Asterias amurensis (Northern Pacific seastar): 139952902
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Entry
139952902 CDS
T10870
Name
(RefSeq) polycystin-2-like protein 1 isoform X1
KO
K04986
polycystin 2
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamu03037
]
139952902
04040 Ion channels [BR:
aamu04040
]
139952902
Cilium and associated proteins [BR:
aamu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139952902
Ion channels [BR:
aamu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139952902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_1
EF-hand_7
Fer4_24
EF-hand_6
NACHT_N
Motif
Other DBs
NCBI-GeneID:
139952902
NCBI-ProteinID:
XP_071808290
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All DBs
Position
21:5686760..5716076
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AA seq
1051 aa
AA seq
DB search
MASRRVSPRPISSGSTAAGRLTPRDEHEMDQIMEDEVQRRPSSSASRQAWSDNDGFDMGS
EEKGNYGQDFDDQDEEDKVHAPTAMESELYVGGEIRTIDPKVAKQKAEQAKAGCFTKIKR
GIRSLWRTRQTDDTKQDKELHVKTTLRELIIYLVFLLFLCLMTFGMTNSNMYYYTKVMSE
LFLDSQFPDTKNTFRGMTTMTDFWRFAETPLMDGLYWDKWYNDENVTDDARGYIFYENKL
LGVPRIRQLKVTNSSCVVHSDFRDDIKQCYAPYSESVEDKQAFGLMNGTAWEYSSEEELD
GSGHKGKLGPNYSGGGYYVDLSHFRLRSQAIIDELKENLWLDRGTRVVIIDFSVYNANIN
LFCIVRLVVEYPPTGGAIPSWTFRTVRLLRYVTAFDYFIMACEGIFALFILYYIVEEILE
IKRHRFAYFKSTWNCLDVIIIIVSVMCMGFYVYRSMSVSNMIDVLLSQPDQYADFEFLGY
CQAVYNNVVAVVVFLAWIKVFKYISFNKTMNQLSSTLSRCAKDVGGFTIMFLIIFLAYAQ
LGYLLFGTQIKDFSTVENCIYTLFRIVLGDFNFHELEEAERALGPIFFMTYVFVVFFVLL
NMFLAIINDTYSEVKADIANQKSEFEISDYFKKGYEKMVGKLNFKRDKIADIQEALAHAD
ANADQHLDFDEWRHELKCRGHADAEIEAVFAKYDVDGDRILDAEEQMKMAADLEGQKTDL
NNQLAELEEAQITTSNAPPARSKSRVSFNDGLDSEDGDSNGGGRGGVGGVSYEEFVVLSR
RVDRMEHSIGSIVSKIDAVLVKLEAMERAKLKRRETMGKLLDSITEEREVKQAYKTTMNM
QSRSGSSASSYSEYADDEDETGGGNKREQMERLVREELERWDSDASFSQSSGRAGSRGGS
AQRSRPGSSASQRINIGNNSSRTSTSMSRAAPSRQSEVTSPVSRSGSTMSRQSSVSRQSV
VSPRPQTSVSQVSVDVEVNVPPDDDDVFEKARAASVAKSRASSRAASSRATSSRATSSTS
TVTSRNFSPRSDSVVSSKSSVDDDSDDDDEV
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaggcgggtaagtccgcgaccaatatccagtggttcgactgctgccgggcga
ctgacgccaagagacgaacatgagatggatcaaatcatggaggatgaggtgcaaagacga
ccgtctagctcagcctctcggcaggcttggagtgacaacgatggttttgacatggggagc
gaagagaagggaaattatggtcaagatttcgacgaccaagatgaagaggataaggttcat
gctcccaccgccatggaaagcgagttgtacgtcggcggtgaaattcgtaccatcgacccc
aaagtagcaaagcagaaggcggaacaggcaaaagcgggatgcttcaccaagataaagaga
ggaataagatctctttggcggactcggcagacggatgacactaaacaagataaagagctt
catgttaagaccaccctgagagagctgattatttacctggtgtttctgctctttttgtgt
ttgatgactttcggcatgacaaactccaacatgtattactacaccaaggtgatgtcagag
cttttcctggactcccaattccctgacaccaagaatactttccgtggaatgacaacaatg
actgatttctggcgctttgcagaaactccactgatggacggcctgtactgggacaaatgg
tacaatgatgagaacgtaaccgacgatgcacgagggtacatcttctacgagaataaactc
ctcggagtgccacgtatccgacaactaaaggtgaccaactcctcgtgtgtggtccacagc
gatttcagagacgacatcaagcagtgttacgcgccgtactcggagagtgtcgaagataaa
caagcatttgggcttatgaatggcactgcatgggagtacagttccgaggaagagcttgac
ggctcggggcacaaggggaagctgggtcccaactacagcggcggaggttactacgtggat
ttgagccatttcagactccggagccaagccatcattgatgagctgaaggagaatctatgg
cttgaccgaggaacgagagtcgtcatcatagatttctcggtctacaacgccaacatcaat
ctgttttgcatcgtgcgactggtagttgaatacccaccaactggtggcgctattccatct
tggacattccgcacagttcggctcctccgctacgtcactgcctttgactatttcatcatg
gcttgcgagggtatctttgctctcttcatcttgtactacatcgtggaagagatcttggag
attaagaggcatcggttcgcctacttcaagagcacctggaactgcttggatgtcatcatc
atcattgtgtctgtgatgtgtatgggcttctacgtttaccgttccatgagtgtgagtaac
atgatagacgttctcctgtctcaaccggatcagtatgccgactttgagtttctcggctac
tgtcaagccgtctataataacgtcgttgctgtggtggttttcctcgcttggattaaggtt
ttcaagtacatcagcttcaacaagacgatgaatcagctgtcttcaactctgtctcgctgc
gccaaggatgtcggaggattcaccatcatgttcctcatcatcttcttggcctacgcccag
ctcggctatttgctctttggcacacagatcaaggatttcagcaccgtcgaaaactgcatt
tacactctgttccgcattgttcttggtgatttcaacttccatgagctggaggaagcagag
cgtgccctcggtccgatattcttcatgacatatgtgtttgtcgtcttcttcgtgttgttg
aacatgttcttggccatcatcaacgacacttacagcgaggtcaaggcggacattgccaac
cagaagtccgagtttgagatctctgactacttcaagaagggctacgagaagatggtcggc
aaactgaacttcaagcgagacaagatcgccgacattcaggaggctctcgcccatgctgac
gctaacgcagatcagcatctagactttgatgagtggcgccatgagttgaagtgccgtggc
catgcagatgctgagatcgaggcggtgtttgccaaatacgatgttgatggtgatcgcatc
ttagatgccgaggagcagatgaagatggctgctgacttggaaggacagaagacggacctc
aacaaccagctcgctgaactggaagaggcgcagattactacctccaatgctcctcctgca
cggagcaagagccgtgtcagcttcaacgatggactggacagcgaagacggtgactccaat
ggtggagggcgtggtggtgtaggcggggtctcctacgaggagtttgttgtattgagccga
cgtgtggaccgtatggagcattccatcggaagcatcgtgtctaagattgacgctgtcctc
gtcaagcttgaggccatggagagggccaagctgaagcgccgtgagaccatgggcaaactt
cttgatagcatcacagaggagcgagaggtcaaacaggcctataaaaccaccatgaacatg
cagtcgaggtctggttcctcggcttctagctacagtgaatatgctgatgatgaggacgag
accggcggaggcaacaaacgcgagcagatggagcgtttggtccgcgaggaattggaacgt
tgggactctgacgcctccttctcacagagtagcggtagagcagggagtcgaggtggcagt
gcccaacgctctcgaccgggaagctctgcttcacagaggatcaacatcgggaataattcg
agcagaacatccacgagcatgtcgagggctgcgccaagtcgtcaatctgaggttacctca
ccagtgagtcgatcaggatcaacgatgtcgagacaatcctcagtgtctaggcaatcagtc
gtgtccccgagacctcagacgagtgtgtctcaggtttcggtggacgttgaggtcaacgtc
cctccagatgacgatgacgtctttgagaaggcgagagcggccagtgtggctaaatctcgc
gcctcgtccagagccgcatcatcgagggcaacttcctcaagggcgacctcctcaacctcc
actgtcacttcaagaaacttcagtccgcgatcagactctgttgtctccagtaaatcctca
gtggatgatgattcagatgatgatgatgaagtttag
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integrated database retrieval system
