Asterias amurensis (Northern Pacific seastar): 139951072
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Entry
139951072 CDS
T10870
Name
(RefSeq) DNA damage-binding protein 2-like isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03420
Nucleotide excision repair
aamu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139951072
09124 Replication and repair
03420 Nucleotide excision repair
139951072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamu04121
]
139951072
03400 DNA repair and recombination proteins [BR:
aamu03400
]
139951072
Ubiquitin system [BR:
aamu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139951072
DNA repair and recombination proteins [BR:
aamu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
139951072
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
139951072
NCBI-ProteinID:
XP_071805996
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All DBs
Position
18:10687946..10700211
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AA seq
527 aa
AA seq
DB search
MGTRSPGTTVFFRLLLSTQVKVIMKDHNEANGVDSGKRVLRPRKVASAVESHTPTETIKE
VTVNQPTVISCNSSADENANIWKKTLAQNALKPIATNPIGLNSNSMLHRLYHRSCRSSHI
NKLKQAVVQLYVGQTLKNFRIQSTASPFDRRVTAMDWHPTLPKTLAIASKSGDIALWSYE
KTAQVHLIKGMGKGGSVTSMTFDLDDPSGVYTASIDGTFCRQCLEGNRQNSHQVFLSTGN
YSRWYCCTGVSYARKLLLAGDNVGNMTMMEKEGGKALWTKRLHKSKANHCEFNKQCDWLM
VSASGDKTVRIWDVRMISDRKSALYELPHKKPINSACFSPDGTKLLTTDQHSELRIYAGP
LWDRMEQSIAHPHRFFQHLTPIKGSWHPIHNLVIVGRYPDKKSPSYQEGENRTIDVIDGS
SGEIVCQLLDPNVQPGIVSLNQFSPFGDSLASGMGGSVLIWTDAVKLEQIRHDKLKKTLS
ENGQDPGKIANPIPDLALQRRRRRRRQDDDDDIVAMKQRLKGKLARK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccagaagtccaggcaccacggtgttcttcagattgttgttatctacacaagtc
aaagtcattatgaaggatcacaacgaagcgaatggagtagattctggaaagcgagttttg
aggccacgtaaagtggcttcagctgtcgagagccatactcccacagaaactattaaggag
gtgacagtaaatcagccaacagttatctcctgcaactcatcagccgatgaaaatgccaac
atatggaagaagacactggcccagaacgctctgaagccgattgccaccaatccaattgga
ctcaacagtaacagcatgctacacagactctatcatagatcatgtagatcttcacacatc
aacaaactcaaacaggcagtggtacagttatacgttggacagactttaaagaacttcagg
attcagtctacggcaagtccatttgatcgacgggtaacagctatggattggcaccccacc
ctccctaaaacacttgctatagcctccaaaagcggtgacattgccctatggagttatgag
aaaactgcacaggtccatttaattaaggggatgggcaaaggtggttcagtgacctcaatg
acatttgaccttgatgatccaagtggagtctacactgcttccattgatggaacattttgt
cgtcagtgcctcgaaggaaatcgtcaaaactcacatcaagtctttctcagtactggaaat
tacagtcgctggtattgctgcactggtgtcagctatgcaaggaaactacttcttgctggt
gacaatgttggcaatatgaccatgatggagaaggaaggtgggaaggctctctggaccaaa
cgcctccataaatcgaaagccaaccattgcgagttcaacaagcagtgtgattggctgatg
gtctctgcatcaggcgacaaaactgtccggatctgggatgtgagaatgatatcggatcgt
aaaagcgccctctatgaactacctcataagaaaccgattaactctgcatgttttagtcca
gatgggacaaagttattgacaactgatcagcacagtgagttgaggatttacgcaggcccc
ctatgggacagaatggaacagtccatagctcatccacatcgctttttccaacacttgaca
cctataaagggttcctggcatcccattcataaccttgtgattgttggtcggtaccctgat
aaaaaatcgcccagctaccaagaaggagaaaatagaaccatcgacgtcattgatggcagc
tcgggtgaaatagtctgccagctgttggacccaaatgtgcagccagggatagtttcactg
aatcagtttagtccgtttggcgattccttggcatcagggatgggaggaagtgttctcatc
tggacagatgcggtgaagctggagcagatccgccatgataaactgaagaagactctttcc
gaaaacgggcaggaccctgggaagatagctaaccccatcccggacctagcattgcagagg
aggcgacgacgtagacgtcaggatgacgatgatgatatcgttgccatgaaacaaagactt
aaaggaaaacttgccaggaaatga
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