Asterias amurensis (Northern Pacific seastar): 139950855
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Entry
139950855 CDS
T10870
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04120
Ubiquitin mediated proteolysis
aamu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139950855
04120 Ubiquitin mediated proteolysis
139950855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamu04121
]
139950855
Enzymes [BR:
aamu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139950855
Ubiquitin system [BR:
aamu04121
]
Ubiquitin ligases (E3)
U-box type E3
139950855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
139950855
NCBI-ProteinID:
XP_071805789
LinkDB
All DBs
Position
18:complement(15214887..15236506)
Genome browser
AA seq
1146 aa
AA seq
DB search
MSELTPDEIRRRRLARLDGRSAATSKTPQAGIDLASEPCGSSVKPDNVDSKEMVQERIPE
APKPQEADSAMEKPRLSGMETDESQSSQSQAAESMESALNVHDSLDSGFPASMEMDSESC
DQGSQSQMDVDSGIENPELEETDKKVKKLSAEKEPSQKTLSEADLLQMVSRIFRVSWKEQ
GRDVVYLAGLATEFAEEPEQVFSNTEDLIGQVMMEVLTQHACTGNPFANLSASSSTVSAA
STGGHSPQSSSQQPSPQPSSAGDQCGREPENPESEMLSYLLQSYRRVMAEERASPKRYSQ
TQFKRLVSSARSQCVYHAALVLQGAFTQPGNAPSMLLPHLLAHSLPTSFLRDLVAATHED
ASSFGLIFTPVLVGLVQEIQRCSLDNDKYKASLTAMNELCKIKLGNSKPICKLITSLPEW
LPDPITGAAGREVEKLSLLGAFLSLSVFAEDNTKVVEKYFSGPMLTQDDIRLLNESLQHH
LHYVRKELHDIVHSILVNSDSREAMVTYFATVIKRNQKRAQMQVDESLVAGDGSMLNLLV
ILQKLSTKITLDMIDVMYPHHPKSLIDIANDTRLKATSQEATEWVEQTKKPPTSWADPKF
PTQCYFLTLHCQHLALMPACRHFTRRIRGMRELARMVEEMQGQEEQWKGTPNERRNRQLL
DKWKSQIKKLDKAKMCGDAGLLDETLLRNCFQFYGSVMSLLLMMLKPKDQERISLPLPKE
VPMEFATLPEHYIEDIAEFILFTVQHCPQALEDTAQQDMVQFIVTIICSAHCIRNPYLVA
KLVEVVFVLSPAVQAKTAKIYEAIQLHRLALNHLVPSLMTFYTDVEQTGASSEFYDKFSI
RYHISIIFKSLWRLPMHQNAMVRFSTTQSEFVRFINMLMNDTTFLLDESLACLKRIHEVQ
EAMKNKEAWNALDQEERQGKTRQLSTDERQCRSYLTLANETLEMFNYLTNVIKKPFLRPE
LCDRLAAMLNFNLQQLCGPKCNDLIVENKDKYGFQPRKMLDRLTTIYLNLDSEELAVALA
NDERSFRAELVKDAIHFLYKFKTHSEIQQFSKLMDRASEIRTRIQQQEMDFDDAPDEFKD
PLMNTLMYDPVILPSGHIMERKIIERHLLNSQTDPFNRQELTSDMLEPATDLKQKILEWM
QSKSTL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcttactccagatgagattcgtagaaggcgcctagcccggcttgatggccgc
tcggcggccacttcaaaaactccacaagccggcatcgatctggccagtgagccctgtggg
tcctcagttaaaccagataatgtagatagcaaagaaatggtccaagaacggatccctgag
gcacccaaaccacaagaagctgatagtgccatggaaaagccgagactcagtggcatggaa
acagacgaatcacagagcagtcaaagtcaggcggctgaatcaatggagagcgccctcaat
gttcacgacagtctggactcgggatttccagctagtatggagatggattcagagtcatgt
gaccagggaagccaatcccagatggacgtggactcagggatcgagaacccggagctggaa
gaaacggacaagaaagtaaagaaattgtctgctgaaaaggaaccttcccagaagacactg
agtgaagccgatctcttacagatggtgtctcgcatctttcgcgtatcgtggaaagaacaa
ggaagagacgttgtgtacttggccgggctggccactgagttcgccgaagagcctgaacaa
gtgttttccaatacagaggacctgattggtcaagtgatgatggaggtgctaacgcaacat
gcgtgcaccggtaacccgtttgcgaatctctccgcaagctcatctacagtgtcagcagca
tccacagggggccactctccacaaagttcatcacagcagccgtctccacagcccagtagt
gctggggaccagtgtggcagggaaccagagaatcctgaatcagagatgttgtcatatcta
ctccagtcttacaggcgtgtcatggccgaagagcgtgcctcgcccaagcgttacagtcag
acacagttcaagaggctagtctcttctgccaggtcacagtgtgtttaccacgcagcgtta
gtcttacagggagccttcacacaaccagggaatgctccgtccatgcttttgccgcatctt
ctagctcactctcttcccacgagcttccttagagacctggttgcagccactcacgaagat
gcatccagttttggattgatatttaccccagtgttggttggtcttgttcaggagatacag
agatgctccctagacaatgacaagtacaaagcatcgttaactgcaatgaacgagttgtgc
aaaatcaaattaggaaactccaaacctatatgcaagcttattacgtccttaccggagtgg
ttaccagaccccatcaccggcgctgccggcagagaagttgaaaaactctctcttttagga
gccttcctgtcactctccgtctttgctgaagataatacaaaagttgtcgagaaatatttc
tctgggccgatgttgacacaggacgacattcgactgctcaatgaaagtttacaacaccat
ctacactatgtcaggaaagagctacatgacattgtgcacagcatcctcgttaactccgac
agtcgagaggcgatggtgacgtattttgcaaccgtcataaaacggaatcagaaaagagca
cagatgcaggtggatgaaagtctcgttgccggcgatggatccatgctgaatctcctggtc
attttacagaaactcagcaccaaaatcactctagatatgattgatgtgatgtaccctcat
catcctaaatcccttattgacatcgccaatgacaccagactaaaagcaacatcacaagag
gctactgaatgggtggagcaaaccaaaaaacctccaacgtcttgggctgatcccaagttc
ccgacccaatgttacttcctgacgttgcactgccagcacctagccctgatgccggcgtgt
cgtcacttcacccggcgtatccgggggatgagagagcttgcccgcatggtagaggagatg
caaggacaggaagagcagtggaagggcacgcccaacgagagacgtaaccgacagctcctt
gataaatggaagtcacagataaagaaacttgataaagccaagatgtgtggcgatgcaggc
ctccttgacgagacactcctcaggaattgcttccaattctacggctcggtcatgtccctt
cttctgatgatgctcaagccaaaggaccaagaaagaataagtctacctctgccgaaggaa
gtgcccatggaatttgccactctaccagaacactacatcgaagatatcgctgaattcatc
ttatttactgtgcaacactgcccacaagctcttgaagacactgcccaacaagacatggtt
caattcatcgtgaccatcatctgctctgcccactgtatccgtaacccgtacctcgtcgct
aagctagtagaggttgtatttgtcctgagtccagcagttcaggcgaagacggcaaagatt
tacgaagccatccagctacatcgactagctttgaatcacttggttccctctcttatgact
ttctatacagatgttgagcagaccggtgcgagcagcgagttctacgacaaatttagcatt
cgctaccacattagtattatcttcaaatcgctatggcgacttcctatgcatcaaaatgcc
atggtcagattcagcacaacgcagtctgagtttgtacgttttatcaacatgctgatgaac
gacactacattcctactggatgagagtttagcttgtctaaagagaatccacgaggttcag
gaagccatgaagaacaaagaagcatggaatgctttggatcaggaggaaagacaagggaag
actcgccagctctctacggatgaacgtcagtgtcgatcctatctgacattagccaatgag
actctagagatgtttaattacctcactaacgtcatcaagaaaccattcctaagaccggaa
ctttgcgatcgtctcgctgccatgctgaactttaaccttcagcagttgtgcggaccaaag
tgcaatgacctcattgtggagaacaaagacaagtacggcttccaaccgcgcaagatgctc
gaccgactaaccacgatctacttaaatctggacagcgaggagctggctgttgcccttgcc
aatgatgagcgctcgtttcgagccgagctggtcaaagatgcgattcacttcctgtacaaa
ttcaagacgcattctgagatccagcaattctcaaaactgatggatagagccagcgagatc
cgaacaagaatccaacagcaggaaatggactttgatgacgctccggacgagttcaaagat
cctctgatgaatacactaatgtatgacccggtcattctcccctccggtcatatcatggag
agaaagatcatcgaacgtcatctcctcaactcccagacagatcccttcaaccgtcaagaa
ctcaccagcgacatgctggaaccagccactgatctcaagcagaaaatcttagagtggatg
caatccaagtctacactgtga
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