Asterias amurensis (Northern Pacific seastar): 139951690
Help
Entry
139951690 CDS
T10870
Name
(RefSeq) ATP-dependent RNA helicase cgh-1-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03018
RNA degradation
Brite
Enzymes [BR:
aamu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139951690
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139951690
mRNA degradation factors
5'-3' decay
Decapping complex
139951690
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139951690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139951690
NCBI-ProteinID:
XP_071806815
LinkDB
All DBs
Position
19:complement(14162471..14181476)
Genome browser
AA seq
517 aa
AA seq
DB search
MASAAAAAPGQEVNRMNNHGANSPARGVDGSLVRQGPPPSMGGMGSLKMNGPQSNANASA
SQNAAKSKVVQSNNSSGKPASGDWKAGLKQPPKDSRFKTSDVTNTKGNEFEDYCLSHGLL
KGIFEKGWEWPSPIQEASIPMALSGHDIIARAKNGTGKTGAFTIPMLERTQLNKNEVQGL
VLVPTRELALQTSQICKELSKHLGHQVMVTTGGTSLRDDIIRLQQTVHLIIATPGRILDL
CRKGVAKLDKCGILVLDEADKLLSQDFKNMLDDLIAFLPNDRQIMLYSATFPTTVKAFME
RYLPNPYQINLMEELTLKGITQYYAYVKEREKVHCLNTLFSKLQINQSIIFCNSTQRVEL
LARKVTELGYSCFYIHSKMRQEHRNRVFHDFRMGACRNLVASDLCTRGIDIQAVNVVINF
DFPKLSETYLHRIGRSGRFGHLGLAINLVTHEDHKSLCLIEQQLATEIRPVPSEVAIDKS
LYVAEFQMPGGDDDRKKPTQPGSSKGQSTKPKQNNAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcagccgctgctgcaccaggccaggaggtaaacagaatgaacaatcacggt
gctaacagtcccgctcggggagtcgacgggagtcttgtgagacaaggtccgcccccatcc
atgggaggaatgggttccttaaaaatgaacggacctcagtcaaatgcaaatgcatcggca
agccagaacgctgccaagtctaaagtggtgcaatcaaataactcatctggaaagcctgct
agcggagattggaaagctgggctaaagcaaccaccgaaagattccagatttaaaacaagt
gacgtgacaaacacaaagggaaacgagtttgaggactactgcctgagtcacggtctccta
aaaggcatcttcgagaaggggtgggagtggccttcccccattcaggaggcaagcataccc
atggcgctttcaggtcatgacatcatcgccagagcgaagaacggaacgggtaaaaccggc
gcattcacaatcccgatgctggaacgcacacagttgaacaaaaatgaagtacaaggtttg
gtgttggtaccaacgagagagttggcgctgcagacgagtcagatctgcaaggagctgtcc
aagcatctcggccatcaagtcatggtcacaacgggaggtaccagtctcagagatgacatc
atccgtttacagcagacagtacatcttataatagcaacaccgggccgtattttggactta
tgccgtaagggcgtggccaagctggacaaatgtgggatccttgtgctggatgaggctgac
aagctgctgtcacaagatttcaagaatatgctggatgaccttattgccttcttgcccaat
gaccgtcagatcatgctgtattctgccacctttccaacgacagtaaaagcatttatggag
aggtacctgcctaatccctaccagattaacttgatggaggagttgacgttgaagggaatc
acgcagtattatgcgtacgtcaaagaaagagaaaaggtccactgtcttaacacactcttc
tcaaagctgcaaatcaaccagtcaatcatcttctgcaactccacccagcgcgtggagttg
ctggcccgcaaagtgacggagctaggctattcatgtttctacattcactccaagatgcga
caggaacacagaaatagggtcttccatgacttcagaatgggtgcctgtcgcaacctggtg
gcttctgatctttgcaccagaggtatcgacatccaagccgtcaacgtagtcatcaacttt
gacttccccaagctctcagagacgtacctacatcgcatcggtagatccggccgctttggt
cacctcggtctggccatcaatttggtcacgcatgaggaccacaagagtctctgcttgatc
gagcagcagctagccactgagattcgcccagtgcccagtgaagtggcgattgacaagagt
ttgtacgtcgccgagttccagatgcccggaggagatgatgacaggaagaagccgacacaa
cccggttcgtctaagggtcagtcaactaagccaaagcaaaacaacgctaagtaa
DBGET
integrated database retrieval system
