Asterias amurensis (Northern Pacific seastar): 139952096
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Entry
139952096 CDS
T10870
Name
(RefSeq) intraflagellar transport protein 52 homolog isoform X1
KO
K19681
intraflagellar transport protein 52
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamu03037
]
139952096
Cilium and associated proteins [BR:
aamu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
139952096
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
ThuA
Motif
Other DBs
NCBI-GeneID:
139952096
NCBI-ProteinID:
XP_071807150
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All DBs
Position
20:complement(13387190..13405023)
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AA seq
462 aa
AA seq
DB search
MAPISQDMEDKSQRTTIAFDVSKRELFTPQNGFKSLHKKLRSNWKITSQKDEITEEKLAN
VKVFVLAGPREKFTAPEFEVIKKFVDGGGSVLVMMGEGGESKFDTNINFLLEEYGIMVNN
DSVVRTSYYKYFHPKEALVANGVLNRAISVSAGKIIQSIGEDEAGNDTKKDAAQSGAHVS
EINDEKGSNYREALTYLFPFGATLNVAKPATAILSTGTVSFPLNRPICALHSSKYSKGKL
AVLGSVHMFSDQYLDKEENAKIMDVLFQWLTTENVVLNAIDAEDPEISDYNMLPDTAKLA
DNLRCCLQEHDDTPRDFNSLFSSKLYTLDTTTVPKVIRSFEHLGVKHEQLALIQPQFETP
LPSLQPAVFPPAFRELPAPALDLFDLDESFSSEKVRLAQITNKCTDDDLEYYVRECGEIL
GVSNKLPADSRDAKHILEHIFAQVVEFKKLNQEGDVGDEGIY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgatatcgcaggatatggaagacaaaagtcaacggacaacgattgcgtttgac
gtatcaaaaagagaactcttcacaccgcagaatggcttcaagagtctacataaaaagcta
cgtagcaattggaagatcaccagtcaaaaggatgagattactgaagagaagcttgcaaat
gttaaggtgttcgtcttggcgggacctcgagagaaattcactgccccagagtttgaagtc
atcaagaagtttgttgacggaggaggaagcgttcttgtcatgatgggggaaggtggggag
agtaaattcgacacaaatattaacttcttattggaggagtatggcattatggtcaacaat
gatagtgtagtcaggacatcctactacaagtattttcatccgaaggaagcgctggtggcg
aacggagtcttgaacagggcaatcagtgtatcagcaggaaagatcattcagagcatcggt
gaagatgaggctggaaacgacacaaagaaagacgcagctcagtcaggcgctcatgtgtct
gaaataaatgacgaaaaaggctcaaactatagggaagctttaacgtacctgttcccgttt
ggagcgacgttaaacgtagctaaaccagcaactgccattttatcaacgggaacggtctct
ttcccactcaatagacccatttgtgctctgcactcatccaagtattcaaaaggtaaactt
gcagtgcttggctcagtccatatgttcagtgatcaatatctcgacaaggaagaaaacgca
aagatcatggacgtactcttccagtggcttaccacagagaatgttgtactcaatgccata
gatgcggaggatcctgagatatctgattacaacatgctgcccgacacagcgaaactagcg
gacaatctaagatgttgcttacaagagcacgacgacacaccgcgcgacttcaactcgttg
ttcagtagtaaactctacactctggataccacaacggtacccaaagttatcaggtccttt
gagcatcttggagtcaagcatgaacagcttgctttgatccaaccacagtttgagacgccc
cttccttcacttcaaccagcggtctttcctccagcgttcagggagctcccggcaccagcc
ctcgatctgtttgacctcgacgagtcattctcatcagaaaaagtcagacttgcacaaatc
acaaacaaatgcacggatgacgatttggaatattacgttcgagagtgcggagaaatcctt
ggagtgagtaacaagctaccggccgactcacgagatgctaaacatatcctggagcatatc
tttgctcaggtggttgaattcaagaaactcaatcaggagggtgatgttggtgatgaaggc
atttactga
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