Asterias amurensis (Northern Pacific seastar): 139952171
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Entry
139952171 CDS
T10870
Name
(RefSeq) uncharacterized protein
KO
K14296
nuclear pore complex protein Nup153
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03013
Nucleocytoplasmic transport
aamu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139952171
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139952171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139952171
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139952171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
139952171
NCBI-ProteinID:
XP_071807290
LinkDB
All DBs
Position
20:14526671..14543162
Genome browser
AA seq
1629 aa
AA seq
DB search
MASTGGGKMRPKRSHGANKPYQRTRPKSFLDRVKDMVTPSWLSNMWASSPPEESSNQQQH
TASSTNSIPQRQTVSPDERYFNPIEIDMVQDSEPRPFRTGVQRVTEEGVTTPVLTPFAGL
SVPVSTSTPVDVDEDDEVIEIDVGEGPSTQKDDVLSVVSSLYPNLDKLEHQEKLSDSNLD
VLSDLGHRSTPRPSTSLWSHTPSGRQATTRARPAPSSLSRPQQPAISTRKPSFNTSYFGT
PRGSVKTTMDTSTSSPFYPGRTTFGGSSSLRSTASKRPRTSPYEVHLPIKRSVRPRLVKP
ADGSNMGITSNTAKRILDTLEKMSTPLSDAKRIPLSPSSTPLAFTASRTPRPRPAQSPQR
SVGLSHSSVRIPGPPVSGYNTPRTVSITPNRQPPLATSTELPKNERPSTSKATQEKTVIS
NPQSSVPVSTPAFTGFSFKPNTQTSSSPAQSSLFRVDTTPEQSSSLDKGSSGGKMKMPKR
SSMHYSSHKDEDDVIEVPDLPNIPLPLGSNKSLPSFNFGKPLLPAKQTTSSFSTPPAAAA
SVPSQGFNIVTSKPAVSVPATAKNDEQEFTFASPILRQSSSTISAPEIETTEAFTFSLPK
KADAFPSPPSTQMNFMKSSSSSQPPQTSSFMAKSPVKTPPRDHQSDEEDRGGFGIKPAKT
LKTGSCLEVFGLVPSSDQTSMEATTETLTTSSNNTISAFAEKFKPPPGSWECDTCLIQNK
ADDNKCISCQTAKPQMVNSHAIPSSSSSSDVNAMNDLQARFKPPEGSWECPTCEIQNKQD
VNKCVACMTPNPDSSTKAAPVTTNSLMDSFKPPSGSWECDTCLVENNAEAIKCVACTTAK
PGVAGSNNLKMSSNTPLTNSNSGSWHCASCPEKNNSDVLKCNGCGVLKPTSNSTDSLMDK
FRPPTGSWTCVVCMITNKESTDRCIACTAPKPGSQPSLNTPPASVFKLGSQSSSSTSSTA
GDFQFGGTTSSVNFGAAMSKGFSIPTGGVTFGSQKADTGLAFGSQKDGPTSGFQFGSNSE
EKTNSLPAASTVQFGSVKTSKTDSGFSFGAPTPSTASSTTKEDKPAVGASFQFGAAATTT
TTTKADATPPNVDPFKSAEPSKTAFGAGGQMVNATPTSTQETDNKAQPKAVFSFGGNKAE
TSTINFGAAVTEQKQTSTPNTTFAFGAKAPATDNNPPKSQSTFNFSASSNPPTTSESQQS
TGKTVFKFGGTPSDTKDEPKPPSSSAGFSFGNTSNAVNKTTQPTPHQNSMPPAYQFGQSN
AGSDEAGTGAPLAKRGATFGSSVKPASAPESKASFSFGGTPSQTAPQQPSTTFVFGASEN
KVETQSKANGGITFGTPSQSATTSQPSDQFTFGAATNSNKTGGFNFSASANPTAAPAAAT
GGFQFRAGASITKPKENAPPAYGAFGGSNATSSTVFGAFGAPATTNSTPNPFGGQQPSQA
VAPTFGTPSSSSVFGSVAAATPAFGTVASANNSRSSTPTFGATGGNAAPGFGSSGTTVPA
FGAGATNSGIGFQAEAAAPAGFNYGANNATSTVPGLFAFGAANNNAAQSTAAAPQSTGGF
NFGGQQQQQQQPSGFGAQNTTGAAGSTPGVFAFGGNQAPAASSFSFGQAGSQQQQPRKIR
KAVRRTRKT
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcacgggtggcggtaagatgaggccaaaacgttctcatggggccaacaagccc
taccaacgaacccgtccgaagtcattcctggatcgagtgaaagatatggtgactccatcg
tggctatcaaacatgtgggccagtagcccacctgaagaatcctcaaaccaacaacaacat
accgcatcctccacgaactccatccctcagaggcaaactgtctcccccgatgagcgatac
tttaacccaatcgagatagacatggtgcaggattctgagccgagaccattcagaacgggg
gtgcaaagagttacagaggaaggagtcaccacaccggtactcaccccctttgctgggttg
tctgtacctgttagtacatcgacaccagtagatgttgacgaggacgatgaagtcatcgag
atagatgttggtgaaggaccctcaacccaaaaagatgacgttttgagtgtcgtatcgtcg
ctttatcccaatctggataagttggaacatcaagagaaactttccgattctaatctggat
gttctctcggatcttggccacagaagtaccccaaggccttctaccagcttgtggtctcac
acaccctcgggcaggcaggcaactacaagggcaaggcctgcaccatcatcgctgagcaga
cctcaacaacctgctattagtacacggaaaccatcattcaacactagttacttcggtact
ccaagagggagtgtaaaaacaacgatggacacatctacttcatcacccttctacccaggg
aggacaacatttggcggttcatcatctctgaggtcaacagcatctaagagacctaggacc
tcaccctatgaggttcacctcccaatcaagcgttctgttcgtccgaggttagtgaagcca
gccgatgggagcaacatgggaatcacaagtaatactgccaagaggattctggatacttta
gagaagatgtctactccgctatcggatgctaagaggatacccttatcaccatcttcaaca
cctctagcttttactgcgagtcgaacccccaggccaaggcctgcgcaatccccacagcgt
tcagtcggcttgagccacagcagtgttagaataccaggcccaccagtctctgggtataac
actcctcgtacggtcagcattacgcccaacaggcaaccacctttggccacctctactgag
ttaccaaagaacgaaaggccctcaacctccaaggcaacgcaggaaaagactgtcatctct
aacccacagagcagtgtgcctgtttcaactccagcatttactgggttctctttcaaacca
aatacacaaaccagcagctctccagcacaatcttcattgtttagagtagacacgacacca
gagcagagcagttcacttgataagggtagcagcgggggcaagatgaagatgcctaaacgt
agcagtatgcactatagctctcacaaagatgaggatgatgtgattgaagttcccgacctt
cccaatataccactaccccttggtagcaacaaatccctgccctcattcaacttcggcaaa
cccctcttaccagcgaagcagacgacatcatccttctctacaccaccagcagctgctgcg
tctgtccccagccagggtttcaacattgtaacctccaaaccagccgtctcggtgcctgca
actgccaagaatgacgagcaggaattcacatttgcttcaccgattctccggcagtcttca
tcgacaatatcagcgcctgaaatcgagactacagaggcttttacgttcagccttcctaag
aaagctgatgcattcccctctccaccttcaacgcaaatgaacttcatgaagtcgtcttcc
agcagccaacctcctcagacatcctccttcatggctaagagtcctgtcaagactcctcct
cgggatcaccaaagtgatgaagaagacaggggaggctttggtattaagccagcaaaaaca
ctcaagactggtagttgcttagaggtcttcggacttgttccatcctcagaccaaacgtca
atggaagcgacgacggaaaccctgacaacatcttcaaacaacacaatatcagcttttgcc
gagaagttcaaacctccccctggctcatgggagtgcgacacctgtctgattcagaacaag
gctgacgacaacaagtgcatctcctgccaaactgccaaaccacaaatggtcaactcacat
gccattcctagcagtagtagtagtagtgatgttaatgccatgaatgacttacaagctcgg
tttaaaccaccggagggatcttgggaatgccccacgtgcgagattcaaaacaaacaggac
gttaataagtgtgtagcgtgcatgacgcccaatccagactcgtctacaaaagcagcacct
gtaactacaaattctctaatggactcgttcaaaccgccctcggggagctgggaatgtgat
acttgtcttgtagagaataacgctgaggcgatcaagtgtgtagcttgtactacagctaaa
ccaggagtggctggttctaacaatctcaaaatgtccagtaatacaccattaacaaactcg
aacagcgggagctggcactgtgcgtcctgtccggagaagaataatagtgacgtcctaaaa
tgcaatggctgtggtgttctgaagcctacttcaaactctaccgattccttaatggataaa
tttagaccaccgacagggtcatggacttgtgttgtgtgtatgataactaacaaagaatca
acggataggtgtatagcatgtacagcgccaaaacctggtagtcagccctcgctcaatacg
ccaccagcatcagtatttaaattgggtagccagtcatcctcaagcacaagctcaacagct
ggcgacttccaattcggtgggacaacctcaagtgtgaatttcggtgcagctatgtcgaag
ggcttcagtatacctacaggtggagtaacatttggcagccaaaaggcagacacaggacta
gcatttggttcacaaaaagacggccccacttctgggtttcagttcggttcaaactcagag
gaaaagacaaactcattgccagcggccagcactgtacagtttggttcggtcaaaacaagt
aaaacggacagtgggttttcatttggtgcaccaacaccaagcacggcctcgtcaacaacg
aaagaagataagccagcagttggcgctagtttccaattcggtgctgctgctacaacaaca
acaacaacaaaagctgacgcaacacctccaaatgtggaccctttcaagtcggcagaacca
agcaaaacagcttttggagctggaggacaaatggtaaatgccacccctacatcgacccaa
gaaacggacaacaaagcacaacccaaagcagttttttctttcggtggaaacaaagctgaa
acctccactataaattttggtgctgctgtcacagaacaaaagcaaacgtcaacacctaat
accacatttgcatttggagctaaagcaccagcaacagacaataacccacctaaaagtcaa
tcaaccttcaactttagtgccagttccaatccacctactacatcagagtcgcagcaatca
acaggtaaaacagtcttcaagttcggcggcacaccatcagacactaaagatgagcccaaa
ccaccaagcagtagtgcaggatttagctttgggaacacctctaacgctgttaataagaca
acgcaaccaacacctcatcaaaatagcatgccgcctgcgtatcagtttggccagtccaat
gcaggctctgatgaggctggtacgggtgctccacttgctaagagaggcgctacattcggt
tcgtctgtcaaaccggcgtcggctccagagagcaaagcttccttctcatttggtggtact
ccgagtcagaccgcaccccagcaaccttctactacatttgtattcggtgcctctgagaac
aaagttgaaacccaatccaaagccaatggaggtataacctttggaacaccgagccagagt
gcgacgacttcacaaccaagtgatcagtttactttcggagcagcaaccaactccaacaaa
actgggggcttcaacttctcagcatcagcaaacccgactgctgccccagcagcagccaca
ggtggtttccagtttagagcaggagcttctataacaaaaccaaaggaaaatgctccccca
gcatacggagcattcggtggctcaaacgcaacatcaagcacagtttttggagcattcgga
gctccagcaacaaccaactctactcccaacccattcggagggcagcagccatcgcaagca
gttgctcctacctttggtaccccaagcagctcaagtgtctttggcagtgtagctgctgcc
accccagcgttcggcacagtagcgtcggctaataactctaggtcatctacacctacattt
ggggcaacgggaggaaatgcggcacctggatttgggagttctgggacgactgtgccagca
tttggtgcaggtgcaacgaattctggaataggatttcaagcggaggcagcagctccagca
ggctttaactatggagcaaacaatgccaccagtacggttcctgggctgttcgcctttgga
gcagctaacaataacgcagcccaaagcacggcggcagctcctcaatcaactggtgggttt
aactttggtggacagcagcaacagcaacagcagccgtctgggtttggagcccagaatacc
acaggagctgcaggctcaactcctggtgtctttgcatttgggggtaatcaagcacctgcc
gcctcctccttcagttttggtcaagcaggatcccagcagcagcaaccacgtaagataagg
aaagccgtacgtaggacgagaaagacatag
DBGET
integrated database retrieval system
