Asterias amurensis (Northern Pacific seastar): 139952477
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Entry
139952477 CDS
T10870
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamu03036
]
139952477
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139952477
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
LIG3_BRCT
BRCT
BRCT_2
DEAD
ERCC3_RAD25_C
SWI2_SNF2
AAA_34
PTCB-BRCT
AAA_22
Motif
Other DBs
NCBI-GeneID:
139952477
NCBI-ProteinID:
XP_071807715
LinkDB
All DBs
Position
20
Genome browser
AA seq
1025 aa
AA seq
DB search
MDRIRRKIKEVGEAKNVEKVYVDGKAMTKFGLSGITYRPYQLDGVNWMIQRYHRNHGCIL
GDEMGLGKTCQTIGLLTYLFGSGESQGKYLVVSPLSVMGNWRDEFERFSPNLKCIVYMGD
KETRAAMRSEIKHSKWQVLMTTYELCMNDASFLQSYDWEVLVVDEAHRLKNHNSLLHQTL
KEFTIGHHLLLTGTPVQNNLTELYSLLSFVAPRVFRRTLKDDFLEEYEDVTEDEVKNDLH
SVLLPFLLRRTKNEVVLDIPKKSEVILYHGLSALQKNLYKAVLTKDYEAFRQADPWSQKP
KTRLMNVLVQLRKVVNHPYLFDGVEPEPFELGEHLVESSGKLHLLDQLLVFLHQRNHKVL
LFSQMTRVLDILQDYLGYRGYSYERLDGSVRSEERFSAIRNFNEHDETFAFLLSTKAGGQ
GLNLVAADTVIFVDSDFNPQNDLQAAARAHRIGQTRPVKIIRLVGRDSVEEVILKRADAK
LKLTNTVIEGGKFSLGGVGPAENATQLSEMLKFGLDKLLQSEDSSIGDVDLEGMLGNSVR
GEWVEEEVTSTHNALEEEVTEDTAGTSEGGHMYMFEGKDYSKEPAATDKDKEAFDNLISV
EVAEQEDDLQLPRALRKNRSVRDMPEISLHERMKKEYTPQELEERKRKREEAASKRAEAA
AKRAKLMEEAEVRRAQERRQKLEALWASNDYESVNIAMETDDEDEDEEDDTMTLEDDNDV
KAIQYVSGDVTQPINTGDNDAIVVHCVDDSGSWGTGGLFTALHRRSDQPETQYELAGKMK
DLALGDAHLISIDDKISRTNGSDKVALIVAQHRDRRNNLSGIKLSALDQGLQRVYRAAKK
CNGSVHLPRIGYATAGFNWYGTERLIRKLLASKGIPTYVYYFPRRRGKHRPTTSPATHPK
PSSTTPSLDASAPSTSRVSTSSSSSTQGDDGTGLPSFFRGVTVSFCDVDDGDLKKLTRYV
VAYDGDVSETVDETTTHIVAKEDTSEVQTLLDMKASNPDAVVVSTRWLQDCIAKQSHINE
EKYKL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggacaggattcgtcggaaaataaaggaggttggtgaagccaagaatgttgaaaaggtc
tacgtcgatggaaaagcaatgacaaagttcggtctttcaggaataacgtaccgcccatac
cagttggacggtgtaaattggatgatacagcgttaccatagaaaccatggctgcatcctc
ggcgatgagatgggattgggcaaaacgtgtcagactattggccttttgacgtacctgttt
ggttcgggagaaagtcaggggaagtatttagtcgtcagccctctgtctgtgatgggaaac
tggagagatgagtttgaaagattttcaccgaatctgaagtgtatcgtgtacatgggcgat
aaggaaactcgtgcagctatgcggagtgaaatcaaacattccaaatggcaagttctgatg
acaacatatgagctttgtatgaacgacgcatcattcttgcagagctacgactgggaagtt
ctcgtcgtggatgaagcacatcgtctcaagaaccacaactcactccttcatcagaccctc
aaagaatttaccattggccaccatctgctcttgactggaacgccggtgcagaataacctg
acggagctgtactctcttctgtccttcgttgctcctcgtgtcttcaggaggaccctcaaa
gacgacttcttagaggagtatgaagacgtcacggaggacgaagttaaaaatgatctgcac
tctgtgctgcttcccttcttgctgcgaagaaccaagaatgaagtggtcctggacattcca
aagaagtctgaggtgattctttatcatggcctatcagctctacagaagaatttatacaag
gcagtcttgactaaagattacgaagcgtttcgtcaggcggatccgtggagtcagaaacca
aagacgagactcatgaatgtacttgttcagctccgcaaagttgtcaaccacccctacctc
tttgatggtgttgagccggaaccattcgagctcggcgagcaccttgtggagagtagcggc
aagcttcacctcctggaccagctactagtgttcctgcatcagcgcaatcacaaagtcctt
ctcttctctcagatgacacgggtactagacatcctacaggactatctgggctacagaggg
tactcttatgagcgcttggacggctccgtccgaagcgaggaacgattctcagccattagg
aatttcaacgagcacgacgagacgttcgcctttctgctgagtaccaaagccgggggtcaa
gggttaaacctcgtggctgctgatacggtcatcttcgtggacagtgacttcaatcctcag
aatgacctccaggctgcagctagagcacacaggataggtcaaacaaggccagtcaagata
attcgtctggttggacgagactcagtcgaggaggttatcctaaagagagcggacgctaaa
ctgaagctgactaacacggtgatagagggcggcaaattctcacttggtggagtcggtcct
gctgaaaatgcaactcagctttcggagatgctcaagtttggattggataagctcctccaa
tcagaagacagcagcatcggtgacgtggacttggagggcatgctgggtaatagcgtcaga
ggagagtgggttgaggaagaggtgacctctacccacaatgcattggaagaggaagtgacg
gaggatactgcggggacttctgaaggcggtcacatgtatatgtttgaaggaaaggattac
tccaaagaaccggcagcgacggataaagacaaggaggcgtttgacaatcttatctcagtt
gaggtagccgaacaagaagatgatctgcagttgccccgagcactgcggaagaacagaagc
gtgagagacatgcctgaaatttctctccatgaacgaatgaagaaagaatacacaccgcag
gaacttgaagaaaggaaaagaaagagagaagaggctgcatctaagagggcagaggcggcc
gccaagagggctaagctaatggaagaggcagaggttcggagagcccaagaaagacgacag
aaactggaggcattatgggcatccaatgattacgagtccgtcaacatcgccatggaaacg
gatgacgaagatgaggatgaggaagacgacactatgacgctggaagatgacaatgacgtc
aaagccatccagtacgtcagtggggacgtcactcaaccgattaatactggggacaatgac
gccattgttgtacattgtgttgacgacagtggttcttggggtacagggggcctcttcact
gccttacacaggaggtcagaccagcctgagacgcagtacgagctagcgggcaaaatgaaa
gatttagctcttggggatgctcacttaatcagcattgatgataagataagtcgcaccaat
ggtagcgataaggttgcattgatcgtagctcaacacagagacagacgtaacaatctatct
ggtatcaaattatccgctctggaccaaggccttcagagggtgtacagagctgctaagaaa
tgcaatggaagtgttcatctaccacgtattggttacgcaacggcaggcttcaactggtat
ggtactgaacgactcatacgaaagctgctagcatctaaaggcattccaacatacgtatat
tattttccaagacgaagaggaaagcatcgcccaaccaccagcccagccacgcaccctaag
ccttcatcaactaccccctcgcttgacgcatcagctccttcaacctcgagggtatctaca
tcatcatcatcatccacccaaggagatgacgggacaggactgcccagtttctttcgaggg
gtgacagtgagcttctgtgatgttgacgacggggatttaaagaaactcacacgctatgtt
gtggcttatgatggtgatgtctcagagactgttgatgaaacaacgacccacattgtggcc
aaggaagacacgtcagaggttcaaactctgctggatatgaaggcatcaaatcccgacgct
gtggtcgtgtcaactagatggcttcaagactgtatcgcaaaacagagtcacatcaatgaa
gagaaatataaactttga
DBGET
integrated database retrieval system
