Asterias amurensis (Northern Pacific seastar): 139952955
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Entry
139952955 CDS
T10870
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139952955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139952955
Spliceosome [BR:
aamu03041
]
Complex B
Other components
Prp19-related factors
139952955
Complex C
139952955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH_4
RRM_3
RRM_YTH1
zf-CCCH
RRM_PARP14_3
zf-CCCH_10
zf-CCCH_12
Zn_ribbon_6
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
139952955
NCBI-ProteinID:
XP_071808393
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Position
21:complement(1606747..1612337)
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AA seq
503 aa
AA seq
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MAASKSTNTYNRQNWEEADFPILCQTCLGDNPYIRMTKEKFGRECKICDRPFTIFRWCPG
ARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPIQVRDAALNIKDEMPKSEVNKEYYSQN
IERQIANVDGIAAPGAVGKSQAPSDLLMKLARTTPYYKRNRPHICSFWVKGECRRGEECP
YRHERPTDPDDPLADQNIKDRFYGANDPVAEKLMRRADAMPKLEPPDDKNVTTLYVGGLG
DKVTEENLRNHFYQFGEIRSINVVQKQQCAFVTFTARSSAEQAADLSFQKLILKGRRLNV
KWGKSQGQQGTVAKMPLKGMAEQHYEPVPGLPGALPLPPVPADGSSSNNFFNLEEDTHQL
PPLPHGPPGAMGPPGAMGPPGGGMPRGPPGRMPRGPPPHMMRHQQPPPPGAFGFAPPPPF
PPPPGFHGRPPFHPGARPPPPGGRPPPPGMRPPGMRPPPPAGRPPPPAGRPPMGNRPQGQ
GVHYPSQDPQRMGTAGPDTTAKE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagcaaaagcacgaacacgtacaaccggcaaaactgggaagaagcggacttt
ccgattctttgccagacatgtctcggagacaacccatacatccgcatgaccaaagagaag
tttggaagggaatgtaagatttgcgatcgtcccttcaccatcttccgttggtgtcccggt
gcccgcatgcgattcaagaagacagaagtgtgtcaaacatgtagcaagatcaagaatgtc
tgtcaaacatgcctcctggatctggagtatggattgcctatacaagtaagagacgctgca
ctgaacatcaaagatgaaatgcccaaatcggaggtgaacaaggagtactactcacaaaac
attgaaagacagattgcaaacgttgacggcattgcagcacctggggccgtcggtaagtca
caggcaccgagtgacttgctgatgaagctcgctcggaccacaccctactacaagaggaac
cgacctcatatctgctccttctgggtcaaaggagaatgccgaagaggagaggagtgcccg
tacagacacgagaggccaaccgacccagatgatcccctggccgatcagaacatcaaggac
cgtttctacggagctaacgacccggtggccgagaagctgatgcgccgtgctgatgccatg
ccgaagctggaaccaccagacgataagaacgttacaacattgtacgtcggtggtctggga
gataaagtcactgaagaaaatctcagaaaccacttctaccaatttggagagatccgctca
atcaacgtagtccagaagcagcagtgtgcctttgtgacgttcacagcccgctcttcagca
gagcaagcagccgacttgtcctttcagaaactcatcctcaaaggtcggaggttaaatgtc
aagtggggcaagtcacaaggtcagcagggcactgtggctaagatgccactaaagggcatg
gccgagcagcattacgagcctgtaccaggactgcctggggctttaccgttgccgcccgtc
ccagccgacggatcatcaagcaacaacttcttcaaccttgaagaggatacacaccagttg
cccccgttgccgcatggaccaccaggtgccatgggacctcctggtgccatgggacccccg
ggtggtggtatgcctagagggccaccgggtagaatgccgaggggtccaccgccccatatg
atgcgccaccagcaaccgccccctccaggagcatttgggtttgcaccgccgccacccttc
cctccaccacctggattccacggcagacctcccttccaccccggcgcccgccctccacct
ccagggggacgccctccacccccaggcatgaggcccccgggcatgaggccccctccacca
gcaggcaggccgcctccaccagccggtcgacccccaatgggcaacagacctcagggacaa
ggggtacattatccttcgcaggatccacagcgcatgggcacagcaggccctgatacaact
gccaaggaatag
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