaatgagcagatagaagctttgaac
acagagaatgaaagaatccaagctgcaaacgctgagcttcagagacagcgagataatctt
gaagatgaccgggacgatcgagaccgtgatatggagagacagaagaaagagattgaccga
agtcacaagttgctggagcaaatggaaggcaagaattctactctgaaggaggacatcgtc
agcttgaaggaaggattaaataaagcaacgctggagagagaagttctggatcaagaaaag
gcagaaatcggtgctacattatccagagccgagttacacaaggccgagctggagatgcaa
ttaaacaaagtgaggactgacgaggctactctaagggatgctctgctgaagatgcaagct
ctgaacgaaggacttggtcaagataaaatagaactcaataagatcattatgcagttggaa
ggcgagaagcagactctgttctctgaaaaaggtcatcttgaacacgagaaatcaacgatc
aaagaagagcttgtacgtattgaaagtgaaaagatggataccgagaccgagaagatggga
ctggaccagagtttgagtcttgtcgaacacaccaaagctcaacttgaagatgagttagat
gcagtcaacagagataagtctgaactgcaagacagcttctctcaggtgagtcgccagaag
gcttctctcgctgaagaacttcttcaatccagacgtatggctgaactccaaggagagaat
gtctctagaattgctaaggagaaggaagagttgactaaagacaaagcaaaccttgtggtc
caactcactgctgcggagagggagaatcgatcacagagtgaagtcattgctgccttaaac
agtgataaggatagcctggagacagccttgtatgaactacaacaaacctccgctaaactt
gagaacaggaaagaacagctagaagcagaagtacaggaactccagctggctaaagaagct
atcacagttgatctcgctcgagtccgtaaggagatggagattgaagtcacaaagagggag
aaagatcttgatttattgaagcagaaattatctcaagtggagagggattctcagctggct
gtgaagcagagggaacagatgcatgaggaggagactgagaggctgatccgagaaaaggaa
acatcaagacttcagttggaaggagagcgagacgaactcagccacaaggcaaaccaagaa
cgagaagaattgattgcaaaatatgaacaagataaagaagcaatggaggaggagcttggc
ttgatgcaaagagatagagatgagagcctcctattggctgagaatgataaacaacaggcg
ttgtcgtttgctcaacaagagaagaatcaactgatggagaaattgaacaattctcagcga
gagttggccaacgcttccatggagatggatcgactcaagcgagaagcttacaccaaagct
gaacaagataaggatgctttgaatgcctcgataactgaagtgaaagatttgagaggattc
tttgaagatgctactgaggctcatgagaagcagatccgagaattgacctccaacatcaaa
gatctccagaaagccaaagaagcagccctgagagaggtcaacgaactcaagacacaactg
aagatggttgaagaaagccgagacggcgtgagacgagagttgatcgaagctcatcgtaag
atccgagaaggagatgagacgagggaggtgatgaggaaagagaatcttgacatcaaacgg
cagtggaatgatgacaatagagagaaggactcagtgatgaagattaatgaggaactaaga
gataaagtcaagaagactgaagcggagaagacgactctaaaccgaaatgttgaagataga
aaccagaggatagcagttttggacgaggcaaaggcaacgatccagaaggaagctggtgac
ctgaggtcaagtctccgtgaagttgagaagtctcgtcttgaagctcgccgggagctacaa
gagctcagacgtcagataaagaccctcgagacagagagagctaagagagtgaaagagatc
gaagacttgatggctcgtctctcagccgctgacgcaagagacgaagacaaccgcaaagat
atcttcacactcaagcagaagattgtcgagactgagtccaccagagaatcaatccgtaaa
gacgctgctaacctacagagacgttacgccgaactagaagatgagctacgtctcagagag
aaagattaccagatggctcttgaagatgcgaggaatactgagaggaagttatctgagaag
ctccgcgtgactgagacgtctttggagtatgcaaacggtgaaatgggagagttgaagttg
aagctgagtgctgcggagggtcggattaatggcctggaagctcagcttgctcaagttgaa
ggagccaaacgtgatgttgagttcaagcttggtagtctgcactctgcattacgtcgtact
ctaggtataggaaccggtgccccaccatcaggaagtccaggatccacactgagggctcgt
agtcccagtccaatgcgaagccgaagagggcgctctccaggtaaagttaccttcaatcta
agtacagggttcgataacacctttacgaccaccacggatgggcgagggagccctattcca
cgcactggatctcccgatcggtcacgtagtcctgagcgtagtatgtcaccaacacgttta
gagcaactagtagcggacattgatccagagacggttcgaatctctctaagagacttctct
caacagctgaagcagacggagagacagagggatgactccattatgaagattaagagtctt
cgtcaagagatgtccgagatggatgaagatagaagtcgcatcgagcaacgtcttcaacag
ctacagaaatcactgggagagatggaagaaggaaagagaggagctgatgggaggttgagt
agtgctcagactgcccttatgcttcaagaagagactattcgaagacatgaacgagagcgt
aaaggaatgcaagagaagttccacactctcgagcgctccctccaatcgtctgagaatgag
aaacgctcctgtcaggataagatagccaagatgaagcagaacgaacagcgtcttgaagca
gataaacgccaactacgtgaagctcttgaaggatccgagaatcgcgccacgcagctggag
ttgaaacgtcgggcactagagggcgatctacagagactgcagctttcaatgaatgatcgt
atcacagagaaccaggtatgtcaagagaggattgattctctaacgaagcagatacaggac
ctggagagtaggaacagctctcttcagctgacagtggatcggatgtctaacgctttagct
aagagtgaaacggatgaaacggacctcaagggcaagctccagtctttgtctatgtctttg
aatgacagcaacgtagaatcatctcagcttcaagaacacatccaacatcttcaacagact
ctgtctcagagtgagcatgatcgtagagttcttcaagaacgcttggatacagctagacat
gcagcgtctgaatctaagaagcaaaatcatcagttaatggaacgagttcaacaacttcag
aatgagatgtccgatacagagttgagacgtatggagctagaagcacagataagaaactca
caggagcttcttaagcaacgtcaagactctgaagacaacgccctcgtacaaatccaacgt
cttcaagcccagaaacaaacctcacaagagcacatcgctatgctacagagagcttatagt
aacctggagaccgagaagagagaattggaacggagtacgggacgtctggagaaagataag
actgctctgaagaaaacactggataaggttgagcgtgagaagattcgtatcgacgaggtc
gcaatgcgagtatcatctgagaaaggtgctttagataactcattgagtacctttgagcaa
gagaatactgagttacagcgtcaggtgcaggccctgcaaggttcattggcagaaactgaa
cagcagcacgctcagagattgattgaactgacgactcgtcaccgtcaagagactgacatg
gaaactgagagattgaggacggctcagcttcaatccgagaggatgctagaagccagagag
agagctcatagacaaagggtcaaagccttagaggaacaggtgagcactgtgaaggaccag
ctgaatgttgaacagaagaaacgtcagcaatatatcacaagaagcagtaagacgtcagat
gagattcaagacctcaggaatatgctgagtgattctctacacactgtctcgagagacaca
gctctagacccagtccttcttgaacatgaaacacgtaaactggacgaatcaatgggttat
ggttcaagttatggtcctggatccatcagtggtaaacatcgtagtacaaggagttcatct
ccagtacggctgagtgctcaggctacttcaactccagcccccggtagagattccaagttg
aagtcctctccacgtgttcatgacaggaacgcctccgttggcctaagtccagttgcaaga
cgctcacttcgcaaatga
DBGET
integrated database retrieval system
