Asterias amurensis (Northern Pacific seastar): 139950809
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Entry
139950809 CDS
T10870
Name
(RefSeq) coatomer subunit beta'-like
KO
K17302
coatomer subunit beta'
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139950809
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamu04147
]
139950809
Membrane trafficking [BR:
aamu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
139950809
Exosome [BR:
aamu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139950809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
TPR_GEMI5
Beta-prop_DCAF12
Septum_form
Motif
Other DBs
NCBI-GeneID:
139950809
NCBI-ProteinID:
XP_071805728
LinkDB
All DBs
Position
18:11994686..12016956
Genome browser
AA seq
917 aa
AA seq
DB search
MPLRLDIKRKLSARSDRVKCVDLHPTEPWMLASLYNGNVHIWNHDSQTLVKSFEVCDLPV
RAARFVTRKNWVVAGSDDMQIRVFNYNTLERVHNFEAHSDYIRAICVHPTQPYILTSSDD
MLIKLWDWDKKWSCAQIFEGHTHYVMQIIINPKDNNTFASASLDRTVKVWQLGSSTPNFT
LEGHEKGVNCVDYYCGGDKPYLVSGADDRFVKIWDYQNKTCVQTLEGHAQNISCVSYHPE
LPIIMTGSEDGTVRVWHANTYRLETTLNYGLERVWAIANMKGSNSIALGYDEGSIIIKLG
REEPAMSMDASGKIMWAKHAEIQQANLKSMGDLETKDGERLPLAIKDMGSCDVYPQTVSH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSALEFVWSHDSSEYATRESNTLVKIYKNFKE
KKTFKPDFGAEGIYGGHLLGVRSSSGLAFYDWDTTELIRRIEIIPRQVYWSENGELACIA
TDESFFILKFSTEAVAAAQETNEGITEDGIEEAFEVVGEIEEIVKTGLWVGDCFIYTNSL
NRLNYYVGGEIVTISHLDRVMYLLGYIAKDNRLYLGDKELNIVSYSILLSVLEYQTAVMR
RDFETADKVLPTVPKEQRTRVAHFLEKQGFKSQALAVSCDPEHRFELALQLGELKTAYDL
ALESEAETNWKQLAELATAKCEFKLAQECLHRAQDFGGLLLLASCSGDGEMVSKLADTAN
EKDKNNVGFLAYFMQGKIEECLALLCKSGRYPEAAFFARTYMPSKISEIVTSWKESLGKV
NRKAAEALADPTQYENLFVGLKEAFTGEQYLKTVKKTYPASAYPDVPSTSERNVLEEMEA
ALESGGFTGDQEVAEEPVAEDPVEDTPAVEQETPATPSKPEAVQEDDLDLDLDDLNIDDN
VGDPGDDINLDDDFLDD
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagacttgatattaagcgcaagctctctgcacggtccgaccgtgtaaagtgt
gtggacctccaccctactgaaccatggatgttggctagcttgtacaacggcaacgttcac
atctggaaccatgattcacagacacttgtgaagtcctttgaagtatgcgatcttccagtg
agagctgccaggtttgtgactcggaagaactgggtggttgctggctcggatgatatgcag
attcgagtgttcaactacaacacattggagcgagtacataactttgaagctcactccgat
tacatccgagctatctgcgtccatccaacgcagccctacatactcaccagcagtgatgac
atgttgataaagctatgggactgggataagaagtggtcctgtgcgcagatctttgaaggt
cacacacattacgtcatgcagatcatcatcaaccctaaagacaacaatacgtttgcgagc
gcctcgctggatcgaacagtcaaggtatggcagcttgggtccagcactcccaacttcacc
ctggagggacacgagaagggagtgaactgcgttgactactactgcggaggagacaagccg
tacctagtgtctggagctgatgatagattcgttaagatctgggactaccagaataaaacc
tgcgttcagacactggaaggacatgcacagaatatctcatgtgtgagttaccaccctgag
ctgcctatcattatgactggatcagaagatgggacagtacgtgtctggcatgccaacacc
tatcgcctagagacgacgctaaactacgggctggaacgtgtgtgggccatcgctaacatg
aaggggagtaacagtatagctttgggctacgatgaaggaagcataatcattaagcttggg
agagaagagccagccatgtccatggatgccagtgggaagatcatgtgggctaaacacgct
gagatacagcaggctaatctcaagagcatgggagatctagaaacaaaagacggtgagcga
ttgcctcttgccattaaggacatgggaagttgtgatgtctacccacaaacagtcagccac
aaccctaacggcagatttgtcgttgtgtgcggtgatggagagtacattatctacacagcc
atggcactccgtaataaaagttttggatccgccctggagtttgtgtggtcacatgattcg
tcagagtatgcaactcgtgaaagcaacactcttgtcaaaatctacaaaaacttcaaagaa
aagaaaactttcaagccagactttggcgctgaaggtatatacggaggtcacctcctcggt
gtccgctccagcagtggtttagccttctatgattgggacacgacggaactgatacgcaga
attgaaatcattcccagacaggtatactggtcagagaacggagagctggcttgcatcgct
accgacgagtccttcttcatcctcaaattcagcacagaggcagtcgctgctgcacaagaa
acaaacgagggtatcacagaggatgggattgaagaagcattcgaggttgtaggggagatc
gaagaaattgtcaagaccggtctgtgggtcggcgactgcttcatttacaccaactcgctc
aatcgactcaactactacgtgggtggagagattgtcaccatctctcatcttgatcgagta
atgtacctgcttggctacatcgccaaggacaaccgtctgtacctcggcgacaaggaactc
aacatcgtcagttactcaatcctcctctccgtcttggagtaccagacggccgtcatgaga
cgagactttgagacggccgataaggtgctgccgacagtccccaaggaacagcggacccgg
gtagctcactttttggagaagcagggcttcaagtcccaagcgctggccgtgtcgtgcgac
cctgagcacaggtttgagttggcgctgcagctgggtgaacttaagacggcgtatgattta
gcgctggagtctgaggctgaaactaactggaaacaactggctgaacttgcaactgccaaa
tgtgagttcaaactggctcaagagtgtctccacagagctcaagacttcggcgggctgttg
ctgctggccagctgctctggggacggggagatggtctccaagctggccgacacggccaac
gagaaggacaaaaacaacgttggattcttggcgtatttcatgcagggaaagattgaggag
tgtcttgccttactgtgtaagtcaggtcgctatccagaagctgccttcttcgccaggacg
tacatgccaagcaagatatcagaaatcgtgacatcgtggaaggaaagcctcggcaaagtg
aacaggaaagcggccgaggccctagctgatcccacccagtacgagaatctctttgttggg
ctgaaggaagccttcacaggggagcagtacctcaagacggttaagaagacctacccggcc
agtgcctatccggatgtaccgagcacttcggagaggaatgttttggaagaaatggaggca
gcattagaaagtggaggctttacaggggaccaagaagttgcagaggagccagttgcggaa
gacccagttgaggataccccggccgtagagcaagagacgcctgctactccttcaaaacca
gaagcagtacaagaagacgatttagacctagatttagacgatcttaatatcgacgacaat
gtcggagatccaggagacgacatcaacctagatgacgacttcttagatgattaa
DBGET
integrated database retrieval system
